RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 SLC25A27O95847 323 aa18.3■□□□□ 0.52
LMNB2-201ENST00000325327 CCNE1P24864 410 aa18.3■□□□□ 0.52
LMNB2-201ENST00000325327 COPB2P35606 906 aa18.3■□□□□ 0.52
LMNB2-201ENST00000325327 TNNC1P63316 161 aa18.3■□□□□ 0.52
LMNB2-201ENST00000325327 VGLL4Q14135 290 aa18.3■□□□□ 0.52
LMNB2-201ENST00000325327 PLA2G4FQ68DD2 849 aa18.3■□□□□ 0.52
LMNB2-201ENST00000325327 CCDC114Q96M63 670 aa18.3■□□□□ 0.52
LMNB2-201ENST00000325327 NT5C1BQ96P26 610 aa18.3■□□□□ 0.52
LMNB2-201ENST00000325327 YDJCA8MPS7 323 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 SFNP31947 248 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 EXOC8Q8IYI6 725 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 RNF149Q8NC42 400 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 CCDC94Q9BW85 323 aaPredicted RBP18.29■□□□□ 0.52
LMNB2-201ENST00000325327 ALDH8A1Q9H2A2 487 aaPredicted RBP18.29■□□□□ 0.52
LMNB2-201ENST00000325327 PPP1R9AQ9ULJ8 1098 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 KCNH4Q9UQ05 1017 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 PDHXO00330 501 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 IRF6O14896 467 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 PRR29P0C7W0 189 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 LLGL1Q15334 1064 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 SEC23AQ15436 765 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 P2RX7Q99572 595 aaKnown RBP18.29■□□□□ 0.52
LMNB2-201ENST00000325327 EHD4Q9H223 541 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 MRC1P22897 1456 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 NPHP3-ACAD11A0A0J9YXS1 232 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 CAPN9O14815 690 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 EIF3JO75822 258 aaKnown RBP18.29■□□□□ 0.52
LMNB2-201ENST00000325327 GNAT1P11488 350 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 NPEPPSP55786 919 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 FAM149B1Q96BN6 582 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 MXI1P50539 228 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 HERVK_113P62684 666 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 ATP2C1P98194 919 aaPredicted RBP18.29■□□□□ 0.52
LMNB2-201ENST00000325327 DGKZQ13574 1117 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 TMTC1Q8IUR5 882 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 SEPT1Q8WYJ6 367 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 IFIH1Q9BYX4 1025 aaKnown RBP18.29■□□□□ 0.52
LMNB2-201ENST00000325327 KCNH7Q9NS40 1196 aa18.29■□□□□ 0.52
LMNB2-201ENST00000325327 ATF7P17544 494 aaPredicted RBP18.28■□□□□ 0.52
LMNB2-201ENST00000325327 CCDC97Q96F63 343 aaPredicted RBP18.28■□□□□ 0.52
LMNB2-201ENST00000325327 ANKRD36BP1Q96IX9 119 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 PCDHB4Q9Y5E5 795 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 ZNF568Q3ZCX4 644 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 DLK2Q6UY11 383 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 CCDC25Q86WR0 208 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 OTUD6BQ8N6M0 293 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 IPO4Q8TEX9 1081 aaKnown RBP18.28■□□□□ 0.52
LMNB2-201ENST00000325327 TMEM106CQ9BVX2 250 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 ZMYND12Q9H0C1 365 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 PLEKHA4Q9H4M7 779 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 FAM117BQ6P1L5 589 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 PHLDB2Q86SQ0 1253 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 RAD54LQ92698 747 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 MTRQ99707 1265 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 FAM213AQ9BRX8 229 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 RPF1Q9H9Y2 349 aaKnown RBP18.28■□□□□ 0.52
LMNB2-201ENST00000325327 ASTN2O75129 1339 aaPredicted RBP18.28■□□□□ 0.52
LMNB2-201ENST00000325327 ERCC5P28715 1186 aaPredicted RBP18.28■□□□□ 0.52
LMNB2-201ENST00000325327 USP50Q70EL3 339 aaPredicted RBP18.28■□□□□ 0.52
LMNB2-201ENST00000325327 SCFD2Q8WU76 684 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 SAAL1Q96ER3 474 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 CLMNQ96JQ2 1002 aa18.28■□□□□ 0.52
LMNB2-201ENST00000325327 POLR3FQ9H1D9 316 aaPredicted RBP18.28■□□□□ 0.52
LMNB2-201ENST00000325327 RIC1Q4ADV7 1423 aa18.27■□□□□ 0.52
LMNB2-201ENST00000325327 ICAM1P05362 532 aa18.27■□□□□ 0.52
LMNB2-201ENST00000325327 RHOXF2BP0C7M4 288 aa18.27■□□□□ 0.52
LMNB2-201ENST00000325327 RHOXF2Q9BQY4 288 aa18.27■□□□□ 0.52
LMNB2-201ENST00000325327 EFCC1Q9HA90 598 aa18.27■□□□□ 0.52
LMNB2-201ENST00000325327 ZNF541Q9H0D2 1346 aa18.27■□□□□ 0.52
LMNB2-201ENST00000325327 XPOTO43592 962 aaKnown RBP18.27■□□□□ 0.52
LMNB2-201ENST00000325327 CASP14P31944 242 aa18.27■□□□□ 0.52
LMNB2-201ENST00000325327 EPHA7Q15375 998 aa18.27■□□□□ 0.52
LMNB2-201ENST00000325327 SHROOM1Q2M3G4 852 aaPredicted RBP18.27■□□□□ 0.52
LMNB2-201ENST00000325327 YWHABP31946 246 aaKnown RBP18.27■□□□□ 0.51
LMNB2-201ENST00000325327 LRRC71Q8N4P6 559 aa18.27■□□□□ 0.51
LMNB2-201ENST00000325327 ZNF233A6NK53 670 aa18.26■□□□□ 0.51
LMNB2-201ENST00000325327 UNC13DQ70J99 1090 aa18.26■□□□□ 0.51
LMNB2-201ENST00000325327 TCP11Q8WWU5 503 aa18.26■□□□□ 0.51
LMNB2-201ENST00000325327 VPS33BQ9H267 617 aa18.26■□□□□ 0.51
LMNB2-201ENST00000325327 NRBP1Q9UHY1 535 aa18.26■□□□□ 0.51
LMNB2-201ENST00000325327 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.26■□□□□ 0.515e-6■■■■■ 30.5
LMNB2-201ENST00000325327 NMT1P30419 496 aaKnown RBP18.26■□□□□ 0.51
LMNB2-201ENST00000325327 GRIN1Q05586 938 aa18.26■□□□□ 0.51
LMNB2-201ENST00000325327 MAATS1Q7Z4T9 603 aa18.26■□□□□ 0.51
LMNB2-201ENST00000325327 FBXO16Q8IX29 292 aaPredicted RBP18.26■□□□□ 0.51
LMNB2-201ENST00000325327 DYDC1Q8WWB3 177 aa18.26■□□□□ 0.51
LMNB2-201ENST00000325327 IFT81Q8WYA0 676 aa18.26■□□□□ 0.51
LMNB2-201ENST00000325327 PPFIA1Q13136 1202 aa18.26■□□□□ 0.51
LMNB2-201ENST00000325327 CHST13Q8NET6 341 aa18.26■□□□□ 0.51
LMNB2-201ENST00000325327 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.26■□□□□ 0.51
LMNB2-201ENST00000325327 TRIM31Q9BZY9 425 aa18.26■□□□□ 0.51
LMNB2-201ENST00000325327 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.26■□□□□ 0.51
LMNB2-201ENST00000325327 AFPP02771 609 aaKnown RBP18.25■□□□□ 0.51
LMNB2-201ENST00000325327 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.51
LMNB2-201ENST00000325327 COASYQ13057 564 aa18.25■□□□□ 0.51
LMNB2-201ENST00000325327 MAP9Q49MG5 647 aa18.25■□□□□ 0.51
LMNB2-201ENST00000325327 PDCL2Q8N4E4 241 aa18.25■□□□□ 0.51
LMNB2-201ENST00000325327 WDR70Q9NW82 654 aa18.25■□□□□ 0.51
LMNB2-201ENST00000325327 GCNT4Q9P109 453 aa18.25■□□□□ 0.51
LMNB2-201ENST00000325327 ARHGAP6O43182 974 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms