RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 CLP1Q92989 425 aaKnown RBP15.83■□□□□ 0.12
CXCL12-202ENST00000374426 ZBTB10Q96DT7 871 aa15.83■□□□□ 0.12
CXCL12-202ENST00000374426 TTC3P53804 2025 aa15.83■□□□□ 0.12
CXCL12-202ENST00000374426 CCDC69A6NI79 296 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 PRR33A8MZF0 331 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 LTBRP36941 435 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 LIFRP42702 1097 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 CTC1Q2NKJ3 1217 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 TSHZ1Q6ZSZ6 1077 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 RAB11FIP4Q86YS3 637 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 CCDC82Q8N4S0 544 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 LINC01599Q8WXQ3 324 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 ZNF689Q96CS4 500 aaPredicted RBP15.82■□□□□ 0.12
CXCL12-202ENST00000374426 TMEM87BQ96K49 555 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 PCYT2Q99447 389 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 C11orf84Q9BUA3 381 aaPredicted RBP15.82■□□□□ 0.12
CXCL12-202ENST00000374426 LSG1Q9H089 658 aaKnown RBP15.82■□□□□ 0.12
CXCL12-202ENST00000374426 SMARCAD1Q9H4L7 1026 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 AGO3Q9H9G7 860 aaKnown RBP15.82■□□□□ 0.12
CXCL12-202ENST00000374426 CLDND1Q9NY35 253 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 RWDD3Q9Y3V2 267 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 CDY2AQ9Y6F7 541 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 ATG2AQ2TAZ0 1938 aa15.82■□□□□ 0.12
CXCL12-202ENST00000374426 POTEB3A0JP26 581 aa15.81■□□□□ 0.12
CXCL12-202ENST00000374426 SPDYE3A6NKU9 549 aa15.81■□□□□ 0.12
CXCL12-202ENST00000374426 MAFGO15525 162 aa15.81■□□□□ 0.12
CXCL12-202ENST00000374426 ALADP13716 330 aa15.81■□□□□ 0.12
CXCL12-202ENST00000374426 INSRRP14616 1297 aa15.81■□□□□ 0.12
CXCL12-202ENST00000374426 IGBP1P78318 339 aa15.81■□□□□ 0.12
CXCL12-202ENST00000374426 MRPS6P82932 125 aaKnown RBP15.81■□□□□ 0.12
CXCL12-202ENST00000374426 ZP2Q05996 745 aa15.81■□□□□ 0.12
CXCL12-202ENST00000374426 POTEBQ6S5H4 581 aa15.81■□□□□ 0.12
CXCL12-202ENST00000374426 TMTC3Q6ZXV5 915 aa15.81■□□□□ 0.12
CXCL12-202ENST00000374426 LMAN2LQ9H0V9 348 aa15.81■□□□□ 0.12
CXCL12-202ENST00000374426 JADE2Q9NQC1 790 aa15.81■□□□□ 0.12
CXCL12-202ENST00000374426 PCDHA6Q9UN73 950 aa15.81■□□□□ 0.12
CXCL12-202ENST00000374426 PCDHA8Q9Y5H6 950 aa15.81■□□□□ 0.12
CXCL12-202ENST00000374426 SLC27A2O14975 620 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 NCK2O43639 380 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 DGKIO75912 1065 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 CALM1P0DP23 149 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 CALM2P0DP24 149 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 CALM3P0DP25 149 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 CD52P31358 61 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 DLX2Q07687 328 aaPredicted RBP15.8■□□□□ 0.12
CXCL12-202ENST00000374426 HYAL1Q12794 435 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 BTG3Q14201 252 aaPredicted RBP15.8■□□□□ 0.12
CXCL12-202ENST00000374426 RTN4RL1Q86UN2 441 aaPredicted RBP15.8■□□□□ 0.12
CXCL12-202ENST00000374426 CRIPAKQ8N1N5 446 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 LRRC2Q9BYS8 371 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 FAM49AQ9H0Q0 323 aaPredicted RBP15.8■□□□□ 0.12
CXCL12-202ENST00000374426 JPH1Q9HDC5 661 aaPredicted RBP15.8■□□□□ 0.12
CXCL12-202ENST00000374426 KCNH7Q9NS40 1196 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 PRKAG3Q9UGI9 489 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 FAM50BQ9Y247 325 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 SLC12A7Q9Y666 1083 aa15.8■□□□□ 0.12
CXCL12-202ENST00000374426 RRN3P2A6NIE6 340 aa15.79■□□□□ 0.12
CXCL12-202ENST00000374426 C19orf67A6NJJ6 358 aa15.79■□□□□ 0.12
CXCL12-202ENST00000374426 DCXO43602 365 aa15.79■□□□□ 0.12
CXCL12-202ENST00000374426 CAMK1Q14012 370 aa15.79■□□□□ 0.12
CXCL12-202ENST00000374426 HEATR3Q7Z4Q2 680 aa15.79■□□□□ 0.12
CXCL12-202ENST00000374426 ADHFE1Q8IWW8 467 aa15.79■□□□□ 0.12
CXCL12-202ENST00000374426 FANCBQ8NB91 859 aa15.79■□□□□ 0.12
CXCL12-202ENST00000374426 CYP2W1Q8TAV3 490 aa15.79■□□□□ 0.12
CXCL12-202ENST00000374426 ALG13Q9NP73 1137 aaKnown RBP15.79■□□□□ 0.12
CXCL12-202ENST00000374426 SLC9A2Q9UBY0 812 aa15.79■□□□□ 0.12
CXCL12-202ENST00000374426 CSPG5O95196 566 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 MMP1P03956 469 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 RPLP2P05387 115 aaKnown RBP15.78■□□□□ 0.12
CXCL12-202ENST00000374426 GTF2F1P35269 517 aaKnown RBP eCLIP15.78■□□□□ 0.12
CXCL12-202ENST00000374426 PLCB4Q15147 1175 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 NECTIN1Q15223 517 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 CLUL1Q15846 466 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 IER5Q5VY09 327 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 CREB3L3Q68CJ9 461 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 TYW1BQ6NUM6 668 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 SGMS1Q86VZ5 419 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 MICU3Q86XE3 530 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 TRAPPC12Q8WVT3 735 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 MXRA8Q9BRK3 442 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 PLVAPQ9BX97 442 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 AZI2Q9H6S1 392 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 PLAGL2Q9UPG8 496 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 TRPC6Q9Y210 931 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 MRPL42Q9Y6G3 142 aaKnown RBP15.78■□□□□ 0.12
CXCL12-202ENST00000374426 SQORQ9Y6N5 450 aa15.78■□□□□ 0.12
CXCL12-202ENST00000374426 IGSF9BQ9UPX0 1349 aa15.77■□□□□ 0.12
CXCL12-202ENST00000374426 TBX10O75333 385 aa15.77■□□□□ 0.12
CXCL12-202ENST00000374426 IRS1P35568 1242 aa15.77■□□□□ 0.12
CXCL12-202ENST00000374426 ACTR2P61160 394 aa15.77■□□□□ 0.12
CXCL12-202ENST00000374426 IRX6P78412 446 aaPredicted RBP15.77■□□□□ 0.12
CXCL12-202ENST00000374426 TMEM62Q0P6H9 643 aa15.77■□□□□ 0.12
CXCL12-202ENST00000374426 SMAD2Q15796 467 aaKnown RBP15.77■□□□□ 0.12
CXCL12-202ENST00000374426 WWC2Q6AWC2 1192 aa15.77■□□□□ 0.12
CXCL12-202ENST00000374426 PLPPR4Q7Z2D5 763 aa15.77■□□□□ 0.12
CXCL12-202ENST00000374426 P2RX5Q93086 422 aa15.77■□□□□ 0.12
CXCL12-202ENST00000374426 UIMC1Q96RL1 719 aa15.77■□□□□ 0.12
CXCL12-202ENST00000374426 ESYT1Q9BSJ8 1104 aa15.77■□□□□ 0.12
CXCL12-202ENST00000374426 FTHL17Q9BXU8 183 aa15.77■□□□□ 0.12
CXCL12-202ENST00000374426 PADI3Q9ULW8 664 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms