RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 LGALS16A8MUM7 142 aa18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 E7EVH7 732 aa18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 RNASE9P60153 205 aaKnown RBP18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 IFFO1Q0D2I5 559 aa18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 ANKRD20A8PQ5CZ79 823 aa18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 CREG2Q8IUH2 290 aa18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 NSMCE1Q8WV22 266 aa18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 CYFIP2Q96F07 1278 aa18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 MMRN2Q9H8L6 949 aa18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 HPDP32754 393 aaPredicted RBP18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 MDH1P40925 334 aaKnown RBP18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 RPS6KA3P51812 740 aa18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 IFT81Q8WYA0 676 aa18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 TBC1D31Q96DN5 1066 aa18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 MS4A14Q96JA4 679 aa18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 ROBO3Q96MS0 1386 aa18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 E9PMD0 336 aa18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 NR1D1P20393 614 aa18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 EPHB4P54760 987 aa18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 IKQ13123 557 aaPredicted RBP18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 XRCC4Q13426 336 aa18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 BZW1Q7L1Q6 419 aaKnown RBP18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 CALML4Q96GE6 196 aa18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 TANGO6Q9C0B7 1094 aa18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 MEIS1O00470 390 aa18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 BBOX1O75936 387 aa18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 MOCS3O95396 460 aa18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 SHMT1P34896 483 aa18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 DNAAF5Q86Y56 855 aa18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 ZNF507Q8TCN5 953 aa18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 PPANQ9NQ55 473 aaKnown RBP18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.95■□□□□ 0.62
LDLRAP1-201ENST00000374338 DDTLA6NHG4 134 aaPredicted RBP18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 ZNF263O14978 683 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 KRT86O43790 486 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 IPO7O95373 1038 aaKnown RBP18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 CAPRIN2Q6IMN6 1127 aaKnown RBP18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 EMBQ6PCB8 327 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 MMGT1Q8N4V1 131 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 DAGLBQ8NCG7 672 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 SPATA4Q8NEY3 305 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 STAMBPL1Q96FJ0 436 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 CCDC43Q96MW1 224 aaKnown RBP18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 FAM210AQ96ND0 272 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 NUCKS1Q9H1E3 243 aaKnown RBP18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 HOMER3Q9NSC5 361 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 SCTRP47872 440 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 ARID5AQ03989 594 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 SPAG1Q07617 926 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 MYO1EQ12965 1108 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 SV2BQ7L1I2 683 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 DDX12PQ92771 950 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 NHEJ1Q9H9Q4 299 aaPredicted RBP18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 ZNF233A6NK53 670 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 TSR1Q2NL82 804 aaKnown RBP18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 DNAJC18Q9H819 358 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 EBF2Q9HAK2 575 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 NOD2Q9HC29 1040 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 NFU1Q9UMS0 254 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 TRPC6Q9Y210 931 aa18.94■□□□□ 0.62
LDLRAP1-201ENST00000374338 NAV1Q8NEY1 1877 aa18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 ATP6V1G2O95670 118 aa18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 CARSP49589 748 aaKnown RBP18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 IQCEQ6IPM2 695 aa18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 PROCA1Q8NCQ7 364 aaPredicted RBP18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 LARP4BQ92615 738 aaKnown RBP18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 RIOX1Q9H6W3 641 aa18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 NLRC4Q9NPP4 1024 aa18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 RAB27AP51159 221 aa18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 PTPROQ16827 1216 aa18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 MIIPQ5JXC2 388 aa18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 THEMIS2Q5TEJ8 643 aa18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 MIS18BP1Q6P0N0 1132 aa18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 CAVIN3Q969G5 261 aa18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 NUP58Q9BVL2 599 aa18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 DDX25Q9UHL0 483 aaKnown RBP18.93■□□□□ 0.62
LDLRAP1-201ENST00000374338 TTLL1O95922 423 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 PLCG2P16885 1265 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 CCNE1P24864 410 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 APOBEC3HQ6NTF7 200 aaKnown RBP18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 TMC4Q7Z404 712 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 COL23A1Q86Y22 540 aaPredicted RBP18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 C2CD5Q86YS7 1000 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 IQCKQ8N0W5 287 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 CERKQ8TCT0 537 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 MYH1P12882 1939 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 BUB1BO60566 1050 aaPredicted RBP18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 MMP10P09238 476 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 HOXA13P31271 388 aaPredicted RBP18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 EHBP1Q8NDI1 1231 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 HAS1Q92839 578 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 MTMR9Q96QG7 549 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 SPAG5Q96R06 1193 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 P2RX7Q99572 595 aaKnown RBP18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 RBM12Q9NTZ6 932 aaKnown RBP18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 BAIAP2L1Q9UHR4 511 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 KIAA1024Q9UPX6 916 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 GAKO14976 1311 aa18.92■□□□□ 0.62
LDLRAP1-201ENST00000374338 ADAMTSL1Q8N6G6 1762 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms