RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 NCOA4Q13772 614 aa10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 GJC2Q5T442 439 aaPredicted RBP10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 MFSD14CQ5VZR4 134 aa10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 TAPT1Q6NXT6 567 aa10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 EEPD1Q7L9B9 569 aa10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 UBE2Q1Q7Z7E8 422 aa10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 FBXO16Q8IX29 292 aaPredicted RBP10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 MORC4Q8TE76 937 aa10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 DIS3LQ8TF46 1054 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 SGPL1O95470 568 aa10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 SMPD1P17405 629 aa10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 EIF2AK2P19525 551 aaKnown RBP10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 CNGA1P29973 690 aa10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 NNTQ13423 1086 aa10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 ACVR2BQ13705 512 aa10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 PFKFB3Q16875 520 aaPredicted RBP10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 PPP1R26Q5T8A7 1209 aaPredicted RBP10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 SLC26A6Q9BXS9 759 aa10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 TMPRSS4Q9NRS4 437 aa10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 GJB4Q9NTQ9 266 aa10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 SLC5A4Q9NY91 659 aa10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 SEC63Q9UGP8 760 aaKnown RBP10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 DDX20Q9UHI6 824 aaKnown RBP10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 ZHX1Q9UKY1 873 aaPredicted RBP10.9□□□□□ -0.66
NPLOC4-219ENST00000576713 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 MYADML2A6NDP7 307 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 SEPT4O43236 478 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 PRPF3O43395 683 aaKnown RBP10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 JAK2O60674 1132 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 ARIH2O95376 493 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 FDPSP14324 419 aaKnown RBP10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 ADCYAP1R1P41586 468 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 EML3Q32P44 896 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 CCDC144BQ3MJ40 725 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 OXLD1Q5BKU9 147 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 FCHSD1Q86WN1 690 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 MSL3Q8N5Y2 521 aaKnown RBP10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 GTF3C6Q969F1 213 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 PGBD1Q96JS3 809 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 RMDN3Q96TC7 470 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 PXMP2Q9NR77 195 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 TMEM260Q9NX78 707 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 BARHL2Q9NY43 387 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 PNMA2Q9UL42 364 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 OGDHLQ9ULD0 1010 aa10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 LAMA2P24043 3122 aaKnown RBP10.89□□□□□ -0.67
NPLOC4-219ENST00000576713 FRMPD4Q14CM0 1322 aa10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 GCOM1H8Y6P7 765 aaPredicted RBP10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 CTAGE5O15320 804 aa10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 POLR2MP0CAP2 368 aa10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 SCG2P13521 617 aa10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 MRPS9P82933 396 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 PPP2R5BQ15173 497 aa10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 NPY5RQ15761 445 aa10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 MCF2L2Q86YR7 1114 aa10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 DNERQ8NFT8 737 aa10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 PBXIP1Q96AQ6 731 aa10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 PDCD2LQ9BRP1 358 aa10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 RNF26Q9BY78 433 aaPredicted RBP10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 ABHD16BQ9H3Z7 469 aa10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 BCAS3Q9H6U6 928 aa10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 VPS54Q9P1Q0 977 aa10.88□□□□□ -0.67
NPLOC4-219ENST00000576713 SYNRGQ9UMZ2 1314 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 CCDC196A0A1B0GTZ2 297 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 ASB14A6NK59 587 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 EDIL3O43854 480 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 EIF5BO60841 1220 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 ADAMTS4O75173 837 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 PGK1P00558 417 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 TFRCP02786 760 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 NAPAP54920 295 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 USP4Q13107 963 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 PGM5Q15124 567 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 ANKRD1Q15327 319 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 NSUN7Q8NE18 718 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 RASGRP4Q8TDF6 673 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 NSUN6Q8TEA1 469 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 COPS5Q92905 334 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 SLKQ9H2G2 1235 aaPredicted RBP10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 VRTNQ9H8Y1 702 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 PSTPIP2Q9H939 334 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 ADD3Q9UEY8 706 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 CNPY2Q9Y2B0 182 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 TELO2Q9Y4R8 837 aa10.87□□□□□ -0.67
NPLOC4-219ENST00000576713 RBM47A0AV96 593 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 SMCO2A6NFE2 343 aa10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 COL6A1P12109 1028 aa10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 AKR1A1P14550 325 aa10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 SCTRP47872 440 aa10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 RABEP1Q15276 862 aa10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 ARHGEF16Q5VV41 709 aa10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 VSIG10LQ86VR7 867 aa10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 CCDC83Q8IWF9 413 aa10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 PAWRQ96IZ0 340 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 KLF16Q9BXK1 252 aaPredicted RBP10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 RIC8AQ9NPQ8 531 aa10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 NRBP1Q9UHY1 535 aa10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 LIMCH1Q9UPQ0 1083 aa10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 GNEQ9Y223 722 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-219ENST00000576713 PDE4DIPQ5VU43 2346 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms