RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 FGFR1OP2Q9NVK5 253 aa11.93□□□□□ -0.5
MSH6-201ENST00000234420 PYGLP06737 847 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 NLRP9Q7RTR0 991 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 TRIM42Q8IWZ5 723 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 ZBTB10Q96DT7 871 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 IGFLR1Q9H665 355 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 C19orf44Q9H6X5 657 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 NCOA5Q9HCD5 579 aaKnown RBP11.92□□□□□ -0.5
MSH6-201ENST00000234420 KCNJ14Q9UNX9 436 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 TTC21BQ7Z4L5 1316 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 ADCY3O60266 1144 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 GCP02774 474 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 HADHAP40939 763 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 RAB14P61106 215 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 DNAAF3Q8N9W5 541 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 PCIF1Q9H4Z3 704 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 FBXL21Q9UKT6 434 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 FBXO38Q6PIJ6 1188 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 CCDC84Q86UT8 332 aaPredicted RBP11.92□□□□□ -0.5
MSH6-201ENST00000234420 CDKL2Q92772 493 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 MAGOHBQ96A72 148 aaKnown RBP11.92□□□□□ -0.5
MSH6-201ENST00000234420 NDEL1Q9GZM8 345 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 EHD2Q9NZN4 543 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 RNF103-CHMP3A0A140T963 221 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 CCND2P30279 289 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 HSPH1Q92598 858 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 USP26Q9BXU7 913 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 CACNA1FO60840 1977 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 SLC16A2P36021 539 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 AP2B1P63010 937 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 CAPRIN1Q14444 709 aaKnown RBP11.92□□□□□ -0.5
MSH6-201ENST00000234420 BEND6Q5SZJ8 279 aaPredicted RBP11.92□□□□□ -0.5
MSH6-201ENST00000234420 MIS18BP1Q6P0N0 1132 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 CCDC51Q96ER9 411 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 PSTPIP2Q9H939 334 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 NEUROD4Q9HD90 331 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 NPATQ14207 1427 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 KIF28PB7ZC32 967 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 CD58P19256 250 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 PSMC5P62195 406 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 GPBP1Q86WP2 473 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 EEF2KMTQ96G04 330 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 POLE3Q9NRF9 147 aa11.92□□□□□ -0.5
MSH6-201ENST00000234420 IL16Q14005 1332 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 MAP4P27816 1152 aaKnown RBP11.91□□□□□ -0.5
MSH6-201ENST00000234420 TCEA2Q15560 299 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 TWF2Q6IBS0 349 aaKnown RBP11.91□□□□□ -0.5
MSH6-201ENST00000234420 FAM196AQ6ZSG2 479 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 STAT1P42224 750 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 OCRLQ01968 901 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 ANO5Q75V66 913 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 DDX25Q9UHL0 483 aaKnown RBP11.91□□□□□ -0.5
MSH6-201ENST00000234420 ARHGAP26Q9UNA1 814 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 CAB39Q9Y376 341 aaPredicted RBP11.91□□□□□ -0.5
MSH6-201ENST00000234420 SMCO2A6NFE2 343 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 CUTAO60888 179 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 SERPINB3P29508 390 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 ST13P50502 369 aaKnown RBP11.91□□□□□ -0.5
MSH6-201ENST00000234420 PRKCQQ04759 706 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 DHX9Q08211 1270 aaKnown RBP11.91□□□□□ -0.5
MSH6-201ENST00000234420 ODR4Q5SWX8 454 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 RINT1Q6NUQ1 792 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 ERFP50548 548 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 RASSF7Q02833 373 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 YWHAHQ04917 246 aaPredicted RBP11.91□□□□□ -0.5
MSH6-201ENST00000234420 PTK2BQ14289 1009 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 TDRD7Q8NHU6 1098 aaKnown RBP11.91□□□□□ -0.5
MSH6-201ENST00000234420 TRIM15Q9C019 465 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 KCNJ18B7U540 433 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 TPD52L2O43399 206 aaKnown RBP11.91□□□□□ -0.5
MSH6-201ENST00000234420 ORC4O43929 436 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 KCNJ12Q14500 433 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 C11orf74Q86VG3 221 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 NAF1Q96HR8 494 aaKnown RBP11.91□□□□□ -0.5
MSH6-201ENST00000234420 PITPNM3Q9BZ71 974 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 PPARGC1AQ9UBK2 798 aaKnown RBP11.91□□□□□ -0.5
MSH6-201ENST00000234420 STXBP3O00186 592 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 HSPA8P11142 646 aaKnown RBP11.91□□□□□ -0.5
MSH6-201ENST00000234420 NONOQ15233 471 aaKnown RBP eCLIP11.91□□□□□ -0.5
MSH6-201ENST00000234420 THEMIS2Q5TEJ8 643 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 KSR2Q6VAB6 950 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 PPM1KQ8N3J5 372 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 GPKOWQ92917 476 aaPredicted RBP eCLIP11.91□□□□□ -0.51e-10■■□□□ 11.7
MSH6-201ENST00000234420 OTUD5Q96G74 571 aa11.91□□□□□ -0.5
MSH6-201ENST00000234420 CDV3Q9UKY7 258 aaKnown RBP11.91□□□□□ -0.5
MSH6-201ENST00000234420 TSC22D2O75157 780 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 DCTN3O75935 186 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 SERPINB10P48595 397 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 KDELC2Q7Z4H8 507 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 TRIML1Q8N9V2 468 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 RFWD2Q8NHY2 731 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 ABCB6Q9NP58 842 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 PYGBP11216 843 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 ACTN1P12814 892 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 RAB44Q7Z6P3 723 aaPredicted RBP11.9□□□□□ -0.5
MSH6-201ENST00000234420 CASP10Q92851 521 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 CNKSR1Q969H4 720 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 ECT2Q9H8V3 914 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 GOLGA8IPA6NC78 632 aa11.9□□□□□ -0.5
MSH6-201ENST00000234420 KBTBD13C9JR72 458 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms