RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 RBM47A0AV96 593 aaKnown RBP20.84■□□□□ 0.93
SSBP4-212ENST00000601919 SNAI1O95863 264 aaPredicted RBP20.84■□□□□ 0.93
SSBP4-212ENST00000601919 UBA1P22314 1058 aaKnown RBP20.84■□□□□ 0.93
SSBP4-212ENST00000601919 FLT3LGP49771 235 aa20.84■□□□□ 0.93
SSBP4-212ENST00000601919 ACVR2BQ13705 512 aa20.84■□□□□ 0.93
SSBP4-212ENST00000601919 HYIQ5T013 277 aa20.84■□□□□ 0.93
SSBP4-212ENST00000601919 KRBA2Q6ZNG9 492 aa20.84■□□□□ 0.93
SSBP4-212ENST00000601919 EIF2AK1Q9BQI3 630 aaKnown RBP20.84■□□□□ 0.93
SSBP4-212ENST00000601919 TMEM63CQ9P1W3 806 aa20.84■□□□□ 0.93
SSBP4-212ENST00000601919 NRBP1Q9UHY1 535 aa20.84■□□□□ 0.93
SSBP4-212ENST00000601919 DOCK5Q9H7D0 1870 aa20.84■□□□□ 0.93
SSBP4-212ENST00000601919 EML1O00423 815 aa20.83■□□□□ 0.93
SSBP4-212ENST00000601919 TXNP10599 105 aaKnown RBP20.83■□□□□ 0.93
SSBP4-212ENST00000601919 PLCG1P19174 1290 aa20.83■□□□□ 0.93
SSBP4-212ENST00000601919 LONRF3Q496Y0 759 aa20.83■□□□□ 0.93
SSBP4-212ENST00000601919 MFSD14CQ5VZR4 134 aa20.83■□□□□ 0.93
SSBP4-212ENST00000601919 IQSEC1Q6DN90 963 aa20.83■□□□□ 0.93
SSBP4-212ENST00000601919 METTL7BQ6UX53 244 aa20.83■□□□□ 0.93
SSBP4-212ENST00000601919 CD99L2Q8TCZ2 262 aa20.83■□□□□ 0.93
SSBP4-212ENST00000601919 MLXIPQ9HAP2 919 aa20.83■□□□□ 0.93
SSBP4-212ENST00000601919 PCDHA10Q9Y5I2 948 aa20.83■□□□□ 0.93
SSBP4-212ENST00000601919 LOXHD1Q8IVV2 1947 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 A0A087X0B3 334 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 NKRFO15226 690 aaKnown RBP eCLIP20.82■□□□□ 0.92
SSBP4-212ENST00000601919 ACTN4O43707 911 aaKnown RBP20.82■□□□□ 0.92
SSBP4-212ENST00000601919 DKC1O60832 514 aaKnown RBP eCLIP20.82■□□□□ 0.92
SSBP4-212ENST00000601919 GGPS1O95749 300 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 P4HBP07237 508 aaKnown RBP20.82■□□□□ 0.92
SSBP4-212ENST00000601919 PSAPP07602 524 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 PRMT2P55345 433 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 SP2Q02086 613 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 E2F4Q16254 413 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 TMEM119Q4V9L6 283 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 TAPT1Q6NXT6 567 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 CCDC62Q6P9F0 684 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 CYFIP1Q7L576 1253 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 HSD17B14Q9BPX1 270 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 KATNBL1Q9H079 304 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 SRRDQ9UH36 339 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 SERTAD1Q9UHV2 236 aa20.82■□□□□ 0.92
SSBP4-212ENST00000601919 ZHX1Q9UKY1 873 aaPredicted RBP20.82■□□□□ 0.92
SSBP4-212ENST00000601919 AMPD3Q01432 767 aa20.81■□□□□ 0.92
SSBP4-212ENST00000601919 PRKCZQ05513 592 aa20.81■□□□□ 0.92
SSBP4-212ENST00000601919 GRB10Q13322 594 aa20.81■□□□□ 0.92
SSBP4-212ENST00000601919 LY6KQ17RY6 165 aa20.81■□□□□ 0.92
SSBP4-212ENST00000601919 CELF3Q5SZQ8 465 aaKnown RBP20.81■□□□□ 0.92
SSBP4-212ENST00000601919 MIS18BP1Q6P0N0 1132 aa20.81■□□□□ 0.92
SSBP4-212ENST00000601919 CATSPER3Q86XQ3 398 aa20.81■□□□□ 0.92
SSBP4-212ENST00000601919 DHX37Q8IY37 1157 aaKnown RBP20.81■□□□□ 0.92
SSBP4-212ENST00000601919 LRRC27Q9C0I9 530 aa20.81■□□□□ 0.92
SSBP4-212ENST00000601919 FLRT1Q9NZU1 646 aa20.81■□□□□ 0.92
SSBP4-212ENST00000601919 GABRQQ9UN88 632 aa20.81■□□□□ 0.92
SSBP4-212ENST00000601919 KIAA1024Q9UPX6 916 aa20.81■□□□□ 0.92
SSBP4-212ENST00000601919 NOP56O00567 594 aaKnown RBP20.8■□□□□ 0.92
SSBP4-212ENST00000601919 MED24O75448 989 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 FARP2O94887 1054 aaPredicted RBP20.8■□□□□ 0.92
SSBP4-212ENST00000601919 CCNE2O96020 404 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 ACTR2P61160 394 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 LAMC2Q13753 1193 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 CAMK4Q16566 473 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 CCL14Q16627 93 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 PDXDC2PQ6P474 469 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 TPH2Q8IWU9 490 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 ZNF296Q8WUU4 475 aaPredicted RBP20.8■□□□□ 0.92
SSBP4-212ENST00000601919 DYDC2Q96IM9 177 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 PNMA5Q96PV4 448 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 PLIN2Q99541 437 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 ZSWIM4Q9H7M6 989 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 PDGFCQ9NRA1 345 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 DNM3Q9UQ16 869 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 WDR81Q562E7 1941 aa20.8■□□□□ 0.92
SSBP4-212ENST00000601919 POTEB3A0JP26 581 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 SLITRK3O94933 977 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 ARIH2O95376 493 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 GH1P01241 217 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 IGHA2P01877 340 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 MYL1P05976 194 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 SPATA31C1P0DKV0 1188 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 QARSP47897 775 aaKnown RBP20.79■□□□□ 0.92
SSBP4-212ENST00000601919 CYP4A11Q02928 519 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 ZSCAN23Q3MJ62 389 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 DUSP28Q4G0W2 176 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 POTEBQ6S5H4 581 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 ATP6V0A1Q93050 837 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 NACC1Q96RE7 527 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 WBP1LQ9NX94 342 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 RGL1Q9NZL6 768 aa20.79■□□□□ 0.92
SSBP4-212ENST00000601919 MYH9P35579 1960 aaKnown RBP20.79■□□□□ 0.92
SSBP4-212ENST00000601919 SUPT20HL2P0C7V6 817 aa20.78■□□□□ 0.92
SSBP4-212ENST00000601919 CYP2C19P33261 490 aa20.78■□□□□ 0.92
SSBP4-212ENST00000601919 PSMC5P62195 406 aa20.78■□□□□ 0.92
SSBP4-212ENST00000601919 SP4Q02446 784 aa20.78■□□□□ 0.92
SSBP4-212ENST00000601919 CTTNQ14247 550 aaKnown RBP20.78■□□□□ 0.92
SSBP4-212ENST00000601919 CCDC144BQ3MJ40 725 aa20.78■□□□□ 0.92
SSBP4-212ENST00000601919 NAALADL2Q58DX5 795 aa20.78■□□□□ 0.92
SSBP4-212ENST00000601919 SV2BQ7L1I2 683 aa20.78■□□□□ 0.92
SSBP4-212ENST00000601919 RAET1EQ8TD07 263 aa20.78■□□□□ 0.92
SSBP4-212ENST00000601919 SEPT1Q8WYJ6 367 aa20.78■□□□□ 0.92
SSBP4-212ENST00000601919 LARP4BQ92615 738 aaKnown RBP20.78■□□□□ 0.92
SSBP4-212ENST00000601919 RAD54LQ92698 747 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms