RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 RFC2P35250 354 aa18.94■□□□□ 0.62
SREBF1-219ENST00000580540 SCRN1Q12765 414 aa18.94■□□□□ 0.62
SREBF1-219ENST00000580540 AFAP1L1Q8TED9 768 aa18.94■□□□□ 0.62
SREBF1-219ENST00000580540 AGO4Q9HCK5 861 aaKnown RBP18.94■□□□□ 0.62
SREBF1-219ENST00000580540 SH3GLB2Q9NR46 395 aa18.94■□□□□ 0.62
SREBF1-219ENST00000580540 SETD4Q9NVD3 440 aa18.94■□□□□ 0.62
SREBF1-219ENST00000580540 MTMR10Q9NXD2 777 aa18.94■□□□□ 0.62
SREBF1-219ENST00000580540 SCN5AQ14524 2016 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 FAM86B1E9PN63 330 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 PFKFB2O60825 505 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 CDKL5O76039 1030 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 PFKMP08237 780 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 FAM86B2P0C5J1 330 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 CKBP12277 381 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 ACTN1P12814 892 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 THPOP40225 353 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 NEK4P51957 841 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 RASIP1Q5U651 963 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 LRRC8DQ7L1W4 858 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 WNT8BQ93098 351 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 VWCEQ96DN2 955 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 AIFM3Q96NN9 605 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 SLC4A7Q9Y6M7 1214 aa18.93■□□□□ 0.62
SREBF1-219ENST00000580540 TREHO43280 583 aa18.92■□□□□ 0.62
SREBF1-219ENST00000580540 CYP3A4P08684 503 aa18.92■□□□□ 0.62
SREBF1-219ENST00000580540 GNAT1P11488 350 aa18.92■□□□□ 0.62
SREBF1-219ENST00000580540 ITGB3BPQ13352 177 aaPredicted RBP18.92■□□□□ 0.62
SREBF1-219ENST00000580540 NECAB1Q8N987 351 aa18.92■□□□□ 0.62
SREBF1-219ENST00000580540 SMARCAD1Q9H4L7 1026 aa18.92■□□□□ 0.62
SREBF1-219ENST00000580540 AZI2Q9H6S1 392 aa18.92■□□□□ 0.62
SREBF1-219ENST00000580540 NFASCO94856 1347 aa18.92■□□□□ 0.62
SREBF1-219ENST00000580540 DNAJB2P25686 324 aa18.91■□□□□ 0.62
SREBF1-219ENST00000580540 PBX2P40425 430 aa18.91■□□□□ 0.62
SREBF1-219ENST00000580540 ACTR2P61160 394 aa18.91■□□□□ 0.62
SREBF1-219ENST00000580540 PRR16Q569H4 304 aa18.91■□□□□ 0.62
SREBF1-219ENST00000580540 ZNF618Q5T7W0 954 aa18.91■□□□□ 0.62
SREBF1-219ENST00000580540 NIPA1Q7RTP0 329 aa18.91■□□□□ 0.62
SREBF1-219ENST00000580540 SERINC5Q86VE9 423 aa18.91■□□□□ 0.62
SREBF1-219ENST00000580540 SEMA6BQ9H3T3 888 aa18.91■□□□□ 0.62
SREBF1-219ENST00000580540 ERAP1Q9NZ08 941 aa18.91■□□□□ 0.62
SREBF1-219ENST00000580540 PCDHA4Q9UN74 947 aa18.91■□□□□ 0.62
SREBF1-219ENST00000580540 LAMA2P24043 3122 aaKnown RBP18.91■□□□□ 0.62
SREBF1-219ENST00000580540 PPFIA1Q13136 1202 aa18.9■□□□□ 0.62
SREBF1-219ENST00000580540 TRIM71Q2Q1W2 868 aaKnown RBP18.9■□□□□ 0.62
SREBF1-219ENST00000580540 LMBR1Q8WVP7 490 aa18.9■□□□□ 0.62
SREBF1-219ENST00000580540 CRYGNQ8WXF5 182 aa18.9■□□□□ 0.62
SREBF1-219ENST00000580540 TIFAQ96CG3 184 aa18.9■□□□□ 0.62
SREBF1-219ENST00000580540 ZNF577Q9BSK1 485 aa18.9■□□□□ 0.62
SREBF1-219ENST00000580540 PBX4Q9BYU1 374 aa18.9■□□□□ 0.62
SREBF1-219ENST00000580540 MSRAQ9UJ68 235 aa18.9■□□□□ 0.62
SREBF1-219ENST00000580540 KCNJ14Q9UNX9 436 aa18.9■□□□□ 0.62
SREBF1-219ENST00000580540 IGLV3-22A0A075B6J6 115 aa18.89■□□□□ 0.61
SREBF1-219ENST00000580540 RBAK-RBAKDNI3L0D1 243 aa18.89■□□□□ 0.61
SREBF1-219ENST00000580540 IPO5O00410 1097 aaKnown RBP18.89■□□□□ 0.61
SREBF1-219ENST00000580540 CTSHP09668 335 aa18.89■□□□□ 0.61
SREBF1-219ENST00000580540 IGBP1P78318 339 aa18.89■□□□□ 0.61
SREBF1-219ENST00000580540 RBL2Q08999 1139 aa18.89■□□□□ 0.61
SREBF1-219ENST00000580540 BLIDQ8IZY5 108 aa18.89■□□□□ 0.61
SREBF1-219ENST00000580540 PCYT2Q99447 389 aa18.89■□□□□ 0.61
SREBF1-219ENST00000580540 TTYH1Q9H313 450 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-219ENST00000580540 KAT6AQ92794 2004 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 RSPH10B2B2RC85 870 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 BACH1O14867 736 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 NBNO60934 754 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 PARNO95453 639 aaKnown RBP18.88■□□□□ 0.61
SREBF1-219ENST00000580540 LARGE1O95461 756 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 RSPH10BP0C881 870 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 ATP2A2P16615 1042 aaKnown RBP18.88■□□□□ 0.61
SREBF1-219ENST00000580540 XBP1P17861 261 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 HOXC8P31273 242 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 STAT5BP51692 787 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 RABGGTBP53611 331 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 SETQ01105 290 aaPredicted RBP18.88■□□□□ 0.61
SREBF1-219ENST00000580540 GPNMBQ14956 572 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 GRIK4Q16099 956 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 ME3Q16798 604 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 C8orf34Q49A92 452 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 TBCKQ8TEA7 893 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 IL17RAQ96F46 866 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 GUCD1Q96NT3 240 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 ORC3Q9UBD5 711 aaPredicted RBP18.88■□□□□ 0.61
SREBF1-219ENST00000580540 TCEAL9Q9UHQ7 104 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 TRPC6Q9Y210 931 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 NRCAMQ92823 1304 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 TET1Q8NFU7 2136 aa18.88■□□□□ 0.61
SREBF1-219ENST00000580540 LGR5O75473 907 aa18.87■□□□□ 0.61
SREBF1-219ENST00000580540 CCNE2O96020 404 aa18.87■□□□□ 0.61
SREBF1-219ENST00000580540 RAB30Q15771 203 aa18.87■□□□□ 0.61
SREBF1-219ENST00000580540 EMSYQ7Z589 1322 aa18.87■□□□□ 0.61
SREBF1-219ENST00000580540 C22orf23Q9BZE7 217 aa18.87■□□□□ 0.61
SREBF1-219ENST00000580540 TANC1Q9C0D5 1861 aa18.87■□□□□ 0.61
SREBF1-219ENST00000580540 STK36Q9NRP7 1315 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 DHX15O43143 795 aaKnown RBP18.86■□□□□ 0.61
SREBF1-219ENST00000580540 CTDNEP1O95476 244 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 INSRRP14616 1297 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 CIITAP33076 1130 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 KCNJ6P48051 423 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 USP11P51784 963 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 FAM160B1Q5W0V3 765 aa18.86■□□□□ 0.61
SREBF1-219ENST00000580540 GALNT17Q6IS24 598 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms