RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 CCT2P78371 535 aaKnown RBP11.29□□□□□ -0.6
SKA2-208ENST00000583927 ARHGAP4P98171 946 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 SSRP1Q08945 709 aaKnown RBP11.29□□□□□ -0.6
SKA2-208ENST00000583927 TRIM71Q2Q1W2 868 aaKnown RBP11.29□□□□□ -0.6
SKA2-208ENST00000583927 ZNF697Q5TEC3 545 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 GALNT17Q6IS24 598 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 SCLYQ96I15 445 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 ALG1Q9BT22 464 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 SLC26A6Q9BXS9 759 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 RNPEPQ9H4A4 650 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 NCOA5Q9HCD5 579 aaKnown RBP11.29□□□□□ -0.6
SKA2-208ENST00000583927 SLC9A2Q9UBY0 812 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 STK36Q9NRP7 1315 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 IGLV3-22A0A075B6J6 115 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 C17orf102A2RUQ5 167 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 CPLX1O14810 134 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 PFKFB2O60825 505 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 CDKL5O76039 1030 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 BAIAP3O94812 1187 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 ATG7O95352 703 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 RPLP2P05387 115 aaKnown RBP11.28□□□□□ -0.6
SKA2-208ENST00000583927 SMIM10L2AP0DMW4 78 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 SMIM10L2BP0DMW5 78 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 ACTN1P12814 892 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 TCF7P36402 384 aaPredicted RBP11.28□□□□□ -0.6
SKA2-208ENST00000583927 USP11P51784 963 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 SETQ01105 290 aaPredicted RBP11.28□□□□□ -0.6
SKA2-208ENST00000583927 HIC1Q14526 733 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 RPAINQ86UA6 219 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 DAGLBQ8NCG7 672 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 CYP2W1Q8TAV3 490 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 C22orf23Q9BZE7 217 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 SEMA6BQ9H3T3 888 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 SMARCAD1Q9H4L7 1026 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 AGO4Q9HCK5 861 aaKnown RBP11.28□□□□□ -0.6
SKA2-208ENST00000583927 JPH1Q9HDC5 661 aaPredicted RBP11.28□□□□□ -0.6
SKA2-208ENST00000583927 ERAP1Q9NZ08 941 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 STXBP5LQ9Y2K9 1186 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 NRCAMQ92823 1304 aa11.28□□□□□ -0.6
SKA2-208ENST00000583927 SPTBN5Q9NRC6 3674 aaKnown RBP11.27□□□□□ -0.6
SKA2-208ENST00000583927 IGKV6D-21A0A0A0MT36 114 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 FAM86B1E9PN63 330 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 M0R2N6 131 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 SORBS3O60504 671 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 FAM86B2P0C5J1 330 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 ARP10275 920 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 DNAJB2P25686 324 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 SLC26A2P50443 739 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 CHMP4BP1P59074 171 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 GPNMBQ14956 572 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 JAKMIP3Q5VZ66 844 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 TRAF7Q6Q0C0 670 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 Q7L0L9 218 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 LRRC8DQ7L1W4 858 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 OTOP2Q7RTS6 562 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 PLPPR4Q7Z2D5 763 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 PHOSPHO2Q8TCD6 241 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 PPP1R13LQ8WUF5 828 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 TNPO1Q92973 898 aaKnown RBP11.27□□□□□ -0.61
SKA2-208ENST00000583927 ATP6V0A1Q93050 837 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 PGBD1Q96JS3 809 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 SDF4Q9BRK5 362 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 TMEM260Q9NX78 707 aa11.27□□□□□ -0.61
SKA2-208ENST00000583927 CXXC1Q9P0U4 656 aaPredicted RBP11.27□□□□□ -0.61
SKA2-208ENST00000583927 TTC3P53804 2025 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 MBLAC1A4D2B0 266 aaPredicted RBP11.26□□□□□ -0.61
SKA2-208ENST00000583927 IPO5O00410 1097 aaKnown RBP11.26□□□□□ -0.61
SKA2-208ENST00000583927 DHX15O43143 795 aaKnown RBP11.26□□□□□ -0.61
SKA2-208ENST00000583927 EFCAB14O75071 495 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 ZNF76P36508 570 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 ZNF200P98182 395 aaPredicted RBP11.26□□□□□ -0.61
SKA2-208ENST00000583927 SCRN1Q12765 414 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 ITGB3BPQ13352 177 aaPredicted RBP11.26□□□□□ -0.61
SKA2-208ENST00000583927 NPY5RQ15761 445 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 RAB30Q15771 203 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 CNKSR3Q6P9H4 555 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 TRIM50Q86XT4 487 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 GUCD1Q96NT3 240 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 SLC9A7Q96T83 725 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 PBX4Q9BYU1 374 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 SLKQ9H2G2 1235 aaPredicted RBP11.26□□□□□ -0.61
SKA2-208ENST00000583927 TTYH1Q9H313 450 aaPredicted RBP11.26□□□□□ -0.61
SKA2-208ENST00000583927 TBC1D22BQ9NU19 505 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 VPS54Q9P1Q0 977 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 TPCN1Q9ULQ1 816 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 PCDHA4Q9UN74 947 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 TELO2Q9Y4R8 837 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 SLC4A7Q9Y6M7 1214 aa11.26□□□□□ -0.61
SKA2-208ENST00000583927 NLRC5Q86WI3 1866 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 VCANP13611 3396 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 CYP3A7-CYP3A51PA0A087WV96 503 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 RRN3P2A6NIE6 340 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 ADAMTS3O15072 1205 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 TREHO43280 583 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 EDIL3O43854 480 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 NBNO60934 754 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 CYP3A7P24462 503 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 AK2P54819 239 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 NLRP5P59047 1200 aa11.25□□□□□ -0.61
SKA2-208ENST00000583927 ACTR2P61160 394 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 176.2 ms