RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 PDHXO00330 501 aa20.16■□□□□ 0.82
VIM-201ENST00000224237 RGS20O76081 388 aa20.16■□□□□ 0.82
VIM-201ENST00000224237 ZBTB48P10074 688 aaPredicted RBP20.16■□□□□ 0.82
VIM-201ENST00000224237 HUNKP57058 714 aa20.16■□□□□ 0.82
VIM-201ENST00000224237 GSDMDP57764 484 aa20.16■□□□□ 0.82
VIM-201ENST00000224237 HERC4Q5GLZ8 1057 aaPredicted RBP20.16■□□□□ 0.82
VIM-201ENST00000224237 ZNF746Q6NUN9 644 aaPredicted RBP20.16■□□□□ 0.82
VIM-201ENST00000224237 TMC6Q7Z403 805 aa20.16■□□□□ 0.82
VIM-201ENST00000224237 REEP2Q9BRK0 252 aa20.16■□□□□ 0.82
VIM-201ENST00000224237 THAP9Q9H5L6 903 aa20.16■□□□□ 0.82
VIM-201ENST00000224237 EIF3JO75822 258 aaKnown RBP20.15■□□□□ 0.82
VIM-201ENST00000224237 CACNB1Q02641 598 aaPredicted RBP20.15■□□□□ 0.82
VIM-201ENST00000224237 RAD51AP2Q09MP3 1159 aa20.15■□□□□ 0.82
VIM-201ENST00000224237 CENPPQ6IPU0 288 aa20.15■□□□□ 0.82
VIM-201ENST00000224237 RINT1Q6NUQ1 792 aa20.15■□□□□ 0.82
VIM-201ENST00000224237 APTXQ7Z2E3 356 aaKnown RBP20.15■□□□□ 0.82
VIM-201ENST00000224237 MYOCDQ8IZQ8 938 aa20.15■□□□□ 0.82
VIM-201ENST00000224237 ZNF830Q96NB3 372 aaPredicted RBP20.15■□□□□ 0.82
VIM-201ENST00000224237 RUSC1Q9BVN2 902 aa20.15■□□□□ 0.82
VIM-201ENST00000224237 INTS13Q9NVM9 706 aa20.15■□□□□ 0.82
VIM-201ENST00000224237 NFASCO94856 1347 aa20.15■□□□□ 0.82
VIM-201ENST00000224237 KIF20AO95235 890 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 KCNA2P16389 499 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 QARSP47897 775 aaKnown RBP20.14■□□□□ 0.81
VIM-201ENST00000224237 ERVK-9P63128 1117 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 ERVK-24P63145 666 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 FSTL1Q12841 308 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 FILIP1LQ4L180 1135 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 TCP11X2Q5H9J9 407 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 FOXR2Q6PJQ5 311 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 VSTM4Q8IW00 320 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 CSGALNACT2Q8N6G5 542 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 FAM133AQ8N9E0 248 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 SMCR8Q8TEV9 937 aaPredicted RBP20.14■□□□□ 0.81
VIM-201ENST00000224237 SENP7Q9BQF6 1050 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 KCNF1Q9H3M0 494 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 MROH8Q9H579 483 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 LIMA1Q9UHB6 759 aaKnown RBP20.14■□□□□ 0.81
VIM-201ENST00000224237 PCDHA2Q9Y5H9 948 aa20.14■□□□□ 0.81
VIM-201ENST00000224237 B4DLN1 442 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 SPATA31C2B4DYI2 1134 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 KCNJ18B7U540 433 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 TBCAO75347 108 aaKnown RBP20.13■□□□□ 0.81
VIM-201ENST00000224237 LYPLA2O95372 231 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 EDNRBP24530 442 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 LRRC63Q05C16 580 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 KCNJ12Q14500 433 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 NR1I3Q14994 352 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 ANKRD40Q6AI12 368 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 SMAP1Q8IYB5 467 aaPredicted RBP20.13■□□□□ 0.81
VIM-201ENST00000224237 SHCBP1Q8NEM2 672 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 MPHOSPH6Q99547 160 aaKnown RBP20.13■□□□□ 0.81
VIM-201ENST00000224237 DUSP9Q99956 384 aaKnown RBP20.13■□□□□ 0.81
VIM-201ENST00000224237 SRRTQ9BXP5 876 aaKnown RBP20.13■□□□□ 0.81
VIM-201ENST00000224237 LRRC10BA6NIK2 292 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 EEF1GP26641 437 aaKnown RBP20.13■□□□□ 0.81
VIM-201ENST00000224237 ICAM3P32942 547 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 KCTD2Q14681 263 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 C1orf186Q6ZWK4 172 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 ANKRD23Q86SG2 305 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 SEMA6BQ9H3T3 888 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 ZHX3Q9H4I2 956 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 COL4A3BPQ9Y5P4 624 aa20.13■□□□□ 0.81
VIM-201ENST00000224237 CCNE2O96020 404 aa20.12■□□□□ 0.81
VIM-201ENST00000224237 KRT31Q15323 416 aa20.12■□□□□ 0.81
VIM-201ENST00000224237 FAM114A1Q8IWE2 563 aa20.12■□□□□ 0.81
VIM-201ENST00000224237 MMP19Q99542 508 aa20.12■□□□□ 0.81
VIM-201ENST00000224237 PTPN18Q99952 460 aa20.12■□□□□ 0.81
VIM-201ENST00000224237 JPH1Q9HDC5 661 aaPredicted RBP20.12■□□□□ 0.81
VIM-201ENST00000224237 MAGEC2Q9UBF1 373 aaPredicted RBP20.12■□□□□ 0.81
VIM-201ENST00000224237 DBR1Q9UK59 544 aaKnown RBP20.12■□□□□ 0.81
VIM-201ENST00000224237 ARHGEF35A5YM69 484 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 SOWAHBA6NEL2 793 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 ZBTB39O15060 712 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 GAP43P17677 238 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 PSMC5P62195 406 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 LRRC8AQ8IWT6 810 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 C4orf19Q8IY42 314 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 GLIS3Q8NEA6 775 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 TSG101Q99816 390 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 PORCNQ9H237 461 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 TBC1D7Q9P0N9 293 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 ODF2LQ9ULJ1 636 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 PCDHA10Q9Y5I2 948 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 CCNA1P78396 465 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 LRRC41Q15345 812 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 WDR78Q5VTH9 848 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 SFR1Q86XK3 245 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 IRF2BP1Q8IU81 584 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 CCDC150Q8NCX0 1101 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 SLC9A2Q9UBY0 812 aa20.11■□□□□ 0.81
VIM-201ENST00000224237 LRRC37A2A6NM11 1700 aa20.1■□□□□ 0.81
VIM-201ENST00000224237 FAM13AO94988 1023 aa20.1■□□□□ 0.81
VIM-201ENST00000224237 FGFR1OPO95684 399 aaKnown RBP20.1■□□□□ 0.81
VIM-201ENST00000224237 PGK2P07205 417 aa20.1■□□□□ 0.81
VIM-201ENST00000224237 GCLCP48506 637 aaPredicted RBP20.1■□□□□ 0.81
VIM-201ENST00000224237 COPB1P53618 953 aaKnown RBP20.1■□□□□ 0.81
VIM-201ENST00000224237 SPECC1LQ69YQ0 1117 aa20.1■□□□□ 0.81
VIM-201ENST00000224237 ANKRD13CQ8N6S4 541 aa20.1■□□□□ 0.81
VIM-201ENST00000224237 GPRC5AQ8NFJ5 357 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms