RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 LRRC7Q96NW7 1537 aa11.97□□□□□ -0.49
SHANK2-219ENST00000606715 KBTBD13C9JR72 458 aa11.97□□□□□ -0.49
SHANK2-219ENST00000606715 CASQ2O14958 399 aaPredicted RBP11.97□□□□□ -0.49
SHANK2-219ENST00000606715 ZNF75DP51815 510 aa11.97□□□□□ -0.49
SHANK2-219ENST00000606715 ADAM9Q13443 819 aa11.97□□□□□ -0.49
SHANK2-219ENST00000606715 PNMA8AQ86V59 439 aaPredicted RBP11.97□□□□□ -0.49
SHANK2-219ENST00000606715 RBM46Q8TBY0 533 aaKnown RBP11.97□□□□□ -0.49
SHANK2-219ENST00000606715 MCUR1Q96AQ8 359 aa11.97□□□□□ -0.49
SHANK2-219ENST00000606715 SLF1Q9BQI6 1058 aa11.97□□□□□ -0.49
SHANK2-219ENST00000606715 VCXQ9H320 206 aa11.97□□□□□ -0.49
SHANK2-219ENST00000606715 SYNDIG1Q9H7V2 258 aa11.97□□□□□ -0.49
SHANK2-219ENST00000606715 NXF1Q9UBU9 619 aaKnown RBP11.97□□□□□ -0.49
SHANK2-219ENST00000606715 USP32Q8NFA0 1604 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 NBPF26B4DH59 902 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 ADCY8P40145 1251 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 MYL7Q01449 175 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 STRIP1Q5VSL9 837 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 NBPF10Q6P3W6 841 aaKnown RBP11.96□□□□□ -0.49
SHANK2-219ENST00000606715 RNF207Q6ZRF8 634 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 NBPF15Q8N660 670 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 FAM76AQ8TAV0 307 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 TBCKQ8TEA7 893 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 CDKL2Q92772 493 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 VCX3BQ9H321 246 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 REREQ9P2R6 1566 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 GH2P01242 217 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 ARL4AP40617 200 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 NAA25Q14CX7 972 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 NECTIN1Q15223 517 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 SURF1Q15526 300 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 KAZNQ674X7 775 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 RCSD1Q6JBY9 416 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 TAB3Q8N5C8 712 aaPredicted RBP11.96□□□□□ -0.49
SHANK2-219ENST00000606715 RNF217Q8TC41 542 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 OTUD5Q96G74 571 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 FAM167AQ96KS9 214 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.96□□□□□ -0.49
SHANK2-219ENST00000606715 PCDHA7Q9UN72 937 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 EBAG9O00559 213 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 MED7O43513 233 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 MMP14P50281 582 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 FBXW4P57775 412 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 GPSM2P81274 684 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 ADCK5Q3MIX3 580 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 SH2D4BQ5SQS7 431 aa11.96□□□□□ -0.49
SHANK2-219ENST00000606715 PRPF38AQ8NAV1 312 aaKnown RBP11.96□□□□□ -0.49
SHANK2-219ENST00000606715 SH3RF3Q8TEJ3 882 aaPredicted RBP11.96□□□□□ -0.49
SHANK2-219ENST00000606715 DHTKD1Q96HY7 919 aaPredicted RBP11.96□□□□□ -0.49
SHANK2-219ENST00000606715 KIAA1210Q9ULL0 1709 aa11.96□□□□□ -0.5
SHANK2-219ENST00000606715 USP17L10C9JJH3 530 aa11.96□□□□□ -0.5
SHANK2-219ENST00000606715 CYP2E1P05181 493 aaPredicted RBP11.96□□□□□ -0.5
SHANK2-219ENST00000606715 EIF2AK2P19525 551 aaKnown RBP11.96□□□□□ -0.5
SHANK2-219ENST00000606715 CDR2Q01850 454 aa11.96□□□□□ -0.5
SHANK2-219ENST00000606715 TWF2Q6IBS0 349 aaKnown RBP11.96□□□□□ -0.5
SHANK2-219ENST00000606715 SIRT2Q8IXJ6 389 aa11.96□□□□□ -0.5
SHANK2-219ENST00000606715 SYMPKQ92797 1274 aaKnown RBP11.96□□□□□ -0.5
SHANK2-219ENST00000606715 DYNLL2Q96FJ2 89 aa11.96□□□□□ -0.5
SHANK2-219ENST00000606715 ABCB11O95342 1321 aa11.96□□□□□ -0.5
SHANK2-219ENST00000606715 MST1RQ04912 1400 aa11.96□□□□□ -0.5
SHANK2-219ENST00000606715 PPFIA4O75335 1185 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 RPS12P25398 132 aaKnown RBP11.95□□□□□ -0.5
SHANK2-219ENST00000606715 PNOCQ13519 176 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 MORC3Q14149 939 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 LONRF3Q496Y0 759 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 PPP4R4Q6NUP7 873 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 CC2D1AQ6P1N0 951 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-219ENST00000606715 PSMB7Q99436 277 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 MTFR1LQ9H019 292 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 KCNJ18B7U540 433 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 JAK3P52333 1124 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 KCNJ12Q14500 433 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 PPP2R5EQ16537 467 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 SPATA1Q5VX52 437 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 FARP1Q9Y4F1 1045 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-219ENST00000606715 PNPLA7Q6ZV29 1317 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 KIF3CO14782 793 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 PRDX5P30044 214 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 ZNF157P51786 506 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-219ENST00000606715 CUL4AQ13619 759 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 CFAP221Q4G0U5 840 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 OR8K1Q8NGG5 319 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 TCP11Q8WWU5 503 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 VPS18Q9P253 973 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 DEPDC5O75140 1603 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 STK36Q9NRP7 1315 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 PPARGP37231 505 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-219ENST00000606715 TDRD3Q9H7E2 651 aaKnown RBP11.95□□□□□ -0.5
SHANK2-219ENST00000606715 SMYD2Q9NRG4 433 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 CAMTA2O94983 1202 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 TSPY1Q01534 308 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 MIPOL1Q8TD10 442 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 IFIH1Q9BYX4 1025 aaKnown RBP11.95□□□□□ -0.5
SHANK2-219ENST00000606715 RAB17Q9H0T7 212 aa11.95□□□□□ -0.5
SHANK2-219ENST00000606715 ZBTB5O15062 677 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 FOXO4P98177 505 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 KIF23Q02241 960 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-219ENST00000606715 STXBP2Q15833 593 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 ARL13BQ3SXY8 428 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 RAPH1Q70E73 1250 aa11.94□□□□□ -0.5
SHANK2-219ENST00000606715 GTF3C2Q8WUA4 911 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms