RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 KCNA2P16389 499 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 ITGB5P18084 799 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 MARK3P27448 753 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 PSMA5P28066 241 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 CDC27P30260 824 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 HSPA4P34932 840 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 RCAN1P53805 252 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 HIC1Q14526 733 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 CCDC85BQ15834 202 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 TRIM71Q2Q1W2 868 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 SERINC5Q86VE9 423 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 HERC6Q8IVU3 1022 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 GLG1Q92896 1179 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 ANO3Q9BYT9 981 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 GLT8D2Q9H1C3 349 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 RNPEPQ9H4A4 650 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 CERS4Q9HA82 394 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 RIC8AQ9NPQ8 531 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 SETD4Q9NVD3 440 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 SNX14Q9Y5W7 946 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 EVPLQ92817 2033 aa11.04□□□□□ -0.64
NPLOC4-216ENST00000574344 CUL9Q8IWT3 2517 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 STXBP3O00186 592 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 EFCAB14O75071 495 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 ATP9AO75110 1047 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 LGR5O75473 907 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 FOSP01100 380 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 CXCL10P02778 98 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 ADD1P35611 737 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 ZNF76P36508 570 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 DEFB103AP81534 67 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 AKAP17AQ02040 695 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 IKBKEQ14164 716 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 TYW1BQ6NUM6 668 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 FAM117BQ6P1L5 589 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 TMCO2Q7Z6W1 182 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 USP38Q8NB14 1042 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 SEPT1Q8WYJ6 367 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 SDF4Q9BRK5 362 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 JPH1Q9HDC5 661 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 JADE2Q9NQC1 790 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 TMEM260Q9NX78 707 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 BARHL2Q9NY43 387 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 TELO2Q9Y4R8 837 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 UBIAD1Q9Y5Z9 338 aa11.03□□□□□ -0.64
NPLOC4-216ENST00000574344 RALGAPA2Q2PPJ7 1873 aa11.02□□□□□ -0.64
NPLOC4-216ENST00000574344 ABHD14A-ACY1A0A1B0GW23 586 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 MAFGO15525 162 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 GTPBP6O43824 516 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 SCG2P13521 617 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 RPS6KB1P23443 525 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 FUT2Q10981 343 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 PPFIA1Q13136 1202 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 AP3B2Q13367 1082 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 ADGRE1Q14246 886 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 GPNMBQ14956 572 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 JAKMIP3Q5VZ66 844 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 HSCBQ8IWL3 235 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 MYOCDQ8IZQ8 938 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 CCDC12Q8WUD4 166 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 LMBR1Q8WVP7 490 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 ARNTL2Q8WYA1 636 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 MXRA8Q9BRK3 442 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 COL25A1Q9BXS0 654 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 AZI2Q9H6S1 392 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 ERAP1Q9NZ08 941 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 SLC9A2Q9UBY0 812 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 NRCAMQ92823 1304 aa11.02□□□□□ -0.65
NPLOC4-216ENST00000574344 PRRC2BQ5JSZ5 2229 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 TCF20Q9UGU0 1960 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 GSTTP1A0A1W2PQM5 241 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 DDX39AO00148 427 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 RFXAPO00287 272 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 PPFIA3O75145 1194 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 CAND2O75155 1236 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 AMHP03971 560 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 HOXC8P31273 242 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 IGBP1P78318 339 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 MBTPS1Q14703 1052 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 SKIV2LQ15477 1246 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 GRIK4Q16099 956 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 PFKFB3Q16875 520 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 TCTN1Q2MV58 587 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 CEP55Q53EZ4 464 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 TRAF7Q6Q0C0 670 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 RSPH3Q86UC2 560 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 TEX2Q8IWB9 1127 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 DBF4BQ8NFT6 615 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 KCNB2Q92953 911 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 PHKBQ93100 1093 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 TSPYL2Q9H2G4 693 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 SMARCAD1Q9H4L7 1026 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 C6orf50Q9HD87 102 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 KCNH7Q9NS40 1196 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 THEGQ9P2T0 379 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 TCEAL9Q9UHQ7 104 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 TUBE1Q9UJT0 475 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 TRPC6Q9Y210 931 aa11.01□□□□□ -0.65
NPLOC4-216ENST00000574344 LCHNA4D1U4 455 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms