RNA–Protein interactions for RNA: ENST00000376048.9

PRDM2-204, Transcript of PR/SET domain 2, humanhuman

TSL 2 BASIC

Gene PRDM2, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-204ENST00000376048 CCDC88AQ3V6T2 1871 aa13.09□□□□□ -0.31
PRDM2-204ENST00000376048 CLGNO14967 610 aa13.08□□□□□ -0.31
PRDM2-204ENST00000376048 PPP4CP60510 307 aa13.08□□□□□ -0.31
PRDM2-204ENST00000376048 SF3B2Q13435 895 aaKnown RBP13.08□□□□□ -0.31
PRDM2-204ENST00000376048 NAB2Q15742 525 aa13.08□□□□□ -0.31
PRDM2-204ENST00000376048 UAP1Q16222 522 aaPredicted RBP13.08□□□□□ -0.31
PRDM2-204ENST00000376048 UBE2SQ16763 222 aa13.08□□□□□ -0.31
PRDM2-204ENST00000376048 QPCTQ16769 361 aa13.08□□□□□ -0.31
PRDM2-204ENST00000376048 CCDC40Q4G0X9 1142 aa13.08□□□□□ -0.31
PRDM2-204ENST00000376048 GLE1Q53GS7 698 aaKnown RBP13.08□□□□□ -0.31
PRDM2-204ENST00000376048 MEI1Q5TIA1 1274 aa13.08□□□□□ -0.31
PRDM2-204ENST00000376048 EP400NLQ6ZTU2 488 aa13.08□□□□□ -0.31
PRDM2-204ENST00000376048 KCTD1Q719H9 257 aa13.08□□□□□ -0.31
PRDM2-204ENST00000376048 RUBCNQ92622 972 aa13.08□□□□□ -0.31
PRDM2-204ENST00000376048 RBM17Q96I25 401 aaKnown RBP13.08□□□□□ -0.31
PRDM2-204ENST00000376048 COL24A1Q17RW2 1714 aa13.08□□□□□ -0.32
PRDM2-204ENST00000376048 NPHP3-ACAD11A0A0J9YXS1 232 aa13.08□□□□□ -0.32
PRDM2-204ENST00000376048 SSU72P8A0A1W2PR75 194 aa13.08□□□□□ -0.32
PRDM2-204ENST00000376048 MPHOSPH10O00566 681 aaKnown RBP13.08□□□□□ -0.32
PRDM2-204ENST00000376048 ATP2C2O75185 946 aa13.08□□□□□ -0.32
PRDM2-204ENST00000376048 ACTN1P12814 892 aa13.08□□□□□ -0.32
PRDM2-204ENST00000376048 HSD17B3P37058 310 aa13.08□□□□□ -0.32
PRDM2-204ENST00000376048 GSTO1P78417 241 aa13.08□□□□□ -0.32
PRDM2-204ENST00000376048 CDC37Q16543 378 aaPredicted RBP13.08□□□□□ -0.32
PRDM2-204ENST00000376048 CALCRLQ16602 461 aa13.08□□□□□ -0.32
PRDM2-204ENST00000376048 C16orf86Q6ZW13 317 aa13.08□□□□□ -0.32
PRDM2-204ENST00000376048 KRT25Q7Z3Z0 450 aa13.08□□□□□ -0.32
PRDM2-204ENST00000376048 RNF10Q8N5U6 811 aaKnown RBP13.08□□□□□ -0.32
PRDM2-204ENST00000376048 SNX29Q8TEQ0 813 aa13.08□□□□□ -0.32
PRDM2-204ENST00000376048 CABS1Q96KC9 395 aa13.08□□□□□ -0.32
PRDM2-204ENST00000376048 DDX47Q9H0S4 455 aaKnown RBP13.08□□□□□ -0.32
PRDM2-204ENST00000376048 KDM4CQ9H3R0 1056 aa13.08□□□□□ -0.32
PRDM2-204ENST00000376048 FSBPO95073 299 aa13.07□□□□□ -0.32
PRDM2-204ENST00000376048 IL1R1P14778 569 aa13.07□□□□□ -0.32
PRDM2-204ENST00000376048 GNAQP50148 359 aa13.07□□□□□ -0.32
PRDM2-204ENST00000376048 CCDC13Q8IYE1 715 aa13.07□□□□□ -0.32
PRDM2-204ENST00000376048 USP38Q8NB14 1042 aa13.07□□□□□ -0.32
PRDM2-204ENST00000376048 MTMR9Q96QG7 549 aa13.07□□□□□ -0.32
PRDM2-204ENST00000376048 RBAK-RBAKDNI3L0D1 243 aa13.07□□□□□ -0.32
PRDM2-204ENST00000376048 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
PRDM2-204ENST00000376048 KIAA0825Q8IV33 1275 aa13.07□□□□□ -0.32
PRDM2-204ENST00000376048 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
PRDM2-204ENST00000376048 C6orf50Q9HD87 102 aa13.07□□□□□ -0.32
PRDM2-204ENST00000376048 CEP72Q9P209 647 aa13.07□□□□□ -0.32
PRDM2-204ENST00000376048 ATP6V0A2Q9Y487 856 aa13.07□□□□□ -0.32
PRDM2-204ENST00000376048 SERPING1P05155 500 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 ITGA4P13612 1032 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 ATP2B4P23634 1241 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 LRRC63Q05C16 580 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 ACTN3Q08043 901 aaPredicted RBP13.06□□□□□ -0.32
PRDM2-204ENST00000376048 KLHL30Q0D2K2 578 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 COASYQ13057 564 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 SLC18A3Q16572 532 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 GALNT17Q6IS24 598 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 CCDC91Q7Z6B0 441 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 RAD54LQ92698 747 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 CYFIP2Q96F07 1278 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 CNOT8Q9UFF9 292 aaKnown RBP13.06□□□□□ -0.32
PRDM2-204ENST00000376048 PCDHGC5Q9Y5F6 944 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 COL4A3BPQ9Y5P4 624 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 MYH7BA7E2Y1 1941 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 TAF1LQ8IZX4 1826 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 CEP104O60308 925 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 LDHCP07864 332 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 PDHBP11177 359 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 MAP2K2P36507 400 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 COBLL1Q53SF7 1204 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 MYOCDQ8IZQ8 938 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 MREGQ8N565 214 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 NEDD1Q8NHV4 660 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 ANKS1AQ92625 1134 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 TMBIM4Q9HC24 238 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 PVALEFA0A1B0GWK0 134 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 PPP1R11O60927 126 aaPredicted RBP13.06□□□□□ -0.32
PRDM2-204ENST00000376048 FAM107AO95990 144 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 CTNNA1P35221 906 aaKnown RBP13.06□□□□□ -0.32
PRDM2-204ENST00000376048 PPP1R2P41236 205 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 GSCP56915 257 aaPredicted RBP13.06□□□□□ -0.32
PRDM2-204ENST00000376048 PTK2Q05397 1052 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 ZNF844Q08AG5 666 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 SEMA3FQ13275 785 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 ZCWPW2Q504Y3 356 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 SOGA3Q5TF21 947 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 DNAJC19Q96DA6 116 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 TAF1DQ9H5J8 278 aaPredicted RBP13.06□□□□□ -0.32
PRDM2-204ENST00000376048 CXorf56Q9H5V9 222 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 USP40Q9NVE5 1235 aa13.06□□□□□ -0.32
PRDM2-204ENST00000376048 H0YGN5 161 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 GNA11P29992 359 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 HSPA9P38646 679 aaKnown RBP13.05□□□□□ -0.32
PRDM2-204ENST00000376048 FKBP3Q00688 224 aaKnown RBP13.05□□□□□ -0.32
PRDM2-204ENST00000376048 COL23A1Q86Y22 540 aaPredicted RBP13.05□□□□□ -0.32
PRDM2-204ENST00000376048 CD302Q8IX05 232 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 ZNF622Q969S3 477 aaKnown RBP eCLIP13.05□□□□□ -0.329e-7■■■□□ 17.7
PRDM2-204ENST00000376048 IQCDQ96DY2 449 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 CELF4Q9BZC1 486 aaKnown RBP13.05□□□□□ -0.32
PRDM2-204ENST00000376048 OSBPL7Q9BZF2 842 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 DDX20Q9UHI6 824 aaKnown RBP13.05□□□□□ -0.32
PRDM2-204ENST00000376048 AMACRQ9UHK6 382 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 TSKSQ9UJT2 592 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms