RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.57■□□□□ 0.561e-8■■□□□ 13
PRKCSH-205ENST00000587327 PALMO75781 387 aa18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 SSBP05455 408 aaKnown RBP eCLIP18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 MAGEA9P43362 315 aa18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 SCNN1DP51172 638 aa18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 CORO7P57737 925 aa18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 SLC18A3Q16572 532 aa18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 GBP6Q6ZN66 633 aa18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 CLEC10AQ8IUN9 316 aa18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 TBC1D7Q9P0N9 293 aa18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 KDM3AQ9Y4C1 1321 aa18.56■□□□□ 0.56
PRKCSH-205ENST00000587327 NNTQ13423 1086 aa18.56■□□□□ 0.56
PRKCSH-205ENST00000587327 MSL1Q68DK7 614 aa18.56■□□□□ 0.56
PRKCSH-205ENST00000587327 CCDC65Q8IXS2 484 aa18.56■□□□□ 0.56
PRKCSH-205ENST00000587327 IFT20Q8IY31 132 aa18.56■□□□□ 0.56
PRKCSH-205ENST00000587327 TBC1D5Q92609 795 aa18.56■□□□□ 0.56
PRKCSH-205ENST00000587327 KIAA1024Q9UPX6 916 aa18.56■□□□□ 0.56
PRKCSH-205ENST00000587327 E9PMD0 336 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 GLI1P08151 1106 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 TTBK2Q6IQ55 1244 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 NELFCDQ8IXH7 590 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 CAPS2Q9BXY5 557 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 KCTD10Q9H3F6 313 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 PSTPIP2Q9H939 334 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 GDF3Q9NR23 364 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 USP40Q9NVE5 1235 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 AIPL1Q9NZN9 384 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 PCDHGC5Q9Y5F6 944 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 HSF2BPO75031 334 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 PLA2G4BP0C869 781 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 KLRC1P26715 233 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 APBA1Q02410 837 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 SCFD1Q8WVM8 642 aa18.55■□□□□ 0.56
PRKCSH-205ENST00000587327 ZNF646O15015 1829 aaPredicted RBP18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 GREB1LQ9C091 1923 aaPredicted RBP18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 A0A087X0T9 212 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 ZBTB5O15062 677 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 FAM228BP0C875 321 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 HERC4Q5GLZ8 1057 aaPredicted RBP18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 MEI1Q5TIA1 1274 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 CDC42EP5Q6NZY7 148 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 FLAD1Q8NFF5 587 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 RUFY1Q96T51 708 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 KANSL2Q9H9L4 492 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 EMILIN3Q9NT22 766 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 SWAP70Q9UH65 585 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 C10orf71Q711Q0 1435 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 TNS1Q9HBL0 1735 aaKnown RBP18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 GRID2IPA4D2P6 1211 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 FTCDO95954 541 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 RAPGEF1Q13905 1077 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 KIAA0753Q2KHM9 967 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 GPATCH4Q5T3I0 446 aaKnown RBP18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 APOBEC3HQ6NTF7 200 aaKnown RBP18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 HHIPL2Q6UWX4 724 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 ZC3H3Q8IXZ2 948 aaKnown RBP18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 NAP1L4Q99733 375 aaKnown RBP18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 ADAMTS1Q9UHI8 967 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 SERPINB13Q9UIV8 391 aa18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 ATF5Q9Y2D1 282 aaPredicted RBP18.54■□□□□ 0.56
PRKCSH-205ENST00000587327 NPHP3-ACAD11A0A0J9YXS1 232 aa18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 USP17L10C9JJH3 530 aa18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 SHMT1P34896 483 aa18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 SLC16A2P36021 539 aa18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 CARSP49589 748 aaKnown RBP18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 ARID5AQ03989 594 aa18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 KLHL30Q0D2K2 578 aa18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 SF3B2Q13435 895 aaKnown RBP18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 ADAM9Q13443 819 aa18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 TTMPQ5BVD1 217 aa18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 GPBP1Q86WP2 473 aa18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 ARL8AQ96BM9 186 aa18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 DBNDD1Q9H9R9 158 aa18.53■□□□□ 0.56
PRKCSH-205ENST00000587327 MYO3BQ8WXR4 1341 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 SCN9AQ15858 1988 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 EIF3HO15372 352 aaKnown RBP eCLIP18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 HEXIM1O94992 359 aaKnown RBP18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 CYP11B2P19099 503 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 CACNB1Q02641 598 aaPredicted RBP18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 SKIDA1Q1XH10 827 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 FAM133AQ8N9E0 248 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 TEKT1Q969V4 418 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 ZIM3Q96PE6 472 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 GANQ9H2C0 597 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 EPB41L5Q9HCM4 733 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 KCNQ5Q9NR82 932 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 NFU1Q9UMS0 254 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 MYH7BA7E2Y1 1941 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 SIPA1L1O43166 1804 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 GRIN2DO15399 1336 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 POTEB3A0JP26 581 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 POTECB2RU33 542 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 ANKRD65E5RJM6 399 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 GUCY2DQ02846 1103 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 NFIAQ12857 509 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 EDRF1Q3B7T1 1238 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 POTEBQ6S5H4 581 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 PPP4R3CPQ6ZMV5 832 aa18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 IQCKQ8N0W5 287 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms