RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 HOMER1Q86YM7 354 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 DPF3Q92784 378 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 HAS1Q92839 578 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 COL1A2P08123 1366 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 CCDC196A0A1B0GTZ2 297 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 DEXIO95424 95 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 DDIT3P35638 169 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 ARHGAP4P98171 946 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 GIMAP8Q8ND71 665 aaPredicted RBP6.5□□□□□ -1.37
FMR1-217ENST00000620828 GLT1D1Q96MS3 346 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.5□□□□□ -1.371e-7■■□□□ 11.9
FMR1-217ENST00000620828 RNPEPQ9H4A4 650 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 ANK1P16157 1881 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 MUC3AQ02505 3323 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 TTC3P53804 2025 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 ZEB2O60315 1214 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 GGPS1O95749 300 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 COL19A1Q14993 1142 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 MTMR9Q96QG7 549 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 MPHOSPH6Q99547 160 aaKnown RBP6.5□□□□□ -1.37
FMR1-217ENST00000620828 HDAC6Q9UBN7 1215 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 PFKMP08237 780 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 SMIM10L2AP0DMW4 78 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 SMIM10L2BP0DMW5 78 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 CKBP12277 381 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 NEDD9Q14511 834 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 ECM1Q16610 540 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 SEPT14Q6ZU15 432 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 CAGE1Q8TC20 777 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 LLPHQ9BRT6 129 aaKnown RBP6.5□□□□□ -1.37
FMR1-217ENST00000620828 UPF3BQ9BZI7 483 aaKnown RBP6.5□□□□□ -1.37
FMR1-217ENST00000620828 AP5M1Q9H0R1 490 aa6.5□□□□□ -1.37
FMR1-217ENST00000620828 CWC22Q9HCG8 908 aaKnown RBP6.5□□□□□ -1.37
FMR1-217ENST00000620828 RBAK-RBAKDNI3L0D1 243 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 MSH4O15457 936 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 ZNF286BP0CG31 522 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 ATN1P54259 1190 aaPredicted RBP6.49□□□□□ -1.37
FMR1-217ENST00000620828 LRCH3Q96II8 777 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 ATP11BQ9Y2G3 1177 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 CTDP1Q9Y5B0 961 aaPredicted RBP6.49□□□□□ -1.37
FMR1-217ENST00000620828 MORC2Q9Y6X9 1032 aaPredicted RBP6.49□□□□□ -1.37
FMR1-217ENST00000620828 HTRA4P83105 476 aaPredicted RBP6.49□□□□□ -1.37
FMR1-217ENST00000620828 FPGSQ05932 587 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 PPP2R5CQ13362 524 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 PLCB4Q15147 1175 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 PLEKHG4Q58EX7 1191 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 SAMD1Q6SPF0 538 aaPredicted RBP6.49□□□□□ -1.37
FMR1-217ENST00000620828 OXER1Q8TDS5 423 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 SEC63Q9UGP8 760 aaKnown RBP6.49□□□□□ -1.37
FMR1-217ENST00000620828 ARHGEF15O94989 841 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 CHRNA1P02708 482 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 ZNF200P98182 395 aaPredicted RBP6.49□□□□□ -1.37
FMR1-217ENST00000620828 CUL4AQ13619 759 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 NFXL1Q6ZNB6 911 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 RUFY4Q6ZNE9 571 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 SQORQ9Y6N5 450 aa6.49□□□□□ -1.37
FMR1-217ENST00000620828 SETQ01105 290 aaPredicted RBP6.48□□□□□ -1.37
FMR1-217ENST00000620828 PPP4R3CPQ6ZMV5 832 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 CYFIP1Q7L576 1253 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 HEATR3Q7Z4Q2 680 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 LINC01599Q8WXQ3 324 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 KCNN1Q92952 543 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 CDHR1Q96JP9 859 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 CXXC1Q9P0U4 656 aaPredicted RBP6.48□□□□□ -1.37
FMR1-217ENST00000620828 CSF2RAP15509 400 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 U2AF2P26368 475 aaKnown RBP eCLIP6.48□□□□□ -1.371e-8■■■■□ 21.2
FMR1-217ENST00000620828 MTMR1Q13613 665 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 ZNF746Q6NUN9 644 aaPredicted RBP6.48□□□□□ -1.37
FMR1-217ENST00000620828 LMBR1Q8WVP7 490 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 ZFP91Q96JP5 570 aaPredicted RBP6.48□□□□□ -1.37
FMR1-217ENST00000620828 PGBD1Q96JS3 809 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 SPATA33Q96N06 139 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 RIT2Q99578 217 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 KATNAL1Q9BW62 490 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 NIFKQ9BYG3 293 aaKnown RBP6.48□□□□□ -1.37
FMR1-217ENST00000620828 MTMR10Q9NXD2 777 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 VPS54Q9P1Q0 977 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 WRAP73Q9P2S5 460 aaPredicted RBP6.48□□□□□ -1.37
FMR1-217ENST00000620828 SLC37A4O43826 429 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 ZNF862O60290 1169 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 MMP1P03956 469 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 ANKRD1Q15327 319 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 KIAA0753Q2KHM9 967 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 ZNF689Q96CS4 500 aaPredicted RBP6.48□□□□□ -1.37
FMR1-217ENST00000620828 BACH2Q9BYV9 841 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 GJB4Q9NTQ9 266 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 PQBP1O60828 265 aaKnown RBP6.48□□□□□ -1.37
FMR1-217ENST00000620828 GPR32O75388 356 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 BAIAP3O94812 1187 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 SUPT20HL2P0C7V6 817 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 CYP2C18P33260 490 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 NAPAP54920 295 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 ACTR2P61160 394 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 MDM2Q00987 491 aaPredicted RBP6.48□□□□□ -1.37
FMR1-217ENST00000620828 CCDC60Q8IWA6 550 aaPredicted RBP6.48□□□□□ -1.37
FMR1-217ENST00000620828 PHOSPHO2Q8TCD6 241 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 YBX2Q9Y2T7 364 aaKnown RBP6.48□□□□□ -1.37
FMR1-217ENST00000620828 PCDHA2Q9Y5H9 948 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 NRCAMQ92823 1304 aa6.48□□□□□ -1.37
FMR1-217ENST00000620828 TSC2P49815 1807 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms