RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 WDR64B1ANS9 1081 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 PSMD10O75832 226 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 TDP2O95551 362 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 SELPP16109 830 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 STAT5BP51692 787 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 JAK3P52333 1124 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 EPHB4P54760 987 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 NR5A1Q13285 461 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 RASIP1Q5U651 963 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 TAF2Q6P1X5 1199 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 B3GNT9Q6UX72 402 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 LMBR1Q8WVP7 490 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 ATP6V0A1Q93050 837 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 FAM20AQ96MK3 541 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 FOXP1Q9H334 677 aaPredicted RBP19.7■□□□□ 0.74
MRPL28-201ENST00000199706 KCNMB3Q9NPA1 279 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 PCDHA10Q9Y5I2 948 aa19.7■□□□□ 0.74
MRPL28-201ENST00000199706 RRN3P2A6NIE6 340 aa19.69■□□□□ 0.74
MRPL28-201ENST00000199706 GAS7O60861 476 aa19.69■□□□□ 0.74
MRPL28-201ENST00000199706 CD2BP2O95400 341 aaKnown RBP19.69■□□□□ 0.74
MRPL28-201ENST00000199706 IQCF3P0C7M6 154 aa19.69■□□□□ 0.74
MRPL28-201ENST00000199706 PPFIA1Q13136 1202 aa19.69■□□□□ 0.74
MRPL28-201ENST00000199706 HIC1Q14526 733 aa19.69■□□□□ 0.74
MRPL28-201ENST00000199706 LETM2Q2VYF4 491 aa19.69■□□□□ 0.74
MRPL28-201ENST00000199706 LRCH2Q5VUJ6 765 aa19.69■□□□□ 0.74
MRPL28-201ENST00000199706 FAM184AQ8NB25 1140 aa19.69■□□□□ 0.74
MRPL28-201ENST00000199706 TEKT3Q9BXF9 490 aa19.69■□□□□ 0.74
MRPL28-201ENST00000199706 MAFBQ9Y5Q3 323 aaPredicted RBP19.69■□□□□ 0.74
MRPL28-201ENST00000199706 IGSF9BQ9UPX0 1349 aa19.69■□□□□ 0.74
MRPL28-201ENST00000199706 COL1A2P08123 1366 aa19.69■□□□□ 0.74
MRPL28-201ENST00000199706 SCN5AQ14524 2016 aa19.68■□□□□ 0.74
MRPL28-201ENST00000199706 BTBD18B2RXH4 712 aa19.68■□□□□ 0.74
MRPL28-201ENST00000199706 PSAPP07602 524 aa19.68■□□□□ 0.74
MRPL28-201ENST00000199706 CKBP12277 381 aa19.68■□□□□ 0.74
MRPL28-201ENST00000199706 ORC2Q13416 577 aaPredicted RBP19.68■□□□□ 0.74
MRPL28-201ENST00000199706 SHHQ15465 462 aa19.68■□□□□ 0.74
MRPL28-201ENST00000199706 C9orf50Q5SZB4 431 aa19.68■□□□□ 0.74
MRPL28-201ENST00000199706 LRRC8DQ7L1W4 858 aa19.68■□□□□ 0.74
MRPL28-201ENST00000199706 C16orf59Q7L2K0 433 aa19.68■□□□□ 0.74
MRPL28-201ENST00000199706 CCDC60Q8IWA6 550 aaPredicted RBP19.68■□□□□ 0.74
MRPL28-201ENST00000199706 ATP8B4Q8TF62 1192 aa19.68■□□□□ 0.74
MRPL28-201ENST00000199706 PPP1R13LQ8WUF5 828 aa19.68■□□□□ 0.74
MRPL28-201ENST00000199706 MTIF3Q9H2K0 278 aaKnown RBP19.68■□□□□ 0.74
MRPL28-201ENST00000199706 PCDH10Q9P2E7 1040 aa19.68■□□□□ 0.74
MRPL28-201ENST00000199706 CCL23P55773 120 aa19.67■□□□□ 0.74
MRPL28-201ENST00000199706 GRIK4Q16099 956 aa19.67■□□□□ 0.74
MRPL28-201ENST00000199706 EARS2Q5JPH6 523 aaKnown RBP19.67■□□□□ 0.74
MRPL28-201ENST00000199706 TMEM240Q5SV17 173 aa19.67■□□□□ 0.74
MRPL28-201ENST00000199706 HERVK_113Q902F9 699 aa19.67■□□□□ 0.74
MRPL28-201ENST00000199706 VWCEQ96DN2 955 aa19.67■□□□□ 0.74
MRPL28-201ENST00000199706 FAM167AQ96KS9 214 aa19.67■□□□□ 0.74
MRPL28-201ENST00000199706 RNPC3Q96LT9 517 aaKnown RBP19.67■□□□□ 0.74
MRPL28-201ENST00000199706 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.67■□□□□ 0.741e-8■■■■■ 29.6
MRPL28-201ENST00000199706 ZNF302Q9NR11 478 aa19.67■□□□□ 0.74
MRPL28-201ENST00000199706 SETD4Q9NVD3 440 aa19.67■□□□□ 0.74
MRPL28-201ENST00000199706 TUBE1Q9UJT0 475 aa19.67■□□□□ 0.74
MRPL28-201ENST00000199706 TET1Q8NFU7 2136 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 POTEB3A0JP26 581 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 DDX39AO00148 427 aaKnown RBP19.66■□□□□ 0.74
MRPL28-201ENST00000199706 BACH1O14867 736 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 TREHO43280 583 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 SLC37A4O43826 429 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 HBP1O60381 514 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 DTNBO60941 627 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 CXCL10P02778 98 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 TRAPPC10P48553 1259 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 PPP2R5CQ13362 524 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 PLCB4Q15147 1175 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 TRAF7Q6Q0C0 670 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 POTEBQ6S5H4 581 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 SLFN12Q8IYM2 578 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 DISC1Q9NRI5 854 aa19.66■□□□□ 0.74
MRPL28-201ENST00000199706 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.66■□□□□ 0.74
MRPL28-201ENST00000199706 SZT2Q5T011 3432 aa19.65■□□□□ 0.74
MRPL28-201ENST00000199706 CCNT1O60563 726 aaKnown RBP19.65■□□□□ 0.74
MRPL28-201ENST00000199706 INSRRP14616 1297 aa19.65■□□□□ 0.74
MRPL28-201ENST00000199706 MARK3P27448 753 aa19.65■□□□□ 0.74
MRPL28-201ENST00000199706 SMAD3P84022 425 aaKnown RBP19.65■□□□□ 0.74
MRPL28-201ENST00000199706 ZNF200P98182 395 aaPredicted RBP19.65■□□□□ 0.74
MRPL28-201ENST00000199706 MARCH8Q5T0T0 291 aa19.65■□□□□ 0.74
MRPL28-201ENST00000199706 PDXDC2PQ6P474 469 aa19.65■□□□□ 0.74
MRPL28-201ENST00000199706 BBXQ8WY36 941 aaPredicted RBP19.65■□□□□ 0.74
MRPL28-201ENST00000199706 WNT8BQ93098 351 aa19.65■□□□□ 0.74
MRPL28-201ENST00000199706 SCLYQ96I15 445 aa19.65■□□□□ 0.74
MRPL28-201ENST00000199706 VAV3Q9UKW4 847 aa19.65■□□□□ 0.74
MRPL28-201ENST00000199706 TRPC6Q9Y210 931 aa19.65■□□□□ 0.74
MRPL28-201ENST00000199706 FAM205CA6NFA0 338 aa19.64■□□□□ 0.73
MRPL28-201ENST00000199706 BAIAP3O94812 1187 aa19.64■□□□□ 0.73
MRPL28-201ENST00000199706 FGBP02675 491 aa19.64■□□□□ 0.73
MRPL28-201ENST00000199706 U2AF2P26368 475 aaKnown RBP eCLIP19.64■□□□□ 0.73
MRPL28-201ENST00000199706 CUL4AQ13619 759 aa19.64■□□□□ 0.73
MRPL28-201ENST00000199706 ZNF484Q5JVG2 852 aa19.64■□□□□ 0.73
MRPL28-201ENST00000199706 FAM26DQ5JW98 314 aa19.64■□□□□ 0.73
MRPL28-201ENST00000199706 SWSAP1Q6NVH7 229 aa19.64■□□□□ 0.73
MRPL28-201ENST00000199706 FAM43BQ6ZT52 329 aaPredicted RBP19.64■□□□□ 0.73
MRPL28-201ENST00000199706 ZNF365Q70YC5 407 aa19.64■□□□□ 0.73
MRPL28-201ENST00000199706 NOSTRINQ8IVI9 506 aa19.64■□□□□ 0.73
MRPL28-201ENST00000199706 HAS1Q92839 578 aa19.64■□□□□ 0.73
MRPL28-201ENST00000199706 UNC45AQ9H3U1 944 aa19.64■□□□□ 0.73
MRPL28-201ENST00000199706 CEP131Q9UPN4 1083 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms