RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 PCDHA12Q9UN75 941 aa22.56■■□□□ 1.2
RER1-204ENST00000378518 TRIP12Q14669 1992 aaPredicted RBP22.56■■□□□ 1.2
RER1-204ENST00000378518 LTBP2Q14767 1821 aa22.55■■□□□ 1.2
RER1-204ENST00000378518 C17orf102A2RUQ5 167 aa22.55■■□□□ 1.2
RER1-204ENST00000378518 OR52Z1P0C646 297 aa22.55■■□□□ 1.2
RER1-204ENST00000378518 SMIM10L2AP0DMW4 78 aa22.55■■□□□ 1.2
RER1-204ENST00000378518 SMIM10L2BP0DMW5 78 aa22.55■■□□□ 1.2
RER1-204ENST00000378518 GNAT1P11488 350 aa22.55■■□□□ 1.2
RER1-204ENST00000378518 PDXDC2PQ6P474 469 aa22.55■■□□□ 1.2
RER1-204ENST00000378518 FERMT3Q86UX7 667 aa22.55■■□□□ 1.2
RER1-204ENST00000378518 TRPV6Q9H1D0 765 aa22.55■■□□□ 1.2
RER1-204ENST00000378518 TRMT13Q9NUP7 481 aaKnown RBP22.55■■□□□ 1.2
RER1-204ENST00000378518 VAV3Q9UKW4 847 aa22.55■■□□□ 1.2
RER1-204ENST00000378518 ZMYND8Q9ULU4 1186 aaPredicted RBP22.55■■□□□ 1.2
RER1-204ENST00000378518 PDE4DIPQ5VU43 2346 aa22.54■■□□□ 1.2
RER1-204ENST00000378518 SYN1P17600 705 aa22.54■■□□□ 1.2
RER1-204ENST00000378518 TXKP42681 527 aa22.54■■□□□ 1.2
RER1-204ENST00000378518 TOB1P50616 345 aaPredicted RBP22.54■■□□□ 1.2
RER1-204ENST00000378518 PTGISQ16647 500 aa22.54■■□□□ 1.2
RER1-204ENST00000378518 NCAPH2Q6IBW4 605 aa22.54■■□□□ 1.2
RER1-204ENST00000378518 GDF6Q6KF10 455 aaPredicted RBP22.54■■□□□ 1.2
RER1-204ENST00000378518 B3GNT9Q6UX72 402 aa22.54■■□□□ 1.2
RER1-204ENST00000378518 CKAP2LQ8IYA6 745 aa22.54■■□□□ 1.2
RER1-204ENST00000378518 MTMR9Q96QG7 549 aa22.54■■□□□ 1.2
RER1-204ENST00000378518 RNPEPQ9H4A4 650 aa22.54■■□□□ 1.2
RER1-204ENST00000378518 TTC12Q9H892 705 aaPredicted RBP22.54■■□□□ 1.2
RER1-204ENST00000378518 GABBR1Q9UBS5 961 aa22.54■■□□□ 1.2
RER1-204ENST00000378518 TRPC6Q9Y210 931 aa22.54■■□□□ 1.2
RER1-204ENST00000378518 MTMR6Q9Y217 621 aa22.54■■□□□ 1.2
RER1-204ENST00000378518 PCDHB6Q9Y5E3 794 aa22.54■■□□□ 1.2
RER1-204ENST00000378518 LAD1O00515 517 aa22.53■■□□□ 1.2
RER1-204ENST00000378518 PPFIA1Q13136 1202 aa22.53■■□□□ 1.2
RER1-204ENST00000378518 NBR1Q14596 966 aa22.53■■□□□ 1.2
RER1-204ENST00000378518 TMEM266Q2M3C6 531 aa22.53■■□□□ 1.2
RER1-204ENST00000378518 CCDC155Q8N6L0 562 aa22.53■■□□□ 1.2
RER1-204ENST00000378518 ATP6V0A1Q93050 837 aa22.53■■□□□ 1.2
RER1-204ENST00000378518 FAM167AQ96KS9 214 aa22.53■■□□□ 1.2
RER1-204ENST00000378518 TMEM60Q9H2L4 133 aa22.53■■□□□ 1.2
RER1-204ENST00000378518 ZSCAN16Q9H4T2 348 aaPredicted RBP22.53■■□□□ 1.2
RER1-204ENST00000378518 MAFBQ9Y5Q3 323 aaPredicted RBP22.53■■□□□ 1.2
RER1-204ENST00000378518 NRCAMQ92823 1304 aa22.53■■□□□ 1.2
RER1-204ENST00000378518 IGSF9BQ9UPX0 1349 aa22.53■■□□□ 1.2
RER1-204ENST00000378518 POTEB3A0JP26 581 aa22.52■■□□□ 1.2
RER1-204ENST00000378518 KIAA0355O15063 1070 aa22.52■■□□□ 1.2
RER1-204ENST00000378518 DKC1O60832 514 aaKnown RBP eCLIP22.52■■□□□ 1.2
RER1-204ENST00000378518 RAG1P15918 1043 aa22.52■■□□□ 1.2
RER1-204ENST00000378518 PLCB4Q15147 1175 aa22.52■■□□□ 1.2
RER1-204ENST00000378518 POTEBQ6S5H4 581 aa22.52■■□□□ 1.2
RER1-204ENST00000378518 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.52■■□□□ 1.2
RER1-204ENST00000378518 TBX21Q9UL17 535 aa22.52■■□□□ 1.2
RER1-204ENST00000378518 H0YGN5 161 aa22.51■■□□□ 1.19
RER1-204ENST00000378518 HBP1O60381 514 aa22.51■■□□□ 1.19
RER1-204ENST00000378518 RESTQ13127 1097 aa22.51■■□□□ 1.19
RER1-204ENST00000378518 PTGDRQ13258 359 aa22.51■■□□□ 1.19
RER1-204ENST00000378518 EPHA7Q15375 998 aa22.51■■□□□ 1.19
RER1-204ENST00000378518 SH3RF1Q7Z6J0 888 aa22.51■■□□□ 1.19
RER1-204ENST00000378518 ATP8B4Q8TF62 1192 aa22.51■■□□□ 1.19
RER1-204ENST00000378518 BBXQ8WY36 941 aaPredicted RBP22.51■■□□□ 1.19
RER1-204ENST00000378518 LBHD1Q9BQE6 289 aaPredicted RBP22.51■■□□□ 1.19
RER1-204ENST00000378518 SETD4Q9NVD3 440 aa22.51■■□□□ 1.19
RER1-204ENST00000378518 TANC1Q9C0D5 1861 aa22.5■■□□□ 1.19
RER1-204ENST00000378518 TRIM43BA6NCK2 446 aa22.5■■□□□ 1.19
RER1-204ENST00000378518 RRN3P2A6NIE6 340 aa22.5■■□□□ 1.19
RER1-204ENST00000378518 EML1O00423 815 aa22.5■■□□□ 1.19
RER1-204ENST00000378518 HOXC8P31273 242 aa22.5■■□□□ 1.19
RER1-204ENST00000378518 BFSP2Q13515 415 aa22.5■■□□□ 1.19
RER1-204ENST00000378518 GRIK4Q16099 956 aa22.5■■□□□ 1.19
RER1-204ENST00000378518 LMBR1Q8WVP7 490 aa22.5■■□□□ 1.19
RER1-204ENST00000378518 TRIM43Q96BQ3 446 aaPredicted RBP22.5■■□□□ 1.19
RER1-204ENST00000378518 HIPK3Q9H422 1215 aa22.5■■□□□ 1.19
RER1-204ENST00000378518 CEP131Q9UPN4 1083 aa22.5■■□□□ 1.19
RER1-204ENST00000378518 COL1A2P08123 1366 aa22.5■■□□□ 1.19
RER1-204ENST00000378518 BMP15O95972 392 aa22.49■■□□□ 1.19
RER1-204ENST00000378518 CYP2C9P11712 490 aa22.49■■□□□ 1.19
RER1-204ENST00000378518 INSRRP14616 1297 aa22.49■■□□□ 1.19
RER1-204ENST00000378518 PSMC5P62195 406 aa22.49■■□□□ 1.19
RER1-204ENST00000378518 SPIRE1Q08AE8 756 aa22.49■■□□□ 1.19
RER1-204ENST00000378518 PTK7Q13308 1070 aa22.49■■□□□ 1.19
RER1-204ENST00000378518 NEK9Q8TD19 979 aa22.49■■□□□ 1.19
RER1-204ENST00000378518 RAB34Q9BZG1 259 aa22.49■■□□□ 1.19
RER1-204ENST00000378518 PPP1R12CQ9BZL4 782 aa22.49■■□□□ 1.19
RER1-204ENST00000378518 NRBP2Q9NSY0 501 aa22.49■■□□□ 1.19
RER1-204ENST00000378518 TIMP1P01033 207 aa22.48■■□□□ 1.19
RER1-204ENST00000378518 OATP04181 439 aa22.48■■□□□ 1.19
RER1-204ENST00000378518 P4HBP07237 508 aaKnown RBP22.48■■□□□ 1.19
RER1-204ENST00000378518 PRPHP41219 470 aa22.48■■□□□ 1.19
RER1-204ENST00000378518 TECP42680 631 aa22.48■■□□□ 1.19
RER1-204ENST00000378518 QARSP47897 775 aaKnown RBP22.48■■□□□ 1.19
RER1-204ENST00000378518 IGBP1P78318 339 aa22.48■■□□□ 1.19
RER1-204ENST00000378518 PRKCEQ02156 737 aa22.48■■□□□ 1.19
RER1-204ENST00000378518 UGCGQ16739 394 aa22.48■■□□□ 1.19
RER1-204ENST00000378518 ZNF484Q5JVG2 852 aa22.48■■□□□ 1.19
RER1-204ENST00000378518 PRPF38BQ5VTL8 546 aaKnown RBP22.48■■□□□ 1.19
RER1-204ENST00000378518 C4orf32Q8N8J7 132 aa22.48■■□□□ 1.19
RER1-204ENST00000378518 BANK1Q8NDB2 785 aa22.48■■□□□ 1.19
RER1-204ENST00000378518 ERMNQ8TAM6 284 aa22.48■■□□□ 1.19
RER1-204ENST00000378518 CAGE1Q8TC20 777 aa22.48■■□□□ 1.19
RER1-204ENST00000378518 NOC4LQ9BVI4 516 aaKnown RBP22.48■■□□□ 1.19
RER1-204ENST00000378518 TUBE1Q9UJT0 475 aa22.48■■□□□ 1.19
RER1-204ENST00000378518 POTEMA6NI47 508 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms