RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ADAM21Q9UKJ8 722 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 PCDHA6Q9UN73 950 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 PCDHA8Q9Y5H6 950 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 USP27XA6NNY8 438 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 SORBS3O60504 671 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 PODNQ7Z5L7 613 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 ZNF277Q9NRM2 450 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 INO80B-WBP1J3KQ70 363 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 XPOTO43592 962 aaKnown RBP18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 GH2P01242 217 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 YWHAGP61981 247 aaKnown RBP eCLIP18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 SLC7A5Q01650 507 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 IGDCC4Q8TDY8 1250 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 INO80BQ9C086 356 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 PPRC1Q5VV67 1664 aaKnown RBP18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 LRRC53A6NM62 1247 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 EVI5O60447 810 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 IRX4P78413 519 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 CTTNQ14247 550 aaKnown RBP18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 ANKRD36BP1Q96IX9 119 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 CCSER1Q9C0I3 900 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 CSF1RP07333 972 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 FAM83BQ5T0W9 1011 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 DNAJC24Q6P3W2 148 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 GADL1Q6ZQY3 521 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 SPC25Q9HBM1 224 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 NFU1Q9UMS0 254 aa18.48■□□□□ 0.55
TRAPPC11-201ENST00000334690 SGK1O00141 431 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 ARHGAP4P98171 946 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 CCDC93Q567U6 631 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 GPR101Q96P66 508 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 RASGRF2O14827 1237 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 FOXN1O15353 648 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 NR3C1P04150 777 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 CCND2P30279 289 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 KCNH2Q12809 1159 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 MASTLQ96GX5 879 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 RWDD2BP57060 319 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 RNASELQ05823 741 aaKnown RBP18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 SUPT20HL1Q3ZLR7 823 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 TBC1D9BQ66K14 1250 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 CYP4F22Q6NT55 531 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 SFR1Q86XK3 245 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 NACA2Q9H009 215 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 A6NJR5 290 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 PODXLO00592 558 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 COASYQ13057 564 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 TACO1Q9BSH4 297 aaKnown RBP18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 TUBE1Q9UJT0 475 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 DNAJC12Q9UKB3 198 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 MAD1L1Q9Y6D9 718 aa18.47■□□□□ 0.55
TRAPPC11-201ENST00000334690 ZNF233A6NK53 670 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 USP17L15C9J2P7 530 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 USP17L13C9JLJ4 530 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 USP17L11C9JVI0 530 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 USP17L18D6R9N7 530 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 USP17L22D6RA61 530 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 USP17L17D6RBQ6 530 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 USP17L19D6RCP7 530 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 USP17L20D6RJB6 530 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 PALMO75781 387 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 RAD17O75943 681 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 USP17L24Q0WX57 530 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 TTBK2Q6IQ55 1244 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 USP17L6PQ6QN14 398 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 SEL1LQ9UBV2 794 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 CEMIPQ8WUJ3 1361 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 FGGP02679 453 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 PSAPP07602 524 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 SURF1Q15526 300 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 TBC1D10BQ4KMP7 808 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 KRT27Q7Z3Y8 459 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 NOVA2Q9UNW9 492 aaKnown RBP18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 SART1O43290 800 aaKnown RBP18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 C12orf60Q5U649 245 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 CFAP57Q96MR6 1250 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 AP1M1Q9BXS5 423 aa18.46■□□□□ 0.55
TRAPPC11-201ENST00000334690 EIF2AK2P19525 551 aaKnown RBP18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 GUCY1A2P33402 732 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 CRKP46108 304 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 SNX1Q13596 522 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 RCSD1Q6JBY9 416 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 CALR3Q96L12 384 aaKnown RBP18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 NEXMIFQ5QGS0 1516 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 E9PMD0 336 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 TLR3O15455 904 aaKnown RBP18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 KNOP1Q1ED39 458 aaKnown RBP18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 NAALADL2Q58DX5 795 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 CAMSAP1Q5T5Y3 1602 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 MED7O43513 233 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 TFAMQ00059 246 aaKnown RBP18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 C6orf118Q5T5N4 469 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 SLFN12LQ6IEE8 588 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 XXYLT1Q8NBI6 393 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 PIGOQ8TEQ8 1089 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 DDX23Q9BUQ8 820 aaKnown RBP18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 NUF2Q9BZD4 464 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 SYNGAP1Q96PV0 1343 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 OVOS2A0A0G2JMS6 1433 aa18.45■□□□□ 0.54
TRAPPC11-201ENST00000334690 K7ERI5 159 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms