RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 CNGA4Q8IV77 575 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 ZC3H15Q8WU90 426 aaKnown RBP13.79□□□□□ -0.2
ZNF548-201ENST00000336128 CCDC51Q96ER9 411 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 NOC4LQ9BVI4 516 aaKnown RBP13.79□□□□□ -0.2
ZNF548-201ENST00000336128 CCP110O43303 1012 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 GAP43P17677 238 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 CASP5P51878 434 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 TERF1P54274 439 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 GADL1Q6ZQY3 521 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 C1orf186Q6ZWK4 172 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 MOB2Q70IA6 237 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 OTUD5Q96G74 571 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 CLMNQ96JQ2 1002 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 KCTD10Q9H3F6 313 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 A1CFQ9NQ94 594 aaKnown RBP13.79□□□□□ -0.2
ZNF548-201ENST00000336128 TBC1D22BQ9NU19 505 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 CYP39A1Q9NYL5 469 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 COL4A3BPQ9Y5P4 624 aa13.79□□□□□ -0.2
ZNF548-201ENST00000336128 TESPA1A2RU30 521 aaPredicted RBP13.78□□□□□ -0.2
ZNF548-201ENST00000336128 NKRFO15226 690 aaKnown RBP eCLIP13.78□□□□□ -0.2
ZNF548-201ENST00000336128 P4HBP07237 508 aaKnown RBP13.78□□□□□ -0.2
ZNF548-201ENST00000336128 NR3C2P08235 984 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 PPATQ06203 517 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 TTLL12Q14166 644 aaPredicted RBP13.78□□□□□ -0.2
ZNF548-201ENST00000336128 PTPN14Q15678 1187 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 EPM2AIP1Q7L775 607 aaPredicted RBP13.78□□□□□ -0.2
ZNF548-201ENST00000336128 VSIG10LQ86VR7 867 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 ANKRD13AQ8IZ07 590 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 NSUN6Q8TEA1 469 aaKnown RBP13.78□□□□□ -0.2
ZNF548-201ENST00000336128 CEP63Q96MT8 703 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 A0A0G2JLL6 359 aaPredicted RBP13.78□□□□□ -0.2
ZNF548-201ENST00000336128 TRAF5O00463 557 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 FAM13AO94988 1023 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 MYBP10242 640 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 FKBP3Q00688 224 aaKnown RBP13.78□□□□□ -0.2
ZNF548-201ENST00000336128 TBC1D8BQ0IIM8 1120 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 MAN2A1Q16706 1144 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 VWA3BQ502W6 1294 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 PRRT2Q7Z6L0 340 aaPredicted RBP13.78□□□□□ -0.2
ZNF548-201ENST00000336128 ERO1BQ86YB8 467 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 PRIMPOLQ96LW4 560 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 NAA15Q9BXJ9 866 aaKnown RBP13.78□□□□□ -0.2
ZNF548-201ENST00000336128 MAF1Q9H063 256 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 POLD4Q9HCU8 107 aa13.78□□□□□ -0.2
ZNF548-201ENST00000336128 LOXHD1Q8IVV2 1947 aa13.77□□□□□ -0.2
ZNF548-201ENST00000336128 ARHGEF35A5YM69 484 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 GLTPD2A6NH11 291 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 SPDYE5A6NIY4 337 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 RNF225M0QZC1 329 aaPredicted RBP13.77□□□□□ -0.21
ZNF548-201ENST00000336128 IRF6O14896 467 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 ATP9AO75110 1047 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 FECHP22830 423 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 SYCP1Q15431 976 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 GPR162Q16538 588 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 FKBP15Q5T1M5 1219 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 LBX2Q6XYB7 198 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 NLRX1Q86UT6 975 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 ZC3H3Q8IXZ2 948 aaKnown RBP13.77□□□□□ -0.21
ZNF548-201ENST00000336128 PROCA1Q8NCQ7 364 aaPredicted RBP13.77□□□□□ -0.21
ZNF548-201ENST00000336128 CHST13Q8NET6 341 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 GPRASP2Q96D09 838 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 BCAS3Q9H6U6 928 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 ZSWIM4Q9H7M6 989 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 ZC3H4Q9UPT8 1303 aaKnown RBP13.77□□□□□ -0.21
ZNF548-201ENST00000336128 LCTP09848 1927 aa13.77□□□□□ -0.21
ZNF548-201ENST00000336128 BMT2Q1RMZ1 405 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 EAPPQ56P03 285 aaPredicted RBP13.76□□□□□ -0.21
ZNF548-201ENST00000336128 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 TOGARAM2Q6ZUX3 1019 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 MRPL44Q9H9J2 332 aaKnown RBP13.76□□□□□ -0.21
ZNF548-201ENST00000336128 ABHD10Q9NUJ1 306 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 KCND2Q9NZV8 630 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 BTBD7Q9P203 1132 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 PPP2R2CQ9Y2T4 447 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 SAMM50Q9Y512 469 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 SOWAHDA6NJG2 315 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 CXCL11O14625 94 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 ZSCAN12O43309 604 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 PEX10O60683 326 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 PRPF6O94906 941 aaKnown RBP13.76□□□□□ -0.21
ZNF548-201ENST00000336128 CCNE2O96020 404 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 HOXD13P35453 343 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 JAK3P52333 1124 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 KRT76Q01546 638 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 EDRF1Q3B7T1 1238 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 CCDC40Q4G0X9 1142 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 MYCT1Q8N699 235 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 INPP4AQ96PE3 977 aaPredicted RBP13.76□□□□□ -0.21
ZNF548-201ENST00000336128 ERGIC2Q96RQ1 377 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 NDST4Q9H3R1 872 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 TAF1DQ9H5J8 278 aaPredicted RBP13.76□□□□□ -0.21
ZNF548-201ENST00000336128 OLFML3Q9NRN5 406 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 TCEAL9Q9UHQ7 104 aa13.76□□□□□ -0.21
ZNF548-201ENST00000336128 SCN4AP35499 1836 aa13.75□□□□□ -0.21
ZNF548-201ENST00000336128 TTC26A0AVF1 554 aa13.75□□□□□ -0.21
ZNF548-201ENST00000336128 SFI1A8K8P3 1242 aa13.75□□□□□ -0.21
ZNF548-201ENST00000336128 WDR64B1ANS9 1081 aa13.75□□□□□ -0.21
ZNF548-201ENST00000336128 KIF2AO00139 706 aaPredicted RBP13.75□□□□□ -0.21
ZNF548-201ENST00000336128 LYPLA2O95372 231 aa13.75□□□□□ -0.21
ZNF548-201ENST00000336128 GCNT3O95395 438 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms