RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 PCNX4Q63HM2 1172 aa16.81■□□□□ 0.28
SRRT-219ENST00000641476 TRAF7Q6Q0C0 670 aa16.81■□□□□ 0.28
SRRT-219ENST00000641476 METTL7BQ6UX53 244 aa16.81■□□□□ 0.28
SRRT-219ENST00000641476 EP400NLQ6ZTU2 488 aa16.81■□□□□ 0.28
SRRT-219ENST00000641476 SGMS1Q86VZ5 419 aa16.81■□□□□ 0.28
SRRT-219ENST00000641476 MICAL3Q7RTP6 2002 aa16.8■□□□□ 0.28
SRRT-219ENST00000641476 CNTNAP5Q8WYK1 1306 aa16.8■□□□□ 0.28
SRRT-219ENST00000641476 hCG_1642624A0A1W2PR95 340 aa16.8■□□□□ 0.28
SRRT-219ENST00000641476 SPATA31C2B4DYI2 1134 aa16.8■□□□□ 0.28
SRRT-219ENST00000641476 HOXC8P31273 242 aa16.8■□□□□ 0.28
SRRT-219ENST00000641476 IKBKEQ14164 716 aa16.8■□□□□ 0.28
SRRT-219ENST00000641476 NEDD9Q14511 834 aa16.8■□□□□ 0.28
SRRT-219ENST00000641476 ZNF618Q5T7W0 954 aa16.8■□□□□ 0.28
SRRT-219ENST00000641476 RNF20Q5VTR2 975 aa16.8■□□□□ 0.28
SRRT-219ENST00000641476 CYFIP1Q7L576 1253 aa16.8■□□□□ 0.28
SRRT-219ENST00000641476 TRIM50Q86XT4 487 aa16.8■□□□□ 0.28
SRRT-219ENST00000641476 NEK9Q8TD19 979 aa16.8■□□□□ 0.28
SRRT-219ENST00000641476 RTEL1Q9NZ71 1219 aa16.8■□□□□ 0.28
SRRT-219ENST00000641476 H3BRB1 525 aa16.79■□□□□ 0.28
SRRT-219ENST00000641476 EFCAB14O75071 495 aa16.79■□□□□ 0.28
SRRT-219ENST00000641476 SMIM10L2AP0DMW4 78 aa16.79■□□□□ 0.28
SRRT-219ENST00000641476 SMIM10L2BP0DMW5 78 aa16.79■□□□□ 0.28
SRRT-219ENST00000641476 MBTPS1Q14703 1052 aa16.79■□□□□ 0.28
SRRT-219ENST00000641476 UBE2SQ16763 222 aa16.79■□□□□ 0.28
SRRT-219ENST00000641476 XRRA1Q6P2D8 792 aa16.79■□□□□ 0.28
SRRT-219ENST00000641476 APOA5Q6Q788 366 aa16.79■□□□□ 0.28
SRRT-219ENST00000641476 SERINC5Q86VE9 423 aa16.79■□□□□ 0.28
SRRT-219ENST00000641476 MRPL38Q96DV4 380 aaKnown RBP16.79■□□□□ 0.28
SRRT-219ENST00000641476 GPR20Q99678 358 aa16.79■□□□□ 0.28
SRRT-219ENST00000641476 TUT1Q9H6E5 874 aaKnown RBP16.79■□□□□ 0.28
SRRT-219ENST00000641476 TELO2Q9Y4R8 837 aa16.79■□□□□ 0.28
SRRT-219ENST00000641476 SIP14410 1827 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 C17orf102A2RUQ5 167 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 CDC45O75419 566 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 SP4Q02446 784 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 ZP2Q05996 745 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 PTPROQ16827 1216 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 TIGD5Q53EQ6 642 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.78■□□□□ 0.28
SRRT-219ENST00000641476 HEATR3Q7Z4Q2 680 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 FANCBQ8NB91 859 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 TCEANC2Q96MN5 208 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 NEK1Q96PY6 1258 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 KCNH6Q9H252 994 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 PSTPIP2Q9H939 334 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 INSL6Q9Y581 213 aa16.78■□□□□ 0.28
SRRT-219ENST00000641476 POTEB3A0JP26 581 aa16.77■□□□□ 0.28
SRRT-219ENST00000641476 THPOP40225 353 aa16.77■□□□□ 0.28
SRRT-219ENST00000641476 POTEBQ6S5H4 581 aa16.77■□□□□ 0.28
SRRT-219ENST00000641476 HFE2Q6ZVN8 426 aa16.77■□□□□ 0.28
SRRT-219ENST00000641476 NLRX1Q86UT6 975 aa16.77■□□□□ 0.28
SRRT-219ENST00000641476 RASEFQ8IZ41 740 aa16.77■□□□□ 0.28
SRRT-219ENST00000641476 MYOCDQ8IZQ8 938 aa16.77■□□□□ 0.28
SRRT-219ENST00000641476 BANK1Q8NDB2 785 aa16.77■□□□□ 0.28
SRRT-219ENST00000641476 ATP6V0A1Q93050 837 aa16.77■□□□□ 0.28
SRRT-219ENST00000641476 GPRASP2Q96D09 838 aa16.77■□□□□ 0.28
SRRT-219ENST00000641476 SENP7Q9BQF6 1050 aa16.77■□□□□ 0.28
SRRT-219ENST00000641476 USP26Q9BXU7 913 aa16.77■□□□□ 0.28
SRRT-219ENST00000641476 ZNF215Q9UL58 517 aaPredicted RBP16.77■□□□□ 0.28
SRRT-219ENST00000641476 WDFY4Q6ZS81 3184 aa16.77■□□□□ 0.28
SRRT-219ENST00000641476 EMSYQ7Z589 1322 aa16.76■□□□□ 0.27
SRRT-219ENST00000641476 TREHO43280 583 aa16.76■□□□□ 0.27
SRRT-219ENST00000641476 AMHP03971 560 aa16.76■□□□□ 0.27
SRRT-219ENST00000641476 KCNA2P16389 499 aa16.76■□□□□ 0.27
SRRT-219ENST00000641476 ADCK5Q3MIX3 580 aa16.76■□□□□ 0.27
SRRT-219ENST00000641476 EPC2Q52LR7 807 aa16.76■□□□□ 0.27
SRRT-219ENST00000641476 TCEAL5Q5H9L2 206 aa16.76■□□□□ 0.27
SRRT-219ENST00000641476 UTP14CQ5TAP6 766 aaKnown RBP16.76■□□□□ 0.27
SRRT-219ENST00000641476 WWC2Q6AWC2 1192 aa16.76■□□□□ 0.27
SRRT-219ENST00000641476 SYNE3Q6ZMZ3 975 aa16.76■□□□□ 0.27
SRRT-219ENST00000641476 RBM28Q9NW13 759 aaKnown RBP16.76■□□□□ 0.27
SRRT-219ENST00000641476 FAM50BQ9Y247 325 aa16.76■□□□□ 0.27
SRRT-219ENST00000641476 SPDYE3A6NKU9 549 aa16.75■□□□□ 0.27
SRRT-219ENST00000641476 LGR5O75473 907 aa16.75■□□□□ 0.27
SRRT-219ENST00000641476 ITGB5P18084 799 aa16.75■□□□□ 0.27
SRRT-219ENST00000641476 EXOSC10Q01780 885 aaKnown RBP16.75■□□□□ 0.27
SRRT-219ENST00000641476 RTN1Q16799 776 aa16.75■□□□□ 0.27
SRRT-219ENST00000641476 PABPC5Q96DU9 382 aaKnown RBP16.75■□□□□ 0.27
SRRT-219ENST00000641476 CDHR1Q96JP9 859 aa16.75■□□□□ 0.27
SRRT-219ENST00000641476 RNPEPQ9H4A4 650 aa16.75■□□□□ 0.27
SRRT-219ENST00000641476 CLDND1Q9NY35 253 aa16.75■□□□□ 0.27
SRRT-219ENST00000641476 PRKAG3Q9UGI9 489 aa16.75■□□□□ 0.27
SRRT-219ENST00000641476 BRPF3Q9ULD4 1205 aa16.75■□□□□ 0.27
SRRT-219ENST00000641476 GOLGA8AA7E2F4 631 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 GOLGA8BA8MQT2 603 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 RSPH10B2B2RC85 870 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 ZBTB43O43298 467 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 ATP9AO75110 1047 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 CAND2O75155 1236 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 CTSHP09668 335 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 RSPH10BP0C881 870 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 HTRA4P83105 476 aaPredicted RBP16.74■□□□□ 0.27
SRRT-219ENST00000641476 FUT2Q10981 343 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 MKRN4PQ13434 485 aaPredicted RBP16.74■□□□□ 0.27
SRRT-219ENST00000641476 GPM6BQ13491 265 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 MTMR1Q13613 665 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 KRT32Q14532 448 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 TSGA10IPQ3SY00 556 aa16.74■□□□□ 0.27
SRRT-219ENST00000641476 TYW1BQ6NUM6 668 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms