RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 PIK3R5Q8WYR1 880 aa22.36■■□□□ 1.17
CLN5-201ENST00000377453 RBM17Q96I25 401 aaKnown RBP22.36■■□□□ 1.17
CLN5-201ENST00000377453 GJD4Q96KN9 370 aaPredicted RBP22.36■■□□□ 1.17
CLN5-201ENST00000377453 DNAJC18Q9H819 358 aa22.36■■□□□ 1.17
CLN5-201ENST00000377453 ZEB2O60315 1214 aa22.36■■□□□ 1.17
CLN5-201ENST00000377453 NOP2P46087 812 aaKnown RBP22.36■■□□□ 1.17
CLN5-201ENST00000377453 CRY2Q49AN0 593 aa22.36■■□□□ 1.17
CLN5-201ENST00000377453 TCERG1LQ5VWI1 586 aa22.36■■□□□ 1.17
CLN5-201ENST00000377453 EMBQ6PCB8 327 aa22.36■■□□□ 1.17
CLN5-201ENST00000377453 CATSPER3Q86XQ3 398 aa22.36■■□□□ 1.17
CLN5-201ENST00000377453 RNF10Q8N5U6 811 aaKnown RBP22.36■■□□□ 1.17
CLN5-201ENST00000377453 RBM46Q8TBY0 533 aaKnown RBP22.36■■□□□ 1.17
CLN5-201ENST00000377453 NHSQ6T4R5 1651 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 SLC12A3P55017 1021 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 NNTQ13423 1086 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 CYP2W1Q8TAV3 490 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 LRRC27Q9C0I9 530 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 DHX36Q9H2U1 1008 aaKnown RBP22.35■■□□□ 1.17
CLN5-201ENST00000377453 GDF3Q9NR23 364 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 PLIN4Q96Q06 1357 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 DDR1Q08345 913 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 SLC20A2Q08357 652 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 CDC42EP5Q6NZY7 148 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 SLF2Q8IX21 1173 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 OR2W6PQ8NHA6 318 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 CEP63Q96MT8 703 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 REEP2Q9BRK0 252 aa22.35■■□□□ 1.17
CLN5-201ENST00000377453 GOLGA8KD6RF30 607 aa22.34■■□□□ 1.17
CLN5-201ENST00000377453 EIF3HO15372 352 aaKnown RBP eCLIP22.34■■□□□ 1.17
CLN5-201ENST00000377453 MAGEA9P43362 315 aa22.34■■□□□ 1.17
CLN5-201ENST00000377453 LIG3P49916 1009 aa22.34■■□□□ 1.17
CLN5-201ENST00000377453 GUCY1A3Q02108 690 aa22.34■■□□□ 1.17
CLN5-201ENST00000377453 CAVIN3Q969G5 261 aa22.34■■□□□ 1.17
CLN5-201ENST00000377453 ADAMTSL1Q8N6G6 1762 aa22.34■■□□□ 1.17
CLN5-201ENST00000377453 CDC37Q16543 378 aaPredicted RBP22.34■■□□□ 1.17
CLN5-201ENST00000377453 KSR1Q8IVT5 923 aa22.34■■□□□ 1.17
CLN5-201ENST00000377453 IFT20Q8IY31 132 aa22.34■■□□□ 1.17
CLN5-201ENST00000377453 EDEM3Q9BZQ6 932 aa22.34■■□□□ 1.17
CLN5-201ENST00000377453 PCDHGC5Q9Y5F6 944 aa22.34■■□□□ 1.17
CLN5-201ENST00000377453 CFAP58Q5T655 872 aa22.33■■□□□ 1.17
CLN5-201ENST00000377453 DPY19L2P1Q6NXN4 242 aa22.33■■□□□ 1.17
CLN5-201ENST00000377453 IRF2BP2Q7Z5L9 587 aa22.33■■□□□ 1.17
CLN5-201ENST00000377453 TBC1D22AQ8WUA7 517 aa22.33■■□□□ 1.17
CLN5-201ENST00000377453 RNPC3Q96LT9 517 aaKnown RBP22.33■■□□□ 1.17
CLN5-201ENST00000377453 SPAG5Q96R06 1193 aa22.33■■□□□ 1.17
CLN5-201ENST00000377453 NT5C3AQ9H0P0 336 aa22.33■■□□□ 1.17
CLN5-201ENST00000377453 CENPHQ9H3R5 247 aa22.33■■□□□ 1.17
CLN5-201ENST00000377453 KCNMB3Q9NPA1 279 aa22.33■■□□□ 1.17
CLN5-201ENST00000377453 CETN3O15182 167 aa22.33■■□□□ 1.16
CLN5-201ENST00000377453 CEP104O60308 925 aa22.33■■□□□ 1.16
CLN5-201ENST00000377453 OPA1O60313 960 aa22.33■■□□□ 1.16
CLN5-201ENST00000377453 AKAP3O75969 853 aa22.33■■□□□ 1.16
CLN5-201ENST00000377453 EEF2P13639 858 aaKnown RBP22.33■■□□□ 1.16
CLN5-201ENST00000377453 HOXA13P31271 388 aaPredicted RBP22.33■■□□□ 1.16
CLN5-201ENST00000377453 GIT2Q14161 759 aa22.33■■□□□ 1.16
CLN5-201ENST00000377453 HYIQ5T013 277 aa22.33■■□□□ 1.16
CLN5-201ENST00000377453 CERS3Q8IU89 383 aa22.33■■□□□ 1.16
CLN5-201ENST00000377453 UCHL3P15374 230 aa22.32■■□□□ 1.16
CLN5-201ENST00000377453 SEPT12Q8IYM1 358 aa22.32■■□□□ 1.16
CLN5-201ENST00000377453 KDM3AQ9Y4C1 1321 aa22.32■■□□□ 1.16
CLN5-201ENST00000377453 MEIS2O14770 477 aa22.32■■□□□ 1.16
CLN5-201ENST00000377453 ERVK-9P63128 1117 aa22.32■■□□□ 1.16
CLN5-201ENST00000377453 HLTFQ14527 1009 aaKnown RBP eCLIP22.32■■□□□ 1.16
CLN5-201ENST00000377453 RGL1Q9NZL6 768 aa22.32■■□□□ 1.16
CLN5-201ENST00000377453 AIPL1Q9NZN9 384 aa22.32■■□□□ 1.16
CLN5-201ENST00000377453 BCS1LQ9Y276 419 aa22.32■■□□□ 1.16
CLN5-201ENST00000377453 FAM86B1E9PN63 330 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 ZBTB39O15060 712 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 FAM86B2P0C5J1 330 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 SPATA31C1P0DKV0 1188 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 PON1P27169 355 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 PPP1R18Q6NYC8 613 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 IQCKQ8N0W5 287 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 MICALL1Q8N3F8 863 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 USP38Q8NB14 1042 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 SYN2Q92777 582 aaPredicted RBP22.31■■□□□ 1.16
CLN5-201ENST00000377453 RUSC1Q9BVN2 902 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 ZNF831Q5JPB2 1677 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 ARFGEF1Q9Y6D6 1849 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 TMCO5BA8MYB1 307 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 GDF11O95390 407 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 ITGA4P13612 1032 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 ARHGAP4P98171 946 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 SPIRE1Q08AE8 756 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 PAK2Q13177 524 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 ALS2CLQ60I27 953 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 CERKQ8TCT0 537 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 NEUROG2Q9H2A3 272 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 ARMCX3Q9UH62 379 aaPredicted RBP22.31■■□□□ 1.16
CLN5-201ENST00000377453 PCDHB13Q9Y5F0 798 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 FAM169AQ9Y6X4 670 aa22.31■■□□□ 1.16
CLN5-201ENST00000377453 RPS6KA1Q15418 735 aa22.3■■□□□ 1.16
CLN5-201ENST00000377453 MAATS1Q7Z4T9 603 aa22.3■■□□□ 1.16
CLN5-201ENST00000377453 DDX47Q9H0S4 455 aaKnown RBP22.3■■□□□ 1.16
CLN5-201ENST00000377453 GCFC2P16383 781 aaKnown RBP22.3■■□□□ 1.16
CLN5-201ENST00000377453 GPATCH4Q5T3I0 446 aaKnown RBP22.3■■□□□ 1.16
CLN5-201ENST00000377453 PIGOQ8TEQ8 1089 aa22.3■■□□□ 1.16
CLN5-201ENST00000377453 BHMT2Q9H2M3 363 aa22.3■■□□□ 1.16
CLN5-201ENST00000377453 DDTLA6NHG4 134 aaPredicted RBP22.29■■□□□ 1.16
CLN5-201ENST00000377453 FLT3P36888 993 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms