RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ACTN1P12814 892 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 SELPP16109 830 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 ANKRD1Q15327 319 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 RASGRP4Q8TDF6 673 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 GLG1Q92896 1179 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 RNPEPQ9H4A4 650 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 AGO4Q9HCK5 861 aaKnown RBP23.27■■□□□ 1.32
SS18-224ENST00000584083 SLC9A2Q9UBY0 812 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 TPCN1Q9ULQ1 816 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 TET1Q8NFU7 2136 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 GNAT1P11488 350 aa23.26■■□□□ 1.31
SS18-224ENST00000584083 AK2P54819 239 aa23.26■■□□□ 1.31
SS18-224ENST00000584083 NIPA1Q7RTP0 329 aa23.26■■□□□ 1.31
SS18-224ENST00000584083 PLA2G4DQ86XP0 818 aa23.26■■□□□ 1.31
SS18-224ENST00000584083 SETD4Q9NVD3 440 aa23.26■■□□□ 1.31
SS18-224ENST00000584083 SLC4A7Q9Y6M7 1214 aa23.26■■□□□ 1.31
SS18-224ENST00000584083 NFASCO94856 1347 aa23.26■■□□□ 1.31
SS18-224ENST00000584083 CDKL5O76039 1030 aa23.25■■□□□ 1.31
SS18-224ENST00000584083 CYP3A4P08684 503 aa23.25■■□□□ 1.31
SS18-224ENST00000584083 DNAJB2P25686 324 aa23.25■■□□□ 1.31
SS18-224ENST00000584083 RBL2Q08999 1139 aa23.25■■□□□ 1.31
SS18-224ENST00000584083 SCRN1Q12765 414 aa23.25■■□□□ 1.31
SS18-224ENST00000584083 SERINC5Q86VE9 423 aa23.25■■□□□ 1.31
SS18-224ENST00000584083 WNT8BQ93098 351 aa23.25■■□□□ 1.31
SS18-224ENST00000584083 SEMA6BQ9H3T3 888 aa23.25■■□□□ 1.31
SS18-224ENST00000584083 SMARCAD1Q9H4L7 1026 aa23.25■■□□□ 1.31
SS18-224ENST00000584083 GBF1Q92538 1859 aa23.25■■□□□ 1.31
SS18-224ENST00000584083 FAM86B1E9PN63 330 aa23.24■■□□□ 1.31
SS18-224ENST00000584083 TREHO43280 583 aa23.24■■□□□ 1.31
SS18-224ENST00000584083 PFKFB2O60825 505 aa23.24■■□□□ 1.31
SS18-224ENST00000584083 PARNO95453 639 aaKnown RBP23.24■■□□□ 1.31
SS18-224ENST00000584083 FAM86B2P0C5J1 330 aa23.24■■□□□ 1.31
SS18-224ENST00000584083 MARK3P27448 753 aa23.24■■□□□ 1.31
SS18-224ENST00000584083 THPOP40225 353 aa23.24■■□□□ 1.31
SS18-224ENST00000584083 ITGB3BPQ13352 177 aaPredicted RBP23.24■■□□□ 1.31
SS18-224ENST00000584083 TRIM71Q2Q1W2 868 aaKnown RBP23.24■■□□□ 1.31
SS18-224ENST00000584083 CRYGNQ8WXF5 182 aa23.24■■□□□ 1.31
SS18-224ENST00000584083 ERAP1Q9NZ08 941 aa23.24■■□□□ 1.31
SS18-224ENST00000584083 HOXC8P31273 242 aa23.23■■□□□ 1.31
SS18-224ENST00000584083 PBX2P40425 430 aa23.23■■□□□ 1.31
SS18-224ENST00000584083 NEK4P51957 841 aa23.23■■□□□ 1.31
SS18-224ENST00000584083 ACTR2P61160 394 aa23.23■■□□□ 1.31
SS18-224ENST00000584083 ZNF618Q5T7W0 954 aa23.23■■□□□ 1.31
SS18-224ENST00000584083 TIFAQ96CG3 184 aa23.23■■□□□ 1.31
SS18-224ENST00000584083 IL17RAQ96F46 866 aa23.23■■□□□ 1.31
SS18-224ENST00000584083 AIFM3Q96NN9 605 aa23.23■■□□□ 1.31
SS18-224ENST00000584083 UIMC1Q96RL1 719 aa23.23■■□□□ 1.31
SS18-224ENST00000584083 AZI2Q9H6S1 392 aa23.23■■□□□ 1.31
SS18-224ENST00000584083 PCDHA4Q9UN74 947 aa23.23■■□□□ 1.31
SS18-224ENST00000584083 IGLV3-22A0A075B6J6 115 aa23.22■■□□□ 1.31
SS18-224ENST00000584083 DDX39AO00148 427 aaKnown RBP23.22■■□□□ 1.31
SS18-224ENST00000584083 LMBR1Q8WVP7 490 aa23.22■■□□□ 1.31
SS18-224ENST00000584083 PBX4Q9BYU1 374 aa23.22■■□□□ 1.31
SS18-224ENST00000584083 TTYH1Q9H313 450 aaPredicted RBP23.22■■□□□ 1.31
SS18-224ENST00000584083 MSRAQ9UJ68 235 aa23.22■■□□□ 1.31
SS18-224ENST00000584083 TMEM265A0A087WTH1 108 aa23.21■■□□□ 1.31
SS18-224ENST00000584083 IPO5O00410 1097 aaKnown RBP23.21■■□□□ 1.31
SS18-224ENST00000584083 LGR5O75473 907 aa23.21■■□□□ 1.31
SS18-224ENST00000584083 SETQ01105 290 aaPredicted RBP23.21■■□□□ 1.31
SS18-224ENST00000584083 PPFIA1Q13136 1202 aa23.21■■□□□ 1.31
SS18-224ENST00000584083 RAB30Q15771 203 aa23.21■■□□□ 1.31
SS18-224ENST00000584083 PRR16Q569H4 304 aa23.21■■□□□ 1.31
SS18-224ENST00000584083 GUCD1Q96NT3 240 aa23.21■■□□□ 1.31
SS18-224ENST00000584083 ZNF577Q9BSK1 485 aa23.21■■□□□ 1.31
SS18-224ENST00000584083 STXBP5LQ9Y2K9 1186 aa23.21■■□□□ 1.31
SS18-224ENST00000584083 EMSYQ7Z589 1322 aa23.21■■□□□ 1.31
SS18-224ENST00000584083 NRCAMQ92823 1304 aa23.21■■□□□ 1.31
SS18-224ENST00000584083 RSPH10B2B2RC85 870 aa23.2■■□□□ 1.3
SS18-224ENST00000584083 NBNO60934 754 aa23.2■■□□□ 1.3
SS18-224ENST00000584083 RSPH10BP0C881 870 aa23.2■■□□□ 1.3
SS18-224ENST00000584083 ATP2A2P16615 1042 aaKnown RBP23.2■■□□□ 1.3
SS18-224ENST00000584083 GPNMBQ14956 572 aa23.2■■□□□ 1.3
SS18-224ENST00000584083 BLIDQ8IZY5 108 aa23.2■■□□□ 1.3
SS18-224ENST00000584083 NECAB1Q8N987 351 aa23.2■■□□□ 1.3
SS18-224ENST00000584083 PCYT2Q99447 389 aa23.2■■□□□ 1.3
SS18-224ENST00000584083 DTNBO60941 627 aa23.19■■□□□ 1.3
SS18-224ENST00000584083 CIITAP33076 1130 aa23.19■■□□□ 1.3
SS18-224ENST00000584083 RABGGTBP53611 331 aa23.19■■□□□ 1.3
SS18-224ENST00000584083 GRIK4Q16099 956 aa23.19■■□□□ 1.3
SS18-224ENST00000584083 GALNT17Q6IS24 598 aa23.19■■□□□ 1.3
SS18-224ENST00000584083 TRAF7Q6Q0C0 670 aa23.19■■□□□ 1.3
SS18-224ENST00000584083 FAM177A1Q8N128 213 aaPredicted RBP23.19■■□□□ 1.3
SS18-224ENST00000584083 C22orf23Q9BZE7 217 aa23.19■■□□□ 1.3
SS18-224ENST00000584083 ZNF576Q9H609 170 aa23.19■■□□□ 1.3
SS18-224ENST00000584083 TCEAL9Q9UHQ7 104 aa23.19■■□□□ 1.3
SS18-224ENST00000584083 MYO9BQ13459 2157 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 MYH9P35579 1960 aaKnown RBP23.18■■□□□ 1.3
SS18-224ENST00000584083 STK36Q9NRP7 1315 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 BACH1O14867 736 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 BAIAP3O94812 1187 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 CCNE2O96020 404 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 CXCL10P02778 98 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 CTSHP09668 335 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 XBP1P17861 261 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 STAT5BP51692 787 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 USP11P51784 963 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 IGBP1P78318 339 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 ADAM17P78536 824 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 CNKSR3Q6P9H4 555 aa23.18■■□□□ 1.3
SS18-224ENST00000584083 TNPO1Q92973 898 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms