RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 MNS1Q8NEH6 495 aa21.83■■□□□ 1.09
PCDHB11-202ENST00000624887 REEP2Q9BRK0 252 aa21.83■■□□□ 1.09
PCDHB11-202ENST00000624887 TUFT1Q9NNX1 390 aa21.83■■□□□ 1.09
PCDHB11-202ENST00000624887 MYO1AQ9UBC5 1043 aa21.83■■□□□ 1.09
PCDHB11-202ENST00000624887 REXO2Q9Y3B8 237 aaKnown RBP21.83■■□□□ 1.09
PCDHB11-202ENST00000624887 ZNF536O15090 1300 aa21.83■■□□□ 1.09
PCDHB11-202ENST00000624887 FZD9O00144 591 aa21.83■■□□□ 1.08
PCDHB11-202ENST00000624887 GNA14O95837 355 aa21.83■■□□□ 1.08
PCDHB11-202ENST00000624887 CDK17Q00537 523 aa21.83■■□□□ 1.08
PCDHB11-202ENST00000624887 ERCC6LQ2NKX8 1250 aa21.83■■□□□ 1.08
PCDHB11-202ENST00000624887 PPP4R3CPQ6ZMV5 832 aa21.83■■□□□ 1.08
PCDHB11-202ENST00000624887 NELFCDQ8IXH7 590 aa21.83■■□□□ 1.08
PCDHB11-202ENST00000624887 ZC3H3Q8IXZ2 948 aaKnown RBP21.83■■□□□ 1.08
PCDHB11-202ENST00000624887 PRPF38AQ8NAV1 312 aaKnown RBP21.83■■□□□ 1.08
PCDHB11-202ENST00000624887 CARD6Q9BX69 1037 aa21.83■■□□□ 1.08
PCDHB11-202ENST00000624887 KIAA1683Q9H0B3 1180 aa21.83■■□□□ 1.08
PCDHB11-202ENST00000624887 ZHX3Q9H4I2 956 aa21.83■■□□□ 1.08
PCDHB11-202ENST00000624887 RGL1Q9NZL6 768 aa21.83■■□□□ 1.08
PCDHB11-202ENST00000624887 HSD17B4P51659 736 aa21.82■■□□□ 1.08
PCDHB11-202ENST00000624887 ZNF569Q5MCW4 686 aa21.82■■□□□ 1.08
PCDHB11-202ENST00000624887 CCDC170Q8IYT3 715 aa21.82■■□□□ 1.08
PCDHB11-202ENST00000624887 AGBL1Q96MI9 1066 aa21.82■■□□□ 1.08
PCDHB11-202ENST00000624887 BHMT2Q9H2M3 363 aa21.82■■□□□ 1.08
PCDHB11-202ENST00000624887 CCPG1Q9ULG6 757 aa21.82■■□□□ 1.08
PCDHB11-202ENST00000624887 RABGAP1Q9Y3P9 1069 aa21.82■■□□□ 1.08
PCDHB11-202ENST00000624887 CTNND1O60716 968 aaKnown RBP21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 TADA3O75528 432 aa21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 HNRNPH3P31942 346 aaKnown RBP21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 MARSP56192 900 aaKnown RBP21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 UBXN2AP68543 259 aa21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 SETQ01105 290 aaPredicted RBP21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 EDRF1Q3B7T1 1238 aa21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 CCDC94Q9BW85 323 aaPredicted RBP21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 RBBP6Q7Z6E9 1792 aaKnown RBP21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 EFCAB8A8MWE9 144 aa21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 ABL1P00519 1130 aa21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 CYLC1P35663 651 aaPredicted RBP21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 CCDC40Q4G0X9 1142 aa21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 FHDC1Q9C0D6 1143 aaPredicted RBP21.81■■□□□ 1.08
PCDHB11-202ENST00000624887 GAS7O60861 476 aa21.8■■□□□ 1.08
PCDHB11-202ENST00000624887 SLITRK3O94933 977 aa21.8■■□□□ 1.08
PCDHB11-202ENST00000624887 MUTP22033 750 aa21.8■■□□□ 1.08
PCDHB11-202ENST00000624887 GMPSP49915 693 aaPredicted RBP21.8■■□□□ 1.08
PCDHB11-202ENST00000624887 KRT83P78385 493 aa21.8■■□□□ 1.08
PCDHB11-202ENST00000624887 ZNF662Q6ZS27 426 aa21.8■■□□□ 1.08
PCDHB11-202ENST00000624887 EPM2AIP1Q7L775 607 aaPredicted RBP21.8■■□□□ 1.08
PCDHB11-202ENST00000624887 SFR1Q86XK3 245 aa21.8■■□□□ 1.08
PCDHB11-202ENST00000624887 MICALL2Q8IY33 904 aa21.8■■□□□ 1.08
PCDHB11-202ENST00000624887 NHEJ1Q9H9Q4 299 aaPredicted RBP21.8■■□□□ 1.08
PCDHB11-202ENST00000624887 PLAGL2Q9UPG8 496 aa21.8■■□□□ 1.08
PCDHB11-202ENST00000624887 CASP5P51878 434 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 UBXN4Q92575 508 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 ZNF577Q9BSK1 485 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 RUSC1Q9BVN2 902 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 WDR11Q9BZH6 1224 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 HAUS4Q9H6D7 363 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 MMRN2Q9H8L6 949 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 FAM207AQ9NSI2 230 aaPredicted RBP21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 EPHB6O15197 1021 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 HERVK_113P62684 666 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 GHRHRQ02643 423 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 PPP2R3AQ06190 1150 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 CTTNQ14247 550 aaKnown RBP21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 SAMD7Q7Z3H4 446 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 TRIM59Q8IWR1 403 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 SLC35F6Q8N357 371 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 HOOK2Q96ED9 719 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 DYDC2Q96IM9 177 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 EDEM3Q9BZQ6 932 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 TRAF3IP3Q9Y228 551 aa21.79■■□□□ 1.08
PCDHB11-202ENST00000624887 CTAGE9A4FU28 777 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 EIF3CLB5ME19 914 aaKnown RBP21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 ARP10275 920 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 ERCC3P19447 782 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 ADAM9Q13443 819 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 TUBB2AQ13885 445 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 KNOP1Q1ED39 458 aaKnown RBP21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 RINT1Q6NUQ1 792 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 B3GNT9Q6UX72 402 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 SLC30A10Q6XR72 485 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 KRT26Q7Z3Y9 468 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 CLEC4DQ8WXI8 215 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 EIF3CQ99613 913 aaKnown RBP21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 MXRA8Q9BRK3 442 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 TUBB2BQ9BVA1 445 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 TANGO6Q9C0B7 1094 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 CNOT7Q9UIV1 285 aaKnown RBP21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 PRDM4Q9UKN5 801 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 RPTORQ8N122 1335 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 CHMP2AO43633 222 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 BMT2Q1RMZ1 405 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 ARHGAP27Q6ZUM4 889 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 MCF2L2Q86YR7 1114 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 TPH2Q8IWU9 490 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 SLC38A10Q9HBR0 1119 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 HACL1Q9UJ83 578 aa21.78■■□□□ 1.08
PCDHB11-202ENST00000624887 ASTN2O75129 1339 aaPredicted RBP21.77■■□□□ 1.08
PCDHB11-202ENST00000624887 RSPH10B2B2RC85 870 aa21.77■■□□□ 1.08
PCDHB11-202ENST00000624887 NFIBO00712 420 aa21.77■■□□□ 1.08
PCDHB11-202ENST00000624887 CETN3O15182 167 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms