RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PCDHB6Q9Y5E3 794 aa21.34■■□□□ 1.01
CCDC9-205ENST00000600117 GGPS1O95749 300 aa21.33■■□□□ 1.01
CCDC9-205ENST00000600117 GH1P01241 217 aa21.33■■□□□ 1.01
CCDC9-205ENST00000600117 RARBP10826 455 aa21.33■■□□□ 1.01
CCDC9-205ENST00000600117 NKX3-2P78367 333 aa21.33■■□□□ 1.01
CCDC9-205ENST00000600117 ORC2Q13416 577 aaPredicted RBP21.33■■□□□ 1.01
CCDC9-205ENST00000600117 ZNF174Q15697 407 aa21.33■■□□□ 1.01
CCDC9-205ENST00000600117 CELF3Q5SZQ8 465 aaKnown RBP21.33■■□□□ 1.01
CCDC9-205ENST00000600117 TLK2Q86UE8 772 aa21.33■■□□□ 1.01
CCDC9-205ENST00000600117 SLC5A5Q92911 643 aa21.33■■□□□ 1.01
CCDC9-205ENST00000600117 UIMC1Q96RL1 719 aa21.33■■□□□ 1.01
CCDC9-205ENST00000600117 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.33■■□□□ 1.01
CCDC9-205ENST00000600117 NFASCO94856 1347 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 SYNRGQ9UMZ2 1314 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 MYH15Q9Y2K3 1946 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 IPO5O00410 1097 aaKnown RBP21.32■■□□□ 1
CCDC9-205ENST00000600117 CTAGE5O15320 804 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 DHX15O43143 795 aaKnown RBP21.32■■□□□ 1
CCDC9-205ENST00000600117 ADAMTS4O75173 837 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 MCM7P33993 719 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 GJA9P57773 515 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 IRX5P78411 483 aaPredicted RBP21.32■■□□□ 1
CCDC9-205ENST00000600117 TLE2Q04725 743 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 NEDD9Q14511 834 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 USP38Q8NB14 1042 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 HAS1Q92839 578 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 EMID1Q96A84 441 aaPredicted RBP21.32■■□□□ 1
CCDC9-205ENST00000600117 ZNF577Q9BSK1 485 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 TMEM60Q9H2L4 133 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 XPNPEP3Q9NQH7 507 aa21.32■■□□□ 1
CCDC9-205ENST00000600117 DYNC1LI2O43237 492 aaPredicted RBP21.31■■□□□ 1
CCDC9-205ENST00000600117 NEMFO60524 1076 aa21.31■■□□□ 1
CCDC9-205ENST00000600117 MYCNP04198 464 aaPredicted RBP21.31■■□□□ 1
CCDC9-205ENST00000600117 GRIN2CQ14957 1233 aa21.31■■□□□ 1
CCDC9-205ENST00000600117 LRRC41Q15345 812 aa21.31■■□□□ 1
CCDC9-205ENST00000600117 CYFIP1Q7L576 1253 aa21.31■■□□□ 1
CCDC9-205ENST00000600117 C4orf32Q8N8J7 132 aa21.31■■□□□ 1
CCDC9-205ENST00000600117 OR6J1Q8NGC5 347 aa21.31■■□□□ 1
CCDC9-205ENST00000600117 GJA10Q969M2 543 aa21.31■■□□□ 1
CCDC9-205ENST00000600117 FERMT2Q96AC1 680 aa21.31■■□□□ 1
CCDC9-205ENST00000600117 MYADML2A6NDP7 307 aa21.3■■□□□ 1
CCDC9-205ENST00000600117 TBX3O15119 743 aa21.3■■□□□ 1
CCDC9-205ENST00000600117 SORBS3O60504 671 aa21.3■■□□□ 1
CCDC9-205ENST00000600117 PGK1P00558 417 aa21.3■■□□□ 1
CCDC9-205ENST00000600117 LAMC2Q13753 1193 aa21.3■■□□□ 1
CCDC9-205ENST00000600117 METTL7BQ6UX53 244 aa21.3■■□□□ 1
CCDC9-205ENST00000600117 DHX37Q8IY37 1157 aaKnown RBP21.3■■□□□ 1
CCDC9-205ENST00000600117 GIMAP8Q8ND71 665 aaPredicted RBP21.3■■□□□ 1
CCDC9-205ENST00000600117 MTMR9Q96QG7 549 aa21.3■■□□□ 1
CCDC9-205ENST00000600117 CIZ1Q9ULV3 898 aaPredicted RBP21.3■■□□□ 1
CCDC9-205ENST00000600117 TELO2Q9Y4R8 837 aa21.3■■□□□ 1
CCDC9-205ENST00000600117 CHD7Q9P2D1 2997 aa21.3■■□□□ 1
CCDC9-205ENST00000600117 PSMD10O75832 226 aa21.29■■□□□ 1
CCDC9-205ENST00000600117 CLTBP09497 229 aa21.29■■□□□ 1
CCDC9-205ENST00000600117 ITGB8P26012 769 aa21.29■■□□□ 1
CCDC9-205ENST00000600117 EPHB4P54760 987 aa21.29■■□□□ 1
CCDC9-205ENST00000600117 NUCB2P80303 420 aa21.29■■□□□ 1
CCDC9-205ENST00000600117 CALCRLQ16602 461 aa21.29■■□□□ 1
CCDC9-205ENST00000600117 KLHDC9Q8NEP7 349 aa21.29■■□□□ 1
CCDC9-205ENST00000600117 FAM20AQ96MK3 541 aa21.29■■□□□ 1
CCDC9-205ENST00000600117 RIT2Q99578 217 aa21.29■■□□□ 1
CCDC9-205ENST00000600117 FTOQ9C0B1 505 aaKnown RBP eCLIP21.29■■□□□ 1
CCDC9-205ENST00000600117 AP5M1Q9H0R1 490 aa21.29■■□□□ 1
CCDC9-205ENST00000600117 MLXIPQ9HAP2 919 aa21.29■■□□□ 1
CCDC9-205ENST00000600117 TBC1D22BQ9NU19 505 aa21.29■■□□□ 1
CCDC9-205ENST00000600117 KIAA0355O15063 1070 aa21.28■■□□□ 1
CCDC9-205ENST00000600117 DNAJB2P25686 324 aa21.28■■□□□ 1
CCDC9-205ENST00000600117 CST5P28325 142 aaPredicted RBP21.28■■□□□ 1
CCDC9-205ENST00000600117 HSDL1Q3SXM5 330 aa21.28■■□□□ 1
CCDC9-205ENST00000600117 CCSAPQ6IQ19 270 aaPredicted RBP21.28■■□□□ 1
CCDC9-205ENST00000600117 B3GNT9Q6UX72 402 aa21.28■■□□□ 1
CCDC9-205ENST00000600117 AFG1LQ8WV93 481 aa21.28■■□□□ 1
CCDC9-205ENST00000600117 SPATA33Q96N06 139 aa21.28■■□□□ 1
CCDC9-205ENST00000600117 SDF4Q9BRK5 362 aa21.28■■□□□ 1
CCDC9-205ENST00000600117 JPH1Q9HDC5 661 aaPredicted RBP21.28■■□□□ 1
CCDC9-205ENST00000600117 PHF24Q9UPV7 400 aa21.28■■□□□ 1
CCDC9-205ENST00000600117 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.27■■□□□ 1
CCDC9-205ENST00000600117 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.27■■□□□ 1
CCDC9-205ENST00000600117 A6NJR5 290 aa21.27■■□□□ 1
CCDC9-205ENST00000600117 CCNE2O96020 404 aa21.27■■□□□ 1
CCDC9-205ENST00000600117 OR52Z1P0C646 297 aa21.27■■□□□ 1
CCDC9-205ENST00000600117 C6orf222P0C671 652 aaPredicted RBP21.27■■□□□ 1
CCDC9-205ENST00000600117 BEX3Q00994 111 aa21.27■■□□□ 1
CCDC9-205ENST00000600117 PTGDRQ13258 359 aa21.27■■□□□ 1
CCDC9-205ENST00000600117 LRCH2Q5VUJ6 765 aa21.27■■□□□ 1
CCDC9-205ENST00000600117 PPTC7Q8NI37 304 aa21.27■■□□□ 1
CCDC9-205ENST00000600117 USP28Q96RU2 1077 aa21.27■■□□□ 1
CCDC9-205ENST00000600117 SPC25Q9HBM1 224 aa21.27■■□□□ 1
CCDC9-205ENST00000600117 SLC9A2Q9UBY0 812 aa21.27■■□□□ 1
CCDC9-205ENST00000600117 CLIC4Q9Y696 253 aa21.27■■□□□ 1
CCDC9-205ENST00000600117 REV3LO60673 3130 aa21.27■□□□□ 0.99
CCDC9-205ENST00000600117 DDX39AO00148 427 aaKnown RBP21.26■□□□□ 0.99
CCDC9-205ENST00000600117 GAS7O60861 476 aa21.26■□□□□ 0.99
CCDC9-205ENST00000600117 MMP3P08254 477 aa21.26■□□□□ 0.99
CCDC9-205ENST00000600117 HOXD8P13378 290 aaPredicted RBP21.26■□□□□ 0.99
CCDC9-205ENST00000600117 RAG1P15918 1043 aa21.26■□□□□ 0.99
CCDC9-205ENST00000600117 ATP2C1P98194 919 aaPredicted RBP21.26■□□□□ 0.99
CCDC9-205ENST00000600117 FPGSQ05932 587 aa21.26■□□□□ 0.99
CCDC9-205ENST00000600117 SF3A1Q15459 793 aaKnown RBP21.26■□□□□ 0.99
CCDC9-205ENST00000600117 FSCN1Q16658 493 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms