RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SNAPC2Q13487 334 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 MAPK6Q16659 721 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 PRPF38AQ8NAV1 312 aaKnown RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 PIH1D3Q9NQM4 214 aaKnown RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 GARSP41250 739 aaKnown RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 ECE1P42892 770 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 VPS41P49754 854 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 NUDT18Q6ZVK8 323 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 MYLK4Q86YV6 388 aaPredicted RBP10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 MCPH1Q8NEM0 835 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 TTC25Q96NG3 672 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 ATP6V0A4Q9HBG4 840 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 KIAA1468Q9P260 1216 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 PTCH1Q13635 1447 aa10.62□□□□□ -0.71
CLTCL1-211ENST00000621271 LDHAP00338 332 aaKnown RBP10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 MTMR3Q13615 1198 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 GKAP1Q5VSY0 366 aaPredicted RBP10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 SCN4BQ8IWT1 228 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 SLC16A10Q8TF71 515 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 TBC1D22BQ9NU19 505 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 DONSONQ9NYP3 566 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 ABCB11O95342 1321 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 FAM196BA6NMK8 535 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 KCNK3O14649 394 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 ZNF18P17022 549 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 CD58P19256 250 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 SREBF2Q12772 1141 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 NCAPGQ9BPX3 1015 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 EFCAB8A8MWE9 144 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 NEMP1O14524 444 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 DDIT3P35638 169 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 ETF1P62495 437 aaKnown RBP10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 CCDC62Q6P9F0 684 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 PPFIBP2Q8ND30 876 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 RBM46Q8TBY0 533 aaKnown RBP10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 MAP4K1Q92918 833 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 CLIC6Q96NY7 704 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 FAM8A1Q9UBU6 413 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 HERC5Q9UII4 1024 aaKnown RBP10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 KDM5AP29375 1690 aaKnown RBP10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 ABCC12Q96J65 1359 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 ZC3H13Q5T200 1668 aaKnown RBP10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 HUS1O60921 280 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 TAB3Q8N5C8 712 aaPredicted RBP10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 TRIM58Q8NG06 486 aa10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 RSRC1Q96IZ7 334 aaKnown RBP10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 BZW2Q9Y6E2 419 aaKnown RBP10.61□□□□□ -0.71
CLTCL1-211ENST00000621271 ZBTB5O15062 677 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 AFPP02771 609 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 KRT76Q01546 638 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 CTTNQ14247 550 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 DENND2CQ68D51 928 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 RCSD1Q6JBY9 416 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 PSPC1Q8WXF1 523 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 ATP6V1E2Q96A05 226 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 SPATA33Q96N06 139 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 VGLL3A8MV65 326 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 CLIC2O15247 247 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 MXI1P50539 228 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 HMGCS2P54868 508 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 NKX1-1Q15270 411 aaPredicted RBP10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 ZNF827Q17R98 1081 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 DNAJC24Q6P3W2 148 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 OSBP2Q969R2 916 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 HDAC11Q96DB2 347 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 CDC42BPGQ6DT37 1551 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 NCAPD2Q15021 1401 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 A0A1B0GUA9 196 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 KRIT1O00522 736 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 PRPF3O43395 683 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 CYP21A2P08686 494 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 IQCB1Q15051 598 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 ZNF667Q5HYK9 610 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 CC2D1AQ6P1N0 951 aaPredicted RBP10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 SCARA5Q6ZMJ2 495 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 CHAMP1Q96JM3 812 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 GCOM2Q9BZD3 368 aaPredicted RBP10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 ZNF302Q9NR11 478 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 MROH7-TTC4A0A0A0MT08 1334 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 UTYO14607 1347 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 EIF3CLB5ME19 914 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 CLDN3O15551 220 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 MAP3K7O43318 606 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 SCRN1Q12765 414 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 VEPH1Q14D04 833 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 DNAAF3Q8N9W5 541 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 RILPQ96NA2 401 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 EIF3CQ99613 913 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 PLCB1Q9NQ66 1216 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 CELF2O95319 508 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 ACTN1P12814 892 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 PEX3P56589 373 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 BEST2Q8NFU1 509 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 EXOC4Q96A65 974 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 ZSWIM5Q9P217 1185 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 PCDHA6Q9UN73 950 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 AXIN2Q9Y2T1 843 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 PCDHA8Q9Y5H6 950 aa10.6□□□□□ -0.71
CLTCL1-211ENST00000621271 PLA2G4BP0C869 781 aa10.59□□□□□ -0.71
CLTCL1-211ENST00000621271 PPARGP37231 505 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms