RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 SLC26A6Q9BXS9 759 aa20.24■□□□□ 0.83
CKLF-202ENST00000345436 IFIH1Q9BYX4 1025 aaKnown RBP20.24■□□□□ 0.83
CKLF-202ENST00000345436 TM6SF1Q9BZW5 370 aa20.24■□□□□ 0.83
CKLF-202ENST00000345436 CERS4Q9HA82 394 aa20.24■□□□□ 0.83
CKLF-202ENST00000345436 ZSWIM6Q9HCJ5 1215 aa20.24■□□□□ 0.83
CKLF-202ENST00000345436 TBC1D22BQ9NU19 505 aa20.24■□□□□ 0.83
CKLF-202ENST00000345436 TMEM260Q9NX78 707 aa20.24■□□□□ 0.83
CKLF-202ENST00000345436 LMCD1Q9NZU5 365 aa20.24■□□□□ 0.83
CKLF-202ENST00000345436 NID2Q14112 1375 aa20.23■□□□□ 0.83
CKLF-202ENST00000345436 BACH1O14867 736 aa20.23■□□□□ 0.83
CKLF-202ENST00000345436 ARP10275 920 aa20.23■□□□□ 0.83
CKLF-202ENST00000345436 EVCP57679 992 aa20.23■□□□□ 0.83
CKLF-202ENST00000345436 MRPS5P82675 430 aaKnown RBP20.23■□□□□ 0.83
CKLF-202ENST00000345436 MYO9BQ13459 2157 aa20.23■□□□□ 0.83
CKLF-202ENST00000345436 SKIV2LQ15477 1246 aaKnown RBP20.23■□□□□ 0.83
CKLF-202ENST00000345436 USP38Q8NB14 1042 aa20.23■□□□□ 0.83
CKLF-202ENST00000345436 CYP2W1Q8TAV3 490 aa20.23■□□□□ 0.83
CKLF-202ENST00000345436 C22orf23Q9BZE7 217 aa20.23■□□□□ 0.83
CKLF-202ENST00000345436 SH3GLB2Q9NR46 395 aa20.23■□□□□ 0.83
CKLF-202ENST00000345436 PPP4R2Q9NY27 417 aa20.23■□□□□ 0.83
CKLF-202ENST00000345436 CHD9Q3L8U1 2897 aa20.22■□□□□ 0.83
CKLF-202ENST00000345436 MBLAC1A4D2B0 266 aaPredicted RBP20.22■□□□□ 0.83
CKLF-202ENST00000345436 PDIA3P30101 505 aaKnown RBP20.22■□□□□ 0.83
CKLF-202ENST00000345436 IGBP1P78318 339 aa20.22■□□□□ 0.83
CKLF-202ENST00000345436 SSRP1Q08945 709 aaKnown RBP20.22■□□□□ 0.83
CKLF-202ENST00000345436 MIS18BP1Q6P0N0 1132 aa20.22■□□□□ 0.83
CKLF-202ENST00000345436 FAM117BQ6P1L5 589 aa20.22■□□□□ 0.83
CKLF-202ENST00000345436 FAM177A1Q8N128 213 aaPredicted RBP20.22■□□□□ 0.83
CKLF-202ENST00000345436 NME8Q8N427 588 aa20.22■□□□□ 0.83
CKLF-202ENST00000345436 SAMD11Q96NU1 681 aa20.22■□□□□ 0.83
CKLF-202ENST00000345436 POTEB3A0JP26 581 aa20.21■□□□□ 0.83
CKLF-202ENST00000345436 IPO5O00410 1097 aaKnown RBP20.21■□□□□ 0.83
CKLF-202ENST00000345436 INSRRP14616 1297 aa20.21■□□□□ 0.83
CKLF-202ENST00000345436 POTEBQ6S5H4 581 aa20.21■□□□□ 0.83
CKLF-202ENST00000345436 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.21■□□□□ 0.83
CKLF-202ENST00000345436 PHKBQ93100 1093 aa20.21■□□□□ 0.83
CKLF-202ENST00000345436 ZNF274Q96GC6 653 aaPredicted RBP20.21■□□□□ 0.83
CKLF-202ENST00000345436 YME1L1Q96TA2 773 aa20.21■□□□□ 0.83
CKLF-202ENST00000345436 ZNF577Q9BSK1 485 aa20.21■□□□□ 0.83
CKLF-202ENST00000345436 TELO2Q9Y4R8 837 aa20.21■□□□□ 0.83
CKLF-202ENST00000345436 MTCH2Q9Y6C9 303 aa20.21■□□□□ 0.83
CKLF-202ENST00000345436 TET1Q8NFU7 2136 aa20.2■□□□□ 0.82
CKLF-202ENST00000345436 HBP1O60381 514 aa20.2■□□□□ 0.82
CKLF-202ENST00000345436 ATG7O95352 703 aa20.2■□□□□ 0.82
CKLF-202ENST00000345436 NLRP5P59047 1200 aa20.2■□□□□ 0.82
CKLF-202ENST00000345436 ERVK-21P61565 698 aa20.2■□□□□ 0.82
CKLF-202ENST00000345436 CCT2P78371 535 aaKnown RBP20.2■□□□□ 0.82
CKLF-202ENST00000345436 PKN1Q16512 942 aa20.2■□□□□ 0.82
CKLF-202ENST00000345436 DNAJB3Q8WWF6 145 aa20.2■□□□□ 0.82
CKLF-202ENST00000345436 TOP1MTQ969P6 601 aa20.2■□□□□ 0.82
CKLF-202ENST00000345436 ASB2Q96Q27 587 aa20.2■□□□□ 0.82
CKLF-202ENST00000345436 PCDHA2Q9Y5H9 948 aa20.2■□□□□ 0.82
CKLF-202ENST00000345436 SQORQ9Y6N5 450 aa20.2■□□□□ 0.82
CKLF-202ENST00000345436 RFXAPO00287 272 aa20.19■□□□□ 0.82
CKLF-202ENST00000345436 CDKL5O76039 1030 aa20.19■□□□□ 0.82
CKLF-202ENST00000345436 CHRNA1P02708 482 aa20.19■□□□□ 0.82
CKLF-202ENST00000345436 USP11P51784 963 aa20.19■□□□□ 0.82
CKLF-202ENST00000345436 KRT76Q01546 638 aa20.19■□□□□ 0.82
CKLF-202ENST00000345436 ITGB3BPQ13352 177 aaPredicted RBP20.19■□□□□ 0.82
CKLF-202ENST00000345436 ZNF746Q6NUN9 644 aaPredicted RBP20.19■□□□□ 0.82
CKLF-202ENST00000345436 RUFY4Q6ZNE9 571 aa20.19■□□□□ 0.82
CKLF-202ENST00000345436 TMCO2Q7Z6W1 182 aaPredicted RBP20.19■□□□□ 0.82
CKLF-202ENST00000345436 SMAP1Q8IYB5 467 aaPredicted RBP20.19■□□□□ 0.82
CKLF-202ENST00000345436 PDRG1Q9NUG6 133 aa20.19■□□□□ 0.82
CKLF-202ENST00000345436 RNF216Q9NWF9 866 aaPredicted RBP20.19■□□□□ 0.82
CKLF-202ENST00000345436 COG5Q9UP83 839 aa20.19■□□□□ 0.82
CKLF-202ENST00000345436 LCHNA4D1U4 455 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 LINC01553A4QN01 128 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 FAM86B1E9PN63 330 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 DDX39AO00148 427 aaKnown RBP20.18■□□□□ 0.82
CKLF-202ENST00000345436 UPP2O95045 317 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 DEXIO95424 95 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 PSAPP07602 524 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 FAM86B2P0C5J1 330 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 GHRP10912 638 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 MRPS6P82932 125 aaKnown RBP20.18■□□□□ 0.82
CKLF-202ENST00000345436 HTRA4P83105 476 aaPredicted RBP20.18■□□□□ 0.82
CKLF-202ENST00000345436 GRB10Q13322 594 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 PLCB4Q15147 1175 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 NTRK3Q16288 839 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 TCTN1Q2MV58 587 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 ODR4Q5SWX8 454 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 MARCH8Q5T0T0 291 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 GALNT17Q6IS24 598 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 PDXDC2PQ6P474 469 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 ABHD15Q6UXT9 468 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 TSHZ1Q6ZSZ6 1077 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 CKAP2LQ8IYA6 745 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 PCYT2Q99447 389 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 FTHL17Q9BXU8 183 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 FAM49AQ9H0Q0 323 aaPredicted RBP20.18■□□□□ 0.82
CKLF-202ENST00000345436 ZNF302Q9NR11 478 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 CDY2AQ9Y6F7 541 aa20.18■□□□□ 0.82
CKLF-202ENST00000345436 UNC80Q8N2C7 3258 aa20.17■□□□□ 0.82
CKLF-202ENST00000345436 XBP1P17861 261 aa20.17■□□□□ 0.82
CKLF-202ENST00000345436 CIITAP33076 1130 aa20.17■□□□□ 0.82
CKLF-202ENST00000345436 PTPROQ16827 1216 aa20.17■□□□□ 0.82
CKLF-202ENST00000345436 PRR16Q569H4 304 aa20.17■□□□□ 0.82
CKLF-202ENST00000345436 ZNF484Q5JVG2 852 aa20.17■□□□□ 0.82
CKLF-202ENST00000345436 FBXO22Q8NEZ5 403 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms