RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 FRMPD4Q14CM0 1322 aa10.55□□□□□ -0.72
VPS25-205ENST00000590339 LOXHD1Q8IVV2 1947 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 CENPFP49454 3210 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 IGLV3-22A0A075B6J6 115 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 STRNO43815 780 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 RHOBTB3O94955 611 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 PGK2P07205 417 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 FCER1AP12319 257 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 HSD17B4P51659 736 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 FANCCQ00597 558 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 PRAMEF19Q5SWL8 479 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 MAP3K21Q5TCX8 1036 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 ZNF658Q5TYW1 1059 aaPredicted RBP10.54□□□□□ -0.72
VPS25-205ENST00000590339 CCDC174Q6PII3 467 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 NECAB2Q7Z6G3 386 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 UBE2Q1Q7Z7E8 422 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 PRPF38AQ8NAV1 312 aaKnown RBP10.54□□□□□ -0.72
VPS25-205ENST00000590339 SHCBP1Q8NEM2 672 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 CALML4Q96GE6 196 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 MMP19Q99542 508 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 C7orf25Q9BPX7 421 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 TRIM9Q9C026 710 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 TTC12Q9H892 705 aaPredicted RBP10.54□□□□□ -0.72
VPS25-205ENST00000590339 SLC38A10Q9HBR0 1119 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 ADAMTS5Q9UNA0 930 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 LCTP09848 1927 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 KDM3AQ9Y4C1 1321 aa10.54□□□□□ -0.72
VPS25-205ENST00000590339 FAM86B1E9PN63 330 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 GCOM1H8Y6P7 765 aaPredicted RBP10.53□□□□□ -0.72
VPS25-205ENST00000590339 EVI5O60447 810 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 ZBED4O75132 1171 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 SLC25A27O95847 323 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 MYCNP04198 464 aaPredicted RBP10.53□□□□□ -0.72
VPS25-205ENST00000590339 HOXC6P09630 235 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 FAM86B2P0C5J1 330 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 POLR2MP0CAP2 368 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 FDX1P10109 184 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 ATP1A3P13637 1013 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 MSNP26038 577 aaKnown RBP10.53□□□□□ -0.72
VPS25-205ENST00000590339 HOXA13P31271 388 aaPredicted RBP10.53□□□□□ -0.72
VPS25-205ENST00000590339 KCTD2Q14681 263 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 CCDC144BQ3MJ40 725 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 COBLL1Q53SF7 1204 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 CDKAL1Q5VV42 579 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 RIOX2Q8IUF8 465 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 SLFN12Q8IYM2 578 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 SPC24Q8NBT2 197 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 RASSF8Q8NHQ8 419 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 SNX29Q8TEQ0 813 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 CLEC4DQ8WXI8 215 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 RAD54LQ92698 747 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 FAM20AQ96MK3 541 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 XPO4Q9C0E2 1151 aaKnown RBP10.53□□□□□ -0.72
VPS25-205ENST00000590339 RAVER2Q9HCJ3 691 aaKnown RBP10.53□□□□□ -0.72
VPS25-205ENST00000590339 FANCLQ9NW38 375 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 SLC5A4Q9NY91 659 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 IFNKQ9P0W0 207 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 VAV3Q9UKW4 847 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 PNMA2Q9UL42 364 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 NFE2L3Q9Y4A8 694 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 RIPK3Q9Y572 518 aa10.53□□□□□ -0.72
VPS25-205ENST00000590339 CBFA2T2O43439 604 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 PTGS1P23219 599 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 KMT5BQ4FZB7 885 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 SPATA1Q5VX52 437 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 KRT79Q5XKE5 535 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 LHX8Q68G74 356 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 SNRNP48Q6IEG0 339 aaKnown RBP10.52□□□□□ -0.73
VPS25-205ENST00000590339 APTXQ7Z2E3 356 aaKnown RBP10.52□□□□□ -0.73
VPS25-205ENST00000590339 KCNK18Q7Z418 384 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 SMYD4Q8IYR2 804 aaPredicted RBP10.52□□□□□ -0.73
VPS25-205ENST00000590339 SAMD3Q8N6K7 520 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 GIMAP8Q8ND71 665 aaPredicted RBP10.52□□□□□ -0.73
VPS25-205ENST00000590339 TRPV1Q8NER1 839 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 REPS2Q8NFH8 660 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 TBC1D5Q92609 795 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 LARP4BQ92615 738 aaKnown RBP10.52□□□□□ -0.73
VPS25-205ENST00000590339 GTPBP4Q9BZE4 634 aaKnown RBP10.52□□□□□ -0.73
VPS25-205ENST00000590339 C11orf49Q9H6J7 331 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 EHMT1Q9H9B1 1298 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 INTS13Q9NVM9 706 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 IMPACTQ9P2X3 320 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 RWDD2AQ9UIY3 292 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 ZNF214Q9UL59 606 aaPredicted RBP10.52□□□□□ -0.73
VPS25-205ENST00000590339 OGDHLQ9ULD0 1010 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 CCPG1Q9ULG6 757 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 COLQQ9Y215 455 aaPredicted RBP10.52□□□□□ -0.73
VPS25-205ENST00000590339 NR2E3Q9Y5X4 410 aa10.52□□□□□ -0.73
VPS25-205ENST00000590339 MGAMO43451 1857 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 LRRC37A2A6NM11 1700 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 MSH4O15457 936 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 CFBP00751 764 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 CAPN2P17655 700 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 MNX1P50219 401 aaPredicted RBP10.51□□□□□ -0.73
VPS25-205ENST00000590339 AMPD3Q01432 767 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 EHHADHQ08426 723 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 PAK1Q13153 545 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 ECM1Q16610 540 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 PRR16Q569H4 304 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 CHRDL2Q6WN34 429 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms