RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 GCOM2Q9BZD3 368 aaPredicted RBP10.3□□□□□ -0.76
SNX1-202ENST00000380285 ANKFY1Q9P2R3 1169 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 CCNL1Q9UK58 526 aaPredicted RBP10.3□□□□□ -0.76
SNX1-202ENST00000380285 CDC42BPBQ9Y5S2 1711 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 NEO1Q92859 1461 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 TRPM1Q7Z4N2 1603 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 TAC1P20366 129 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 CAPN12Q6ZSI9 719 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 KIRREL3Q8IZU9 778 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.3□□□□□ -0.764e-8■■■■■ 48
SNX1-202ENST00000380285 ZFP69BQ9UJL9 534 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.3□□□□□ -0.76
SNX1-202ENST00000380285 GSTA4O15217 222 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 PHKG2P15735 406 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 CXCR5P32302 372 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 MXI1P50539 228 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 TBC1D1Q86TI0 1168 aaPredicted RBP10.3□□□□□ -0.76
SNX1-202ENST00000380285 NLRP14Q86W24 1093 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 KCTD6Q8NC69 237 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 DACT3Q96B18 629 aaPredicted RBP10.3□□□□□ -0.76
SNX1-202ENST00000380285 CCDC127Q96BQ5 260 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 CHMP6Q96FZ7 201 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 KPNA7A9QM74 516 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 M0R2C6 588 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 ICA1Q05084 483 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 E2F4Q16254 413 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 SYDE1Q6ZW31 735 aaPredicted RBP10.29□□□□□ -0.76
SNX1-202ENST00000380285 SDR42E1Q8WUS8 393 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 NUDCD1Q96RS6 583 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 MMS19Q96T76 1030 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 ELAC2Q9BQ52 826 aaKnown RBP10.29□□□□□ -0.76
SNX1-202ENST00000380285 KLC2Q9H0B6 622 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 FGGP02679 453 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 PLCG1P19174 1290 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 EEF1B2P24534 225 aaKnown RBP10.29□□□□□ -0.76
SNX1-202ENST00000380285 HDAC4P56524 1084 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 DARS2Q6PI48 645 aaKnown RBP10.29□□□□□ -0.76
SNX1-202ENST00000380285 DEPDC1BQ8WUY9 529 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 KLC4Q9NSK0 619 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 PAMP19021 973 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 GRAMD1BQ3KR37 738 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 OSBPL9Q96SU4 736 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.29□□□□□ -0.763e-7■■□□□ 11.8
SNX1-202ENST00000380285 H0YIN7 160 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 CCDC22O60826 627 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 PABPC4Q13310 644 aaKnown RBP eCLIP10.29□□□□□ -0.762e-6■■■■■ 31.5
SNX1-202ENST00000380285 LRIG3Q6UXM1 1119 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 CMTR1Q8N1G2 835 aaKnown RBP10.29□□□□□ -0.76
SNX1-202ENST00000380285 MAML1Q92585 1016 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 POLR3CQ9BUI4 534 aaPredicted RBP10.29□□□□□ -0.76
SNX1-202ENST00000380285 KIAA1586Q9HCI6 787 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 TOM1L1O75674 476 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 GFPT2O94808 682 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 KRT10P13645 584 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 PPARGP37231 505 aaPredicted RBP10.29□□□□□ -0.76
SNX1-202ENST00000380285 ARHGDIAP52565 204 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 IFRD2Q12894 506 aaPredicted RBP10.29□□□□□ -0.76
SNX1-202ENST00000380285 IQCB1Q15051 598 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 TAF1BQ53T94 588 aaPredicted RBP10.29□□□□□ -0.76
SNX1-202ENST00000380285 SLFN13Q68D06 897 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 SLFN12LQ6IEE8 588 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 CPXCR1Q8N123 301 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 ABTB1Q969K4 478 aaPredicted RBP10.29□□□□□ -0.76
SNX1-202ENST00000380285 RPS6KC1Q96S38 1066 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 CYP26B1Q9NR63 512 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 PVALEFA0A1B0GWK0 134 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 ACAD11Q709F0 780 aa10.29□□□□□ -0.76
SNX1-202ENST00000380285 ESYT2A0FGR8 921 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 TESPA1A2RU30 521 aaPredicted RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 COPEO14579 308 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 PDCLQ13371 301 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 DLGAP5Q15398 846 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 CAPRIN2Q6IMN6 1127 aaKnown RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 ZNF589Q86UQ0 364 aaPredicted RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 PSPC1Q8WXF1 523 aaKnown RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 MLXIPQ9HAP2 919 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 ATP8B3O60423 1300 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 IGSF1Q8N6C5 1336 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 RASA4BC9J798 803 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 RASA4O43374 803 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 SLC26A4O43511 780 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 PPARDQ03181 441 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 THOC5Q13769 683 aaKnown RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 PPP1R18Q6NYC8 613 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 TOGARAM2Q6ZUX3 1019 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 TBCKQ8TEA7 893 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 FAM129AQ9BZQ8 928 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 FRMPD2Q68DX3 1309 aaPredicted RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 MYBL1P10243 752 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 KCNA6P17658 529 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 UNC5CLQ8IV45 518 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 FMR1NBQ8N0W7 255 aaPredicted RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 GDAP1Q8TB36 358 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 PREX2Q70Z35 1606 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 PLA2G4BP0C869 781 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 SESTD1Q86VW0 696 aa10.28□□□□□ -0.76
SNX1-202ENST00000380285 SMYD4Q8IYR2 804 aaPredicted RBP10.28□□□□□ -0.76
SNX1-202ENST00000380285 CEP19Q96LK0 163 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms