RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 DIS3L2Q8IYB7 885 aaKnown RBP16.6■□□□□ 0.25
CXXC1-213ENST00000590234 PPP1R12CQ9BZL4 782 aa16.6■□□□□ 0.25
CXXC1-213ENST00000590234 UBE2OQ9C0C9 1292 aaKnown RBP16.6■□□□□ 0.25
CXXC1-213ENST00000590234 PRO3102Q9H379 93 aa16.6■□□□□ 0.25
CXXC1-213ENST00000590234 TBC1D22BQ9NU19 505 aa16.6■□□□□ 0.25
CXXC1-213ENST00000590234 HDAC6Q9UBN7 1215 aa16.6■□□□□ 0.25
CXXC1-213ENST00000590234 GTF2IRD1Q9UHL9 959 aa16.6■□□□□ 0.25
CXXC1-213ENST00000590234 NOD1Q9Y239 953 aa16.6■□□□□ 0.25
CXXC1-213ENST00000590234 CYP3A7-CYP3A51PA0A087WV96 503 aa16.59■□□□□ 0.25
CXXC1-213ENST00000590234 TDP2O95551 362 aa16.59■□□□□ 0.25
CXXC1-213ENST00000590234 CYP3A7P24462 503 aa16.59■□□□□ 0.25
CXXC1-213ENST00000590234 ACTR2P61160 394 aa16.59■□□□□ 0.25
CXXC1-213ENST00000590234 PTGISQ16647 500 aa16.59■□□□□ 0.25
CXXC1-213ENST00000590234 LETM2Q2VYF4 491 aa16.59■□□□□ 0.25
CXXC1-213ENST00000590234 Q4G0T1 1027 aa16.59■□□□□ 0.25
CXXC1-213ENST00000590234 GDF6Q6KF10 455 aaPredicted RBP16.59■□□□□ 0.25
CXXC1-213ENST00000590234 NEK8Q86SG6 692 aa16.59■□□□□ 0.25
CXXC1-213ENST00000590234 UIMC1Q96RL1 719 aa16.59■□□□□ 0.25
CXXC1-213ENST00000590234 HIPK3Q9H422 1215 aa16.59■□□□□ 0.25
CXXC1-213ENST00000590234 TCEAL9Q9UHQ7 104 aa16.59■□□□□ 0.25
CXXC1-213ENST00000590234 EMSYQ7Z589 1322 aa16.59■□□□□ 0.25
CXXC1-213ENST00000590234 BTBD18B2RXH4 712 aa16.58■□□□□ 0.24
CXXC1-213ENST00000590234 MSH4O15457 936 aa16.58■□□□□ 0.24
CXXC1-213ENST00000590234 DHX15O43143 795 aaKnown RBP16.58■□□□□ 0.24
CXXC1-213ENST00000590234 CYP2C9P11712 490 aa16.58■□□□□ 0.24
CXXC1-213ENST00000590234 GUCY1B3Q02153 619 aa16.58■□□□□ 0.24
CXXC1-213ENST00000590234 SAFBQ15424 915 aaKnown RBP eCLIP16.58■□□□□ 0.24
CXXC1-213ENST00000590234 EARS2Q5JPH6 523 aaKnown RBP16.58■□□□□ 0.24
CXXC1-213ENST00000590234 MFSD5Q6N075 450 aa16.58■□□□□ 0.24
CXXC1-213ENST00000590234 GLG1Q92896 1179 aa16.58■□□□□ 0.24
CXXC1-213ENST00000590234 TNFRSF25Q93038 417 aa16.58■□□□□ 0.24
CXXC1-213ENST00000590234 MBOAT7Q96N66 472 aa16.58■□□□□ 0.24
CXXC1-213ENST00000590234 NOC4LQ9BVI4 516 aaKnown RBP16.58■□□□□ 0.24
CXXC1-213ENST00000590234 SMARCAD1Q9H4L7 1026 aa16.58■□□□□ 0.24
CXXC1-213ENST00000590234 AZI2Q9H6S1 392 aa16.58■□□□□ 0.24
CXXC1-213ENST00000590234 ERAP1Q9NZ08 941 aa16.58■□□□□ 0.24
CXXC1-213ENST00000590234 KIF3AQ9Y496 699 aa16.58■□□□□ 0.24
CXXC1-213ENST00000590234 C17orf102A2RUQ5 167 aa16.57■□□□□ 0.24
CXXC1-213ENST00000590234 FAM205CA6NFA0 338 aa16.57■□□□□ 0.24
CXXC1-213ENST00000590234 LGR5O75473 907 aa16.57■□□□□ 0.24
CXXC1-213ENST00000590234 ATG7O95352 703 aa16.57■□□□□ 0.24
CXXC1-213ENST00000590234 CCNE2O96020 404 aa16.57■□□□□ 0.24
CXXC1-213ENST00000590234 SMIM10L2AP0DMW4 78 aa16.57■□□□□ 0.24
CXXC1-213ENST00000590234 SMIM10L2BP0DMW5 78 aa16.57■□□□□ 0.24
CXXC1-213ENST00000590234 GCFC2P16383 781 aaKnown RBP16.57■□□□□ 0.24
CXXC1-213ENST00000590234 KRT76Q01546 638 aa16.57■□□□□ 0.24
CXXC1-213ENST00000590234 FPGSQ05932 587 aa16.57■□□□□ 0.24
CXXC1-213ENST00000590234 ZNF746Q6NUN9 644 aaPredicted RBP16.57■□□□□ 0.24
CXXC1-213ENST00000590234 TMEM199Q8N511 208 aa16.57■□□□□ 0.24
CXXC1-213ENST00000590234 FBXO18Q8NFZ0 1043 aa16.57■□□□□ 0.24
CXXC1-213ENST00000590234 NAP1L4Q99733 375 aaKnown RBP16.57■□□□□ 0.24
CXXC1-213ENST00000590234 DDX25Q9UHL0 483 aaKnown RBP16.57■□□□□ 0.24
CXXC1-213ENST00000590234 UMODL1Q5DID0 1318 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 A0A1W2PPC1 479 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 CCNT1O60563 726 aaKnown RBP16.56■□□□□ 0.24
CXXC1-213ENST00000590234 GAS7O60861 476 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 MARK3P27448 753 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 CYP2C18P33260 490 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 LRCH2Q5VUJ6 765 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 PPP4R3AQ6IN85 833 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 MIS18BP1Q6P0N0 1132 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 SMAP1Q8IYB5 467 aaPredicted RBP16.56■□□□□ 0.24
CXXC1-213ENST00000590234 SLC5A5Q92911 643 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 CTAGE1Q96RT6 745 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 PCYT2Q99447 389 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 RIT2Q99578 217 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 TEKT3Q9BXF9 490 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 RNPEPQ9H4A4 650 aa16.56■□□□□ 0.24
CXXC1-213ENST00000590234 BACH1O14867 736 aa16.55■□□□□ 0.24
CXXC1-213ENST00000590234 SLC37A4O43826 429 aa16.55■□□□□ 0.24
CXXC1-213ENST00000590234 HOXC8P31273 242 aa16.55■□□□□ 0.24
CXXC1-213ENST00000590234 STAT5BP51692 787 aa16.55■□□□□ 0.24
CXXC1-213ENST00000590234 ZNF200P98182 395 aaPredicted RBP16.55■□□□□ 0.24
CXXC1-213ENST00000590234 PPIGQ13427 754 aaKnown RBP eCLIP16.55■□□□□ 0.245e-7■■■■□ 21
CXXC1-213ENST00000590234 BFSP2Q13515 415 aa16.55■□□□□ 0.24
CXXC1-213ENST00000590234 HIC1Q14526 733 aa16.55■□□□□ 0.24
CXXC1-213ENST00000590234 HABP4Q5JVS0 413 aaKnown RBP16.55■□□□□ 0.24
CXXC1-213ENST00000590234 ABHD15Q6UXT9 468 aa16.55■□□□□ 0.24
CXXC1-213ENST00000590234 TDHQ8IZJ6 230 aa16.55■□□□□ 0.24
CXXC1-213ENST00000590234 CCDC155Q8N6L0 562 aa16.55■□□□□ 0.24
CXXC1-213ENST00000590234 CAGE1Q8TC20 777 aa16.55■□□□□ 0.24
CXXC1-213ENST00000590234 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.55■□□□□ 0.24
CXXC1-213ENST00000590234 NRCAMQ92823 1304 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 IGKV6D-21A0A0A0MT36 114 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 PITPNM1O00562 1244 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 GNAT1P11488 350 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 CSF2RAP15509 400 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 GJB2P29033 226 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 CCL23P55773 120 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 PTK7Q13308 1070 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 GNL2Q13823 731 aaKnown RBP16.54■□□□□ 0.24
CXXC1-213ENST00000590234 FAM160B1Q5W0V3 765 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 PLPPR4Q7Z2D5 763 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 ETNPPLQ8TBG4 499 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 AFAP1L1Q8TED9 768 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 ATP6V0A1Q93050 837 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 GJA10Q969M2 543 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 WNT8AQ9H1J5 351 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 FOXP1Q9H334 677 aaPredicted RBP16.54■□□□□ 0.24
CXXC1-213ENST00000590234 ZNF302Q9NR11 478 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms