RNA–Protein interactions for RNA: ENST00000376227.3

CCDC22-201, Transcript of coiled-coil domain containing 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC22, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC22-201ENST00000376227 KCTD1Q719H9 257 aa16.63■□□□□ 0.25
CCDC22-201ENST00000376227 LMBR1Q8WVP7 490 aa16.63■□□□□ 0.25
CCDC22-201ENST00000376227 CCDC17Q96LX7 622 aa16.63■□□□□ 0.25
CCDC22-201ENST00000376227 METTL14Q9HCE5 456 aaKnown RBP16.63■□□□□ 0.25
CCDC22-201ENST00000376227 DNM3Q9UQ16 869 aa16.63■□□□□ 0.25
CCDC22-201ENST00000376227 KCNK3O14649 394 aa16.63■□□□□ 0.25
CCDC22-201ENST00000376227 XRCC5P13010 732 aaKnown RBP16.63■□□□□ 0.25
CCDC22-201ENST00000376227 CUL1Q13616 776 aa16.63■□□□□ 0.25
CCDC22-201ENST00000376227 EXOC3L4Q17RC7 722 aa16.63■□□□□ 0.25
CCDC22-201ENST00000376227 KNOP1Q1ED39 458 aaKnown RBP16.63■□□□□ 0.25
CCDC22-201ENST00000376227 CASKIN2Q8WXE0 1202 aa16.63■□□□□ 0.25
CCDC22-201ENST00000376227 PACSIN1Q9BY11 444 aa16.63■□□□□ 0.25
CCDC22-201ENST00000376227 COA1Q9GZY4 146 aa16.63■□□□□ 0.25
CCDC22-201ENST00000376227 TAF1DQ9H5J8 278 aaPredicted RBP16.63■□□□□ 0.25
CCDC22-201ENST00000376227 PCDHA1Q9Y5I3 950 aa16.63■□□□□ 0.25
CCDC22-201ENST00000376227 FAM169AQ9Y6X4 670 aa16.63■□□□□ 0.25
CCDC22-201ENST00000376227 BTAF1O14981 1849 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 ESYT3A0FGR9 886 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 HMGB1P1B2RPK0 211 aaPredicted RBP16.62■□□□□ 0.25
CCDC22-201ENST00000376227 NDUFAB1O14561 156 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 TBX3O15119 743 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 KRT14P02533 472 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 UCHL3P15374 230 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 RPL13P26373 211 aaKnown RBP16.62■□□□□ 0.25
CCDC22-201ENST00000376227 SHMT1P34896 483 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 NOP2P46087 812 aaKnown RBP16.62■□□□□ 0.25
CCDC22-201ENST00000376227 PTK2Q05397 1052 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 CALR3Q96L12 384 aaKnown RBP16.62■□□□□ 0.25
CCDC22-201ENST00000376227 MBOAT7Q96N66 472 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 KANSL2Q9H9L4 492 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 USP40Q9NVE5 1235 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 PACSIN2Q9UNF0 486 aaPredicted RBP16.62■□□□□ 0.25
CCDC22-201ENST00000376227 USP17L15C9J2P7 530 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 USP17L13C9JLJ4 530 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 USP17L11C9JVI0 530 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 USP17L18D6R9N7 530 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 USP17L22D6RA61 530 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 USP17L17D6RBQ6 530 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 USP17L19D6RCP7 530 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 USP17L20D6RJB6 530 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 ANKRD65E5RJM6 399 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 PDXKO00764 312 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 ZEB2O60315 1214 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 MED24O75448 989 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 KIF4AO95239 1232 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 FAM153BP0C7A2 387 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 GUCY2FP51841 1108 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 USP17L24Q0WX57 530 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 FAM153CQ494X1 144 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 USP17L6PQ6QN14 398 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 IRF2BP2Q7Z5L9 587 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 ACTRT1Q8TDG2 376 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 NGLY1Q96IV0 654 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 ISCUQ9H1K1 167 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 DDX4Q9NQI0 724 aaKnown RBP16.62■□□□□ 0.25
CCDC22-201ENST00000376227 FAM153AQ9UHL3 310 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 TMEM59LQ9UK28 342 aa16.62■□□□□ 0.25
CCDC22-201ENST00000376227 ZNF233A6NK53 670 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 RAD51CO43502 376 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 SERPINB2P05120 415 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 HSPA9P38646 679 aaKnown RBP16.61■□□□□ 0.25
CCDC22-201ENST00000376227 PDCLQ13371 301 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 QRICH1Q2TAL8 776 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 ARSHQ5FYA8 562 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 EMC10Q5UCC4 262 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 KCTD16Q68DU8 428 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 KLHL7Q8IXQ5 586 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 DCAF4Q8WV16 495 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 LRRC45Q96CN5 670 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 FBXL5Q9UKA1 691 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 MYH10P35580 1976 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 POTEFA5A3E0 1075 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 ZSCAN5CA6NGD5 496 aaPredicted RBP16.61■□□□□ 0.25
CCDC22-201ENST00000376227 F8W031 263 aaPredicted RBP16.61■□□□□ 0.25
CCDC22-201ENST00000376227 SLC16A3O15427 465 aaKnown RBP16.61■□□□□ 0.25
CCDC22-201ENST00000376227 POTEIP0CG38 1075 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 NR1D1P20393 614 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 HOXA10P31260 410 aaPredicted RBP16.61■□□□□ 0.25
CCDC22-201ENST00000376227 PRKCIP41743 596 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 RNASE9P60153 205 aaKnown RBP16.61■□□□□ 0.25
CCDC22-201ENST00000376227 GIT2Q14161 759 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 HLTFQ14527 1009 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCDC22-201ENST00000376227 ALKBH5Q6P6C2 394 aaKnown RBP16.61■□□□□ 0.25
CCDC22-201ENST00000376227 POTEGQ6S5H5 508 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 POTEEQ6S8J3 1075 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 LRIG3Q6UXM1 1119 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 MICALCLQ6ZW33 695 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 ZNF571Q7Z3V5 609 aaPredicted RBP16.61■□□□□ 0.25
CCDC22-201ENST00000376227 MAATS1Q7Z4T9 603 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 SYCE1Q8N0S2 351 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 MICALL1Q8N3F8 863 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 SYT2Q8N9I0 419 aaPredicted RBP16.61■□□□□ 0.25
CCDC22-201ENST00000376227 ATP6V1G3Q96LB4 118 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 CRAMP1Q96RY5 1269 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 NAGPAQ9UK23 515 aa16.61■□□□□ 0.25
CCDC22-201ENST00000376227 FOCADQ5VW36 1801 aa16.6■□□□□ 0.25
CCDC22-201ENST00000376227 ATXN2Q99700 1313 aaKnown RBP16.6■□□□□ 0.25
CCDC22-201ENST00000376227 CCDC188H7C350 402 aa16.6■□□□□ 0.25
CCDC22-201ENST00000376227 PGRMC1O00264 195 aaKnown RBP16.6■□□□□ 0.25
CCDC22-201ENST00000376227 CEP104O60308 925 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms