RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 ASNA1O43681 348 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 PRPF6O94906 941 aaKnown RBP11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 S100A1P23297 94 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 MTHFSDQ2M296 383 aaKnown RBP11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 HSPA9P38646 679 aaKnown RBP11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 FLT4P35916 1363 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 TMEM154Q6P9G4 183 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 SRLQ86TD4 932 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 MFSD4BQ5TF39 518 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 TRIM67Q6ZTA4 783 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 KRT28Q7Z3Y7 464 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 ADA2Q9NZK5 511 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 TK2O00142 265 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 LRRC8EQ6NSJ5 796 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 MLKLQ8NB16 471 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 NT5C3AQ9H0P0 336 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 PZPP20742 1482 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 MECOMQ03112 1051 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 CYGBQ8WWM9 190 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 TBK1Q9UHD2 729 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 CUTAO60888 179 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 TCP1P17987 556 aaKnown RBP11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 RECQLP46063 649 aaPredicted RBP11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 ST5P78524 1137 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 NAA30Q147X3 362 aaPredicted RBP11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 MORF4L2Q15014 288 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 KLHL24Q6TFL4 600 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 DPH5Q9H2P9 285 aa11.98□□□□□ -0.49
HDGFL3-201ENST00000299633 CCDC151A5D8V7 595 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 TRIM49P0CI25 452 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 TRIM49CP0CI26 452 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 SPOPLQ6IQ16 392 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 PPARGC1AQ9UBK2 798 aaKnown RBP11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 TBKBP1A7MCY6 615 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 KCNA3P22001 575 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 IYDQ6PHW0 289 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 M0R3G1 203 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 PARP1P09874 1014 aaKnown RBP11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 SIX5Q8N196 739 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 PRPF18Q99633 342 aaKnown RBP11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 LSG1Q9H089 658 aaKnown RBP11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 SUN2Q9UH99 717 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 AURKCQ9UQB9 309 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 A0A0B4J269 797 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 ARIH2O95376 493 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 LDHCP07864 332 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 KLC1Q07866 573 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 TUBB3Q13509 450 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 ZNF804AQ7Z570 1209 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 A2MP01023 1474 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 C16orf96A6NNT2 1141 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 DISC1Q9NRI5 854 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 RSPH10B2B2RC85 870 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 RSPH10BP0C881 870 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 SOX6P35712 828 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 FRA10AC1Q70Z53 315 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 FAM210AQ96ND0 272 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 TCP11X2Q5H9J9 407 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 ANO1Q5XXA6 986 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 POTEEQ6S8J3 1075 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 MED10Q9BTT4 135 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 ATP2B4P23634 1241 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 SNRNP27Q8WVK2 155 aaKnown RBP11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 STX7O15400 261 aaKnown RBP11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 TPD52L2O43399 206 aaKnown RBP11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 LRRC39Q96DD0 335 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 MID2Q9UJV3 735 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 APOBEC2Q9Y235 224 aaKnown RBP11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 OTUD6AQ7L8S5 288 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 HEATR4Q86WZ0 1026 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 UBN1Q9NPG3 1134 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 KLC4Q9NSK0 619 aa11.97□□□□□ -0.49
HDGFL3-201ENST00000299633 IPPQ9Y573 584 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 ZNF518AQ6AHZ1 1483 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 CABIN1Q9Y6J0 2220 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 TPRP12270 2363 aaKnown RBP11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 HSPA6P17066 643 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 ATN1P54259 1190 aaPredicted RBP11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 ETF1P62495 437 aaKnown RBP11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 HADHQ16836 314 aaKnown RBP11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 ARMCX4Q5H9R4 360 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 MCRS1Q96EZ8 462 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 A0A0G2JND7 137 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 ZNF839A8K0R7 811 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 TAF4O00268 1085 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 CDC26Q8NHZ8 85 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 BRIP1Q9BX63 1249 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 CEBPAP49715 358 aaPredicted RBP11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 OTUD7BQ6GQQ9 843 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 IKBIPQ70UQ0 350 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 POLKQ9UBT6 870 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 ITGB3BPQ13352 177 aaPredicted RBP11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 FMO2Q99518 471 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 PARD6BQ9BYG5 372 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 ANP32DO95626 131 aa11.96□□□□□ -0.49
HDGFL3-201ENST00000299633 EIF2S1P05198 315 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms