RNA–Protein interactions for RNA: ENST00000327347.9

SEPHS1-201, Transcript of selenophosphate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEPHS1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPHS1-201ENST00000327347 USP38Q8NB14 1042 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 RPGRQ92834 1020 aaKnown RBP18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 HDAC9Q9UKV0 1011 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 LEMD3Q9Y2U8 911 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 COL14A1Q05707 1796 aaKnown RBP18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 SFI1A8K8P3 1242 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 CLIC2O15247 247 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 MED24O75448 989 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 RPS6KA4O75676 772 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 FLT3P36888 993 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 SCNN1DP51172 638 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 PSMD2Q13200 908 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 PROM2Q8N271 834 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 CNBD1Q8NA66 436 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 CUL5Q93034 780 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 TSKSQ9UJT2 592 aa18.84■□□□□ 0.61
SEPHS1-201ENST00000327347 EPB41P11171 864 aaKnown RBP18.83■□□□□ 0.61
SEPHS1-201ENST00000327347 CDC37Q16543 378 aaPredicted RBP18.83■□□□□ 0.61
SEPHS1-201ENST00000327347 UBLCP1Q8WVY7 318 aaPredicted RBP18.83■□□□□ 0.61
SEPHS1-201ENST00000327347 SCLT1Q96NL6 688 aa18.83■□□□□ 0.61
SEPHS1-201ENST00000327347 NEUROG2Q9H2A3 272 aa18.83■□□□□ 0.61
SEPHS1-201ENST00000327347 AJAP1Q9UKB5 411 aaPredicted RBP18.83■□□□□ 0.61
SEPHS1-201ENST00000327347 ESYT2A0FGR8 921 aa18.83■□□□□ 0.6
SEPHS1-201ENST00000327347 EIF4E1BA6NMX2 242 aaKnown RBP18.83■□□□□ 0.6
SEPHS1-201ENST00000327347 RBAK-RBAKDNI3L0D1 243 aa18.83■□□□□ 0.6
SEPHS1-201ENST00000327347 CELF4Q9BZC1 486 aaKnown RBP18.83■□□□□ 0.6
SEPHS1-201ENST00000327347 DPH5Q9H2P9 285 aa18.83■□□□□ 0.6
SEPHS1-201ENST00000327347 DDX4Q9NQI0 724 aaKnown RBP18.83■□□□□ 0.6
SEPHS1-201ENST00000327347 RREB1Q92766 1687 aa18.83■□□□□ 0.6
SEPHS1-201ENST00000327347 CYP11B2P19099 503 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 COPB2P35606 906 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 GLE1Q53GS7 698 aaKnown RBP18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 LRRC4CQ9HCJ2 640 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 AMACRQ9UHK6 382 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 BCS1LQ9Y276 419 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 SPATA31A5Q5VU36 1347 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 SPATA31A7Q8IWB4 1347 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 RSPH10B2B2RC85 870 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 CETN3O15182 167 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 RSPH10BP0C881 870 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 TNNC1P63316 161 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 SKOR1P84550 965 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 KCNA1Q09470 495 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 SPRED3Q2MJR0 410 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 GANQ9H2C0 597 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 GGT7Q9UJ14 662 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 PCDHGC5Q9Y5F6 944 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 ABCB11O95342 1321 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 PNMA6FA0A0J9YX94 578 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 MYBP10242 640 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 CASP4P49662 377 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 PRPF4BQ13523 1007 aaKnown RBP18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 PRR16Q569H4 304 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 ARSHQ5FYA8 562 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 MCTP2Q6DN12 878 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 LRRC27Q9C0I9 530 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 KCTD10Q9H3F6 313 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 PCDHB13Q9Y5F0 798 aa18.82■□□□□ 0.6
SEPHS1-201ENST00000327347 SFR1Q86XK3 245 aa18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 ATP6V1G3Q96LB4 118 aa18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 DAGLAQ9Y4D2 1042 aa18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 GOLGA6L10A6NI86 522 aa18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 KIF4AO95239 1232 aa18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 UCHL3P15374 230 aa18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 HSD17B3P37058 310 aa18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 ZNF543Q08ER8 600 aa18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 ASPRV1Q53RT3 343 aa18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 ALKBH5Q6P6C2 394 aaKnown RBP18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 RBM46Q8TBY0 533 aaKnown RBP18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 ZNF473Q8WTR7 871 aaKnown RBP18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.81■□□□□ 0.68e-25■■■■■ 596.2
SEPHS1-201ENST00000327347 PCDHA2Q9Y5H9 948 aa18.81■□□□□ 0.6
SEPHS1-201ENST00000327347 DAPK3O43293 454 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 CTNNA1P35221 906 aaKnown RBP18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 MRPL12P52815 198 aaKnown RBP18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 CACNB3P54284 484 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 ARMCX3Q9UH62 379 aaPredicted RBP18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 GGA1Q9UJY5 639 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 THRAP3Q9Y2W1 955 aaKnown RBP18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 KRIT1O00522 736 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 SART1O43290 800 aaKnown RBP18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 PPP1R37O75864 691 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 RPSAP08865 295 aaKnown RBP18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 USH1GQ495M9 461 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 METTL13Q8N6R0 699 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 U2AF1L4Q8WU68 220 aaKnown RBP18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 CCT8L2Q96SF2 557 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 EDEM3Q9BZQ6 932 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 TAF1DQ9H5J8 278 aaPredicted RBP18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 DDX60LQ5H9U9 1706 aaKnown RBP18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 ABCB4P21439 1286 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 TNFRSF8P28908 595 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 SF3B2Q13435 895 aaKnown RBP18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 EXOC3L4Q17RC7 722 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 KDM7AQ6ZMT4 941 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 IRF2BP2Q7Z5L9 587 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 NAV1Q8NEY1 1877 aa18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 NUCKS1Q9H1E3 243 aaKnown RBP18.8■□□□□ 0.6
SEPHS1-201ENST00000327347 POLLQ9UGP5 575 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 449.5 ms