RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 CNKSR1Q969H4 720 aa10.85□□□□□ -0.67
HCG18-242ENST00000602319 TRIM6Q9C030 488 aaPredicted RBP10.85□□□□□ -0.67
HCG18-242ENST00000602319 MAD2L2Q9UI95 211 aa10.85□□□□□ -0.67
HCG18-242ENST00000602319 C15orf41Q9Y2V0 281 aa10.85□□□□□ -0.67
HCG18-242ENST00000602319 XIRP1Q702N8 1843 aaKnown RBP10.84□□□□□ -0.67
HCG18-242ENST00000602319 A0A0A6YYK5 440 aaPredicted RBP10.84□□□□□ -0.67
HCG18-242ENST00000602319 DCDC2CA8MYV0 355 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 SART1O43290 800 aaKnown RBP10.84□□□□□ -0.67
HCG18-242ENST00000602319 FAM83BQ5T0W9 1011 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 DNAJC10Q8IXB1 793 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 HELBQ8NG08 1087 aaPredicted RBP10.84□□□□□ -0.67
HCG18-242ENST00000602319 PGM2Q96G03 612 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.84□□□□□ -0.67
HCG18-242ENST00000602319 MMRN2Q9H8L6 949 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 LRRC4CQ9HCJ2 640 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 CYP2D7A0A087X1C5 515 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 CLNS1AP54105 237 aaKnown RBP10.84□□□□□ -0.67
HCG18-242ENST00000602319 ZKSCAN8Q15776 578 aaPredicted RBP10.84□□□□□ -0.67
HCG18-242ENST00000602319 GALNTL6Q49A17 601 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 ACCSLQ4AC99 568 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 LRCH2Q5VUJ6 765 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 FAM212AQ96EL1 285 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 CEP63Q96MT8 703 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 PNMA5Q96PV4 448 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 CCDC194A0A1B0GVG4 234 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 ANKRD33BA6NCL7 494 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 MYMKA6NI61 221 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 FXR2P51116 673 aaKnown RBP eCLIP10.84□□□□□ -0.67
HCG18-242ENST00000602319 INHBEP58166 350 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 TMEM119Q4V9L6 283 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 CCDC197Q8NCU1 140 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 RASGRP4Q8TDF6 673 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 TMEM109Q9BVC6 243 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 ZMYND12Q9H0C1 365 aa10.84□□□□□ -0.67
HCG18-242ENST00000602319 PGRMC1O00264 195 aaKnown RBP10.83□□□□□ -0.68
HCG18-242ENST00000602319 NMT2O60551 498 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 NPEPPSP55786 919 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 MAGOHP61326 146 aaKnown RBP10.83□□□□□ -0.68
HCG18-242ENST00000602319 LMNB2Q03252 620 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 INF2Q27J81 1249 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 MAGOHBQ96A72 148 aaKnown RBP10.83□□□□□ -0.68
HCG18-242ENST00000602319 ACSBG1Q96GR2 724 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 MTMR9Q96QG7 549 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 MOV10L1Q9BXT6 1211 aaKnown RBP10.83□□□□□ -0.68
HCG18-242ENST00000602319 FAM114A2Q9NRY5 505 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 ZDHHC18Q9NUE0 388 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 TCP11L1Q9NUJ3 509 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 TRMT112Q9UI30 125 aaKnown RBP10.83□□□□□ -0.68
HCG18-242ENST00000602319 NOVA2Q9UNW9 492 aaKnown RBP10.83□□□□□ -0.68
HCG18-242ENST00000602319 NOC2LQ9Y3T9 749 aaKnown RBP10.83□□□□□ -0.68
HCG18-242ENST00000602319 FOCADQ5VW36 1801 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 A0A087X0T9 212 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 FAM228BP0C875 321 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 CYP19A1P11511 503 aaPredicted RBP10.83□□□□□ -0.68
HCG18-242ENST00000602319 DGKHQ86XP1 1220 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 TRIM59Q8IWR1 403 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 GPKOWQ92917 476 aaPredicted RBP eCLIP10.83□□□□□ -0.68
HCG18-242ENST00000602319 PACSIN1Q9BY11 444 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 CENPHQ9H3R5 247 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 LRP2BPQ9P2M1 347 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 SUCLA2Q9P2R7 463 aaPredicted RBP10.83□□□□□ -0.68
HCG18-242ENST00000602319 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.83□□□□□ -0.68
HCG18-242ENST00000602319 PHF20L1A8MW92 1017 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 PRKCIP41743 596 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 RPS6KA1Q15418 735 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 CHRNA2Q15822 529 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 CEP57Q86XR8 500 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 OLIG1Q8TAK6 271 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 HPS3Q969F9 1004 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 EEF2KMTQ96G04 330 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 SLC39A2Q9NP94 309 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 PACSIN2Q9UNF0 486 aaPredicted RBP10.83□□□□□ -0.68
HCG18-242ENST00000602319 COL4A3BPQ9Y5P4 624 aa10.83□□□□□ -0.68
HCG18-242ENST00000602319 SMNDC1O75940 238 aaKnown RBP eCLIP10.82□□□□□ -0.68
HCG18-242ENST00000602319 STARD3NLO95772 234 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 DYNLL1P63167 89 aaKnown RBP10.82□□□□□ -0.68
HCG18-242ENST00000602319 SEPT2Q15019 361 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 MSL1Q68DK7 614 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 KRT25Q7Z3Z0 450 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 KLHL7Q8IXQ5 586 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 HES6Q96HZ4 224 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 RSRC1Q96IZ7 334 aaKnown RBP10.82□□□□□ -0.68
HCG18-242ENST00000602319 SCLT1Q96NL6 688 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 PLIN2Q99541 437 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 INTUQ9ULD6 942 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 SNAP23O00161 211 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 CYTH3O43739 400 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 GNAQP50148 359 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 EVX2Q03828 476 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 SV2BQ7L1I2 683 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 BZW1Q7L1Q6 419 aaKnown RBP10.82□□□□□ -0.68
HCG18-242ENST00000602319 CACNA2D4Q7Z3S7 1137 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 IRF2BP2Q7Z5L9 587 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 DDX42Q86XP3 938 aaKnown RBP eCLIP10.82□□□□□ -0.68
HCG18-242ENST00000602319 TBC1D5Q92609 795 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 STAMBPL1Q96FJ0 436 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 ANKRD27Q96NW4 1050 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 HOMER3Q9NSC5 361 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 SLC5A4Q9NY91 659 aa10.82□□□□□ -0.68
HCG18-242ENST00000602319 ARPP21Q9UBL0 812 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms