RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 EMSYQ7Z589 1322 aa20.11■□□□□ 0.81
PDLIM7-202ENST00000355841 A0A0U1RQG5 324 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-202ENST00000355841 HAS3O00219 553 aa20.11■□□□□ 0.81
PDLIM7-202ENST00000355841 MARCKSP29966 332 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-202ENST00000355841 PDXDC2PQ6P474 469 aa20.11■□□□□ 0.81
PDLIM7-202ENST00000355841 ERAP1Q9NZ08 941 aa20.11■□□□□ 0.81
PDLIM7-202ENST00000355841 VWA3AA6NCI4 1184 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 LAD1O00515 517 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 ATP4AP20648 1035 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 CDC25AP30304 524 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 NUCB2P80303 420 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 CYP4A11Q02928 519 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 GRIN1Q05586 938 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 TRIM60Q495X7 471 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 DTHD1Q6ZMT9 781 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 ZNF396Q96N95 335 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 KATNAL1Q9BW62 490 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 PCDH10Q9P2E7 1040 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 CEP131Q9UPN4 1083 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 ATP11BQ9Y2G3 1177 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 PP2D1A8MPX8 630 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 ARVCFO00192 962 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 ZNF862O60290 1169 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 PQBP1O60828 265 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 PRPHP41219 470 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 FXR2P51116 673 aaKnown RBP eCLIP20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 TMEM266Q2M3C6 531 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 FAM160B1Q5W0V3 765 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 PLPPR4Q7Z2D5 763 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 CKAP2LQ8IYA6 745 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 C7orf31Q8N865 590 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 RDM1Q8NG50 284 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 AFAP1L1Q8TED9 768 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 DYDC2Q96IM9 177 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 WRAP73Q9P2S5 460 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 HDAC6Q9UBN7 1215 aa20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 MAFBQ9Y5Q3 323 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-202ENST00000355841 SCN10AQ9Y5Y9 1956 aa20.09■□□□□ 0.81
PDLIM7-202ENST00000355841 SMIM10L2AP0DMW4 78 aa20.09■□□□□ 0.81
PDLIM7-202ENST00000355841 SMIM10L2BP0DMW5 78 aa20.09■□□□□ 0.81
PDLIM7-202ENST00000355841 RTP1P59025 263 aa20.09■□□□□ 0.81
PDLIM7-202ENST00000355841 CTTNQ14247 550 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-202ENST00000355841 HIC1Q14526 733 aa20.09■□□□□ 0.81
PDLIM7-202ENST00000355841 PLCB4Q15147 1175 aa20.09■□□□□ 0.81
PDLIM7-202ENST00000355841 EPHA7Q15375 998 aa20.09■□□□□ 0.81
PDLIM7-202ENST00000355841 SLC43A3Q8NBI5 491 aa20.09■□□□□ 0.81
PDLIM7-202ENST00000355841 EIF2AK1Q9BQI3 630 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-202ENST00000355841 IGSF9BQ9UPX0 1349 aa20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 BMP15O95972 392 aa20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 NCLP19338 710 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 NASPP49321 788 aaPredicted RBP20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 CDK7P50613 346 aa20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 ZNF200P98182 395 aaPredicted RBP20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 SNX17Q15036 470 aa20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 SLC39A14Q15043 492 aa20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 ARL6IP4Q66PJ3 421 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 LINC00301Q8NCQ3 95 aa20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 TRPV6Q9H1D0 765 aa20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 TRMT13Q9NUP7 481 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 SETD4Q9NVD3 440 aa20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 LRWD1Q9UFC0 647 aa20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 TRPC6Q9Y210 931 aa20.08■□□□□ 0.81
PDLIM7-202ENST00000355841 A0A087WWV3 80 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 TMEM150BA6NC51 233 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 SLITRK3O94933 977 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 PRKCEQ02156 737 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 TLE2Q04725 743 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 STK38Q15208 465 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 GDF6Q6KF10 455 aaPredicted RBP20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 NFRKBQ6P4R8 1299 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 TPH2Q8IWU9 490 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 IGSF22Q8N9C0 903 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 ZBTB10Q96DT7 871 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 CLIC6Q96NY7 704 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 LXNQ9BS40 222 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 POTEB3A0JP26 581 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 P4HBP07237 508 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 QARSP47897 775 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 IGBP1P78318 339 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 POTEBQ6S5H4 581 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 TRAPPC12Q8WVT3 735 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 HSD17B14Q9BPX1 270 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 SH2D3AQ9BRG2 576 aa20.07■□□□□ 0.8
PDLIM7-202ENST00000355841 MYH15Q9Y2K3 1946 aa20.06■□□□□ 0.8
PDLIM7-202ENST00000355841 ZBTB39O15060 712 aa20.06■□□□□ 0.8
PDLIM7-202ENST00000355841 B4GALT4O60513 344 aa20.06■□□□□ 0.8
PDLIM7-202ENST00000355841 MED24O75448 989 aa20.06■□□□□ 0.8
PDLIM7-202ENST00000355841 PSMC5P62195 406 aa20.06■□□□□ 0.8
PDLIM7-202ENST00000355841 PDIA5Q14554 519 aa20.06■□□□□ 0.8
PDLIM7-202ENST00000355841 SPECC1Q5M775 1068 aa20.06■□□□□ 0.8
PDLIM7-202ENST00000355841 ATP8B4Q8TF62 1192 aa20.06■□□□□ 0.8
PDLIM7-202ENST00000355841 ATP6V0A1Q93050 837 aa20.06■□□□□ 0.8
PDLIM7-202ENST00000355841 GTF2IRD1Q9UHL9 959 aa20.06■□□□□ 0.8
PDLIM7-202ENST00000355841 FBXO2Q9UK22 296 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-202ENST00000355841 CIZ1Q9ULV3 898 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-202ENST00000355841 SPTLC2O15270 562 aa20.05■□□□□ 0.8
PDLIM7-202ENST00000355841 SPATA31C1P0DKV0 1188 aa20.05■□□□□ 0.8
PDLIM7-202ENST00000355841 INSRRP14616 1297 aa20.05■□□□□ 0.8
PDLIM7-202ENST00000355841 SLC26A2P50443 739 aa20.05■□□□□ 0.8
PDLIM7-202ENST00000355841 PPFIA1Q13136 1202 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms