RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ZNF148Q9UQR1 794 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 CA4P22748 312 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 MAN1A1P33908 653 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 IRX4P78413 519 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 CYP4A11Q02928 519 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 ITIH3Q06033 890 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 NYXQ9GZU5 481 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 CAPN6Q9Y6Q1 641 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 UBE2Q2LH0YL09 131 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 DCUN1D2Q6PH85 259 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 FAM178BQ8IXR5 827 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 DDX27Q96GQ7 796 aaKnown RBP17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 MYOM1P52179 1685 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 NOL3O60936 208 aaKnown RBP17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 TRPM8Q7Z2W7 1104 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 KIRREL3Q8IZU9 778 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 ZC3H13Q5T200 1668 aaKnown RBP17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 NPHP4O75161 1426 aaPredicted RBP17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 SNAP23O00161 211 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 DCTN3O75935 186 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 HERVK_113P62684 666 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 TRIP13Q15645 432 aaPredicted RBP17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 SLC30A9Q6PML9 568 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 PROCA1Q8NCQ7 364 aaPredicted RBP17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 TCHPQ9BT92 498 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 TRIM9Q9C026 710 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 ARAP3Q8WWN8 1544 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 HEG1Q9ULI3 1381 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 UTYO14607 1347 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 SYF2O95926 243 aaKnown RBP17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 BRAFP15056 766 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 ZNF211Q13398 564 aaPredicted RBP17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 COL9A3Q14050 684 aaPredicted RBP17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 CCDC89Q8N998 374 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 ANAPC4Q9UJX5 808 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 INTUQ9ULD6 942 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 ERBB3P21860 1342 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 RHOBTB3O94955 611 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 NLRP10Q86W26 655 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 SRRM1Q8IYB3 904 aaKnown RBP17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 PHF20Q9BVI0 1012 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 SEC31BQ9NQW1 1179 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 INTS13Q9NVM9 706 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 DIS3Q9Y2L1 958 aaKnown RBP17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 A2ML1A8K2U0 1454 aa17.28■□□□□ 0.36
CLSTN1-201ENST00000361311 EXOC1LA0A1B0GW35 172 aa17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 NDC80O14777 642 aa17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 TTI1O43156 1089 aa17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 PLEKP08567 350 aaPredicted RBP17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 KCNH2Q12809 1159 aa17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 NUDCD1Q96RS6 583 aa17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 PRMT1Q99873 361 aaKnown RBP17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 MAK16Q9BXY0 300 aaKnown RBP17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 SH3GLB2Q9NR46 395 aa17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 TSPOAP1O95153 1857 aa17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 A0A0U1RQJ8 604 aa17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 PPP1R12AO14974 1030 aaPredicted RBP17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 RCN2Q14257 317 aa17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 HPS3Q969F9 1004 aa17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 LRRC37BQ96QE4 947 aa17.27■□□□□ 0.36
CLSTN1-201ENST00000361311 LMNAP02545 664 aaKnown RBP17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 ATF7P17544 494 aaPredicted RBP17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 PSMC2P35998 433 aaKnown RBP17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 SCTRP47872 440 aa17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 STK4Q13043 487 aa17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 SLC18A3Q16572 532 aa17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 MAP7D1Q3KQU3 841 aa17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 SWT1Q5T5J6 900 aaKnown RBP17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 ZNF653Q96CK0 615 aa17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 ISCUQ9H1K1 167 aa17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 SHPRHQ149N8 1683 aa17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 CCND1P24385 295 aa17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 HSD17B3P37058 310 aa17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 TOB1P50616 345 aaPredicted RBP17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 MYL7Q01449 175 aa17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 SLFN12Q8IYM2 578 aa17.27■□□□□ 0.35
CLSTN1-201ENST00000361311 PDHBP11177 359 aa17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 TGS1Q96RS0 853 aaKnown RBP17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 PLAGL2Q9UPG8 496 aa17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 HECW2Q9P2P5 1572 aa17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 TCP11X1B4DZS4 312 aa17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 CNPY4Q8N129 248 aa17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 LRRC47Q8N1G4 583 aaKnown RBP17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 PIGSQ96S52 555 aa17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 CCSER1Q9C0I3 900 aa17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 PPRC1Q5VV67 1664 aaKnown RBP17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 SYNGAP1Q96PV0 1343 aa17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 FAM187AA6NFU0 413 aa17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 PLA2G4BP0C869 781 aa17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 ESRRAP11474 423 aaPredicted RBP17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 PRLRP16471 622 aa17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 CASKIN2Q8WXE0 1202 aa17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 TUBB6Q9BUF5 446 aa17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 USP15Q9Y4E8 981 aaPredicted RBP17.26■□□□□ 0.35
CLSTN1-201ENST00000361311 WDR91A4D1P6 747 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 USH1GQ495M9 461 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 NAIF1Q69YI7 327 aaPredicted RBP17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 GIMAP8Q8ND71 665 aaPredicted RBP17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 IRAK4Q9NWZ3 460 aa17.25■□□□□ 0.35
CLSTN1-201ENST00000361311 DLC1Q96QB1 1528 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms