RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ZHX3Q9H4I2 956 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 DNAJC25-GNG10A0A024R161 153 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 ASB14A6NK59 587 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 RHOBTB3O94955 611 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 EYA4O95677 639 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 KCNA2P16389 499 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 EDNRBP24530 442 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 MAPK4P31152 587 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 CCDC173Q0VFZ6 552 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 CT47A1Q5JQC4 288 aaPredicted RBP19.32■□□□□ 0.68
CLDN4-201ENST00000340958 ZNF746Q6NUN9 644 aaPredicted RBP19.32■□□□□ 0.68
CLDN4-201ENST00000340958 C17orf99Q6UX52 265 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 UNC13DQ70J99 1090 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 GPR142Q7Z601 462 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 ZSWIM4Q9H7M6 989 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 HTTP42858 3142 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 PVALEFA0A1B0GWK0 134 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 IKBKBO14920 756 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 KLRC4O43908 158 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 ERCC5P28715 1186 aaPredicted RBP19.31■□□□□ 0.68
CLDN4-201ENST00000340958 QARSP47897 775 aaKnown RBP19.31■□□□□ 0.68
CLDN4-201ENST00000340958 SLC12A3P55017 1021 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 CAP1Q01518 475 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 RAD51AP2Q09MP3 1159 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 PLEKHH3Q7Z736 793 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 CCDC65Q8IXS2 484 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 SMAP1Q8IYB5 467 aaPredicted RBP19.31■□□□□ 0.68
CLDN4-201ENST00000340958 SYT2Q8N9I0 419 aaPredicted RBP19.31■□□□□ 0.68
CLDN4-201ENST00000340958 SLC9A2Q9UBY0 812 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 MAPK8IP1Q9UQF2 711 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 GDAQ9Y2T3 454 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 PCDHA10Q9Y5I2 948 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 NFASCO94856 1347 aa19.31■□□□□ 0.68
CLDN4-201ENST00000340958 ICAM3P32942 547 aa19.3■□□□□ 0.68
CLDN4-201ENST00000340958 TPD52L1Q16890 204 aaPredicted RBP19.3■□□□□ 0.68
CLDN4-201ENST00000340958 ABRAQ8N0Z2 381 aa19.3■□□□□ 0.68
CLDN4-201ENST00000340958 CD99L2Q8TCZ2 262 aa19.3■□□□□ 0.68
CLDN4-201ENST00000340958 PANK4Q9NVE7 773 aa19.3■□□□□ 0.68
CLDN4-201ENST00000340958 CTNND2Q9UQB3 1225 aa19.3■□□□□ 0.68
CLDN4-201ENST00000340958 MGAMO43451 1857 aa19.3■□□□□ 0.68
CLDN4-201ENST00000340958 ADCY5O95622 1261 aa19.3■□□□□ 0.68
CLDN4-201ENST00000340958 CCNE2O96020 404 aa19.3■□□□□ 0.68
CLDN4-201ENST00000340958 PSAPP07602 524 aa19.3■□□□□ 0.68
CLDN4-201ENST00000340958 CYFIP1Q7L576 1253 aa19.3■□□□□ 0.68
CLDN4-201ENST00000340958 TRMT44Q8IYL2 757 aaKnown RBP19.3■□□□□ 0.68
CLDN4-201ENST00000340958 GIMAP8Q8ND71 665 aaPredicted RBP19.3■□□□□ 0.68
CLDN4-201ENST00000340958 RDM1Q8NG50 284 aa19.3■□□□□ 0.68
CLDN4-201ENST00000340958 TRIM5Q9C035 493 aa19.3■□□□□ 0.68
CLDN4-201ENST00000340958 NPHP3-ACAD11A0A0J9YXS1 232 aa19.29■□□□□ 0.68
CLDN4-201ENST00000340958 ARHGEF35A5YM69 484 aa19.29■□□□□ 0.68
CLDN4-201ENST00000340958 CYP11B2P19099 503 aa19.29■□□□□ 0.68
CLDN4-201ENST00000340958 STX17P56962 302 aa19.29■□□□□ 0.68
CLDN4-201ENST00000340958 PSMC5P62195 406 aa19.29■□□□□ 0.68
CLDN4-201ENST00000340958 CACNB1Q02641 598 aaPredicted RBP19.29■□□□□ 0.68
CLDN4-201ENST00000340958 NEDD9Q14511 834 aa19.29■□□□□ 0.68
CLDN4-201ENST00000340958 MIS18BP1Q6P0N0 1132 aa19.29■□□□□ 0.68
CLDN4-201ENST00000340958 KCNV1Q6PIU1 500 aa19.29■□□□□ 0.68
CLDN4-201ENST00000340958 TRMT1LQ7Z2T5 733 aaKnown RBP19.29■□□□□ 0.68
CLDN4-201ENST00000340958 TNS4Q8IZW8 715 aa19.29■□□□□ 0.68
CLDN4-201ENST00000340958 SENP7Q9BQF6 1050 aa19.29■□□□□ 0.68
CLDN4-201ENST00000340958 SLC5A4Q9NY91 659 aa19.29■□□□□ 0.68
CLDN4-201ENST00000340958 SYNRGQ9UMZ2 1314 aa19.29■□□□□ 0.68
CLDN4-201ENST00000340958 LOC102724159A0A0B4J2E5 919 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 PPP1R3GB7ZBB8 358 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 BACH1O14867 736 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 TBCAO75347 108 aaKnown RBP19.28■□□□□ 0.68
CLDN4-201ENST00000340958 TGFB3P10600 412 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 CD44P16070 742 aaKnown RBP19.28■□□□□ 0.68
CLDN4-201ENST00000340958 PRCPP42785 496 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 PAK1Q13153 545 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 PWP2Q15269 919 aaKnown RBP19.28■□□□□ 0.68
CLDN4-201ENST00000340958 CTU1Q7Z7A3 348 aaKnown RBP19.28■□□□□ 0.68
CLDN4-201ENST00000340958 ERO1AQ96HE7 468 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 SLC39A2Q9NP94 309 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 LCTP09848 1927 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 CENPFP49454 3210 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 PSMA7O14818 248 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 DKC1O60832 514 aaKnown RBP eCLIP19.28■□□□□ 0.68
CLDN4-201ENST00000340958 COBLO75128 1261 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 ACTR2P61160 394 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 SP2Q02086 613 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 HERC4Q5GLZ8 1057 aaPredicted RBP19.28■□□□□ 0.68
CLDN4-201ENST00000340958 FBXO16Q8IX29 292 aaPredicted RBP19.28■□□□□ 0.68
CLDN4-201ENST00000340958 ENOX1Q8TC92 643 aaKnown RBP19.28■□□□□ 0.68
CLDN4-201ENST00000340958 NELFBQ8WX92 580 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 ATP6V0A1Q93050 837 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 FGD4Q96M96 766 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 ARHGAP39Q9C0H5 1083 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 MLXIPQ9HAP2 919 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 WRAP73Q9P2S5 460 aaPredicted RBP19.28■□□□□ 0.68
CLDN4-201ENST00000340958 GABBR1Q9UBS5 961 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 NFE2L3Q9Y4A8 694 aa19.28■□□□□ 0.68
CLDN4-201ENST00000340958 ZBTB39O15060 712 aa19.27■□□□□ 0.68
CLDN4-201ENST00000340958 CDK11BP21127 795 aaKnown RBP19.27■□□□□ 0.68
CLDN4-201ENST00000340958 UBA1P22314 1058 aaKnown RBP19.27■□□□□ 0.68
CLDN4-201ENST00000340958 PPP1R2P41236 205 aa19.27■□□□□ 0.68
CLDN4-201ENST00000340958 LACTBP83111 547 aaPredicted RBP19.27■□□□□ 0.68
CLDN4-201ENST00000340958 COASYQ13057 564 aa19.27■□□□□ 0.68
CLDN4-201ENST00000340958 PSMD2Q13200 908 aa19.27■□□□□ 0.68
CLDN4-201ENST00000340958 ZNF792Q3KQV3 632 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 231.5 ms