RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 LCHNA4D1U4 455 aa18.78■□□□□ 0.6
COLCA2-206ENST00000638573 CPLX1O14810 134 aa18.78■□□□□ 0.6
COLCA2-206ENST00000638573 STAM2O75886 525 aa18.78■□□□□ 0.6
COLCA2-206ENST00000638573 HOXC8P31273 242 aa18.78■□□□□ 0.6
COLCA2-206ENST00000638573 RFC2P35250 354 aa18.78■□□□□ 0.6
COLCA2-206ENST00000638573 THPOP40225 353 aa18.78■□□□□ 0.6
COLCA2-206ENST00000638573 WDR5P61964 334 aaKnown RBP18.78■□□□□ 0.6
COLCA2-206ENST00000638573 CCT2P78371 535 aaKnown RBP18.78■□□□□ 0.6
COLCA2-206ENST00000638573 CCDC85BQ15834 202 aaPredicted RBP18.78■□□□□ 0.6
COLCA2-206ENST00000638573 PPP2R2DQ66LE6 453 aa18.78■□□□□ 0.6
COLCA2-206ENST00000638573 CPLX2Q6PUV4 134 aaKnown RBP18.78■□□□□ 0.6
COLCA2-206ENST00000638573 SERINC5Q86VE9 423 aa18.78■□□□□ 0.6
COLCA2-206ENST00000638573 ATP6V0A1Q93050 837 aa18.78■□□□□ 0.6
COLCA2-206ENST00000638573 PHKBQ93100 1093 aa18.78■□□□□ 0.6
COLCA2-206ENST00000638573 SLC28A3Q9HAS3 691 aa18.78■□□□□ 0.6
COLCA2-206ENST00000638573 NCOA5Q9HCD5 579 aaKnown RBP18.78■□□□□ 0.6
COLCA2-206ENST00000638573 RIC8AQ9NPQ8 531 aa18.78■□□□□ 0.6
COLCA2-206ENST00000638573 SPDYE3A6NKU9 549 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 ARP10275 920 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 IGFBP4P22692 258 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 TCF7P36402 384 aaPredicted RBP18.77■□□□□ 0.6
COLCA2-206ENST00000638573 AKAP17AQ02040 695 aaKnown RBP18.77■□□□□ 0.6
COLCA2-206ENST00000638573 STK3Q13188 491 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 MTMR1Q13613 665 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 RABEP1Q15276 862 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 KRT40Q6A162 431 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 RUFY4Q6ZNE9 571 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 NLRX1Q86UT6 975 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 HERC6Q8IVU3 1022 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 CCDC155Q8N6L0 562 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 GPRASP2Q96D09 838 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 PCYT2Q99447 389 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 ANO3Q9BYT9 981 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 SLKQ9H2G2 1235 aaPredicted RBP18.77■□□□□ 0.6
COLCA2-206ENST00000638573 PCDHA11Q9Y5I1 949 aa18.77■□□□□ 0.6
COLCA2-206ENST00000638573 TRIP12Q14669 1992 aaPredicted RBP18.77■□□□□ 0.59
COLCA2-206ENST00000638573 SMCO2A6NFE2 343 aa18.76■□□□□ 0.59
COLCA2-206ENST00000638573 CXCL10P02778 98 aa18.76■□□□□ 0.59
COLCA2-206ENST00000638573 ACTN1P12814 892 aa18.76■□□□□ 0.59
COLCA2-206ENST00000638573 ADCY7P51828 1080 aa18.76■□□□□ 0.59
COLCA2-206ENST00000638573 PKN1Q16512 942 aa18.76■□□□□ 0.59
COLCA2-206ENST00000638573 JAKMIP3Q5VZ66 844 aa18.76■□□□□ 0.59
COLCA2-206ENST00000638573 FAM117BQ6P1L5 589 aa18.76■□□□□ 0.59
COLCA2-206ENST00000638573 XRRA1Q6P2D8 792 aa18.76■□□□□ 0.59
COLCA2-206ENST00000638573 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.76■□□□□ 0.59
COLCA2-206ENST00000638573 LMBR1Q8WVP7 490 aa18.76■□□□□ 0.59
COLCA2-206ENST00000638573 TBC1D32Q96NH3 1257 aa18.76■□□□□ 0.59
COLCA2-206ENST00000638573 SENP7Q9BQF6 1050 aa18.76■□□□□ 0.59
COLCA2-206ENST00000638573 COL25A1Q9BXS0 654 aaPredicted RBP18.76■□□□□ 0.59
COLCA2-206ENST00000638573 JADE2Q9NQC1 790 aa18.76■□□□□ 0.59
COLCA2-206ENST00000638573 BARHL2Q9NY43 387 aa18.76■□□□□ 0.59
COLCA2-206ENST00000638573 hCG_1984214I3L0E3 225 aa18.75■□□□□ 0.59
COLCA2-206ENST00000638573 ARHGAP4P98171 946 aa18.75■□□□□ 0.59
COLCA2-206ENST00000638573 ITGB3BPQ13352 177 aaPredicted RBP18.75■□□□□ 0.59
COLCA2-206ENST00000638573 TRIM22Q8IYM9 498 aa18.75■□□□□ 0.59
COLCA2-206ENST00000638573 ZNF713Q8N859 430 aaPredicted RBP18.75■□□□□ 0.59
COLCA2-206ENST00000638573 IL27Q8NEV9 243 aa18.75■□□□□ 0.59
COLCA2-206ENST00000638573 RASGRP4Q8TDF6 673 aa18.75■□□□□ 0.59
COLCA2-206ENST00000638573 PRUNE2Q8WUY3 3088 aa18.75■□□□□ 0.59
COLCA2-206ENST00000638573 UNC80Q8N2C7 3258 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 CHD7Q9P2D1 2997 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 ST18O60284 1047 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 CDKL5O76039 1030 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 CLK2P49760 499 aaKnown RBP18.74■□□□□ 0.59
COLCA2-206ENST00000638573 ADAM17P78536 824 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 TAP1Q03518 808 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 PFKFB3Q16875 520 aaPredicted RBP18.74■□□□□ 0.59
COLCA2-206ENST00000638573 CNKSR3Q6P9H4 555 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 MICALL1Q8N3F8 863 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 DBF4BQ8NFT6 615 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 SLC9A7Q96T83 725 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 GAS2L1Q99501 681 aaPredicted RBP18.74■□□□□ 0.59
COLCA2-206ENST00000638573 KIF2CQ99661 725 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 MXRA8Q9BRK3 442 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 KCNH7Q9NS40 1196 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 TPCN1Q9ULQ1 816 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 PTPRSQ13332 1948 aa18.74■□□□□ 0.59
COLCA2-206ENST00000638573 A0A0C4DFX4 3053 aa18.73■□□□□ 0.59
COLCA2-206ENST00000638573 RSPH10B2B2RC85 870 aa18.73■□□□□ 0.59
COLCA2-206ENST00000638573 DDX39AO00148 427 aaKnown RBP18.73■□□□□ 0.59
COLCA2-206ENST00000638573 PFKFB2O60825 505 aa18.73■□□□□ 0.59
COLCA2-206ENST00000638573 RSPH10BP0C881 870 aa18.73■□□□□ 0.59
COLCA2-206ENST00000638573 SCG2P13521 617 aa18.73■□□□□ 0.59
COLCA2-206ENST00000638573 IFNAR1P17181 557 aa18.73■□□□□ 0.59
COLCA2-206ENST00000638573 NTRK3Q16288 839 aa18.73■□□□□ 0.59
COLCA2-206ENST00000638573 SLC26A6Q9BXS9 759 aa18.73■□□□□ 0.59
COLCA2-206ENST00000638573 RNF26Q9BY78 433 aaPredicted RBP18.73■□□□□ 0.59
COLCA2-206ENST00000638573 FAM86B1E9PN63 330 aa18.72■□□□□ 0.59
COLCA2-206ENST00000638573 PRPF3O43395 683 aaKnown RBP18.72■□□□□ 0.59
COLCA2-206ENST00000638573 LGR5O75473 907 aa18.72■□□□□ 0.59
COLCA2-206ENST00000638573 BAIAP3O94812 1187 aa18.72■□□□□ 0.59
COLCA2-206ENST00000638573 FAM86B2P0C5J1 330 aa18.72■□□□□ 0.59
COLCA2-206ENST00000638573 KCNJ6P48051 423 aa18.72■□□□□ 0.59
COLCA2-206ENST00000638573 IGBP1P78318 339 aa18.72■□□□□ 0.59
COLCA2-206ENST00000638573 SSRP1Q08945 709 aaKnown RBP18.72■□□□□ 0.59
COLCA2-206ENST00000638573 SCRN1Q12765 414 aa18.72■□□□□ 0.59
COLCA2-206ENST00000638573 MKRN4PQ13434 485 aaPredicted RBP18.72■□□□□ 0.59
COLCA2-206ENST00000638573 PPP1R18Q6NYC8 613 aa18.72■□□□□ 0.59
COLCA2-206ENST00000638573 TRAPPC12Q8WVT3 735 aa18.72■□□□□ 0.59
COLCA2-206ENST00000638573 ARNTL2Q8WYA1 636 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms