RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 NKAPLQ5M9Q1 402 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 GTF2IRD2BQ6EKJ0 949 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 INTS5Q6P9B9 1019 aaKnown RBP7.18□□□□□ -1.26
SF3B3-214ENST00000572365 GTF2IRD2Q86UP8 949 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 ZNF655Q8N720 491 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-214ENST00000572365 SHKBP1Q8TBC3 707 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 CCDC140Q96MF4 163 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 OSBPL1AQ9BXW6 950 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 SLKQ9H2G2 1235 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-214ENST00000572365 NKX2-4Q9H2Z4 354 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 TMX1Q9H3N1 280 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 ZNF277Q9NRM2 450 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-214ENST00000572365 HACL1Q9UJ83 578 aa7.18□□□□□ -1.26
SF3B3-214ENST00000572365 MRPS23Q9Y3D9 190 aaKnown RBP7.18□□□□□ -1.26
SF3B3-214ENST00000572365 ANKRD31Q8N7Z5 1873 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 TRBV23-1A0A0A0MS06 115 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 FAM155AB1AL88 458 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-214ENST00000572365 PPP1R12AO14974 1030 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-214ENST00000572365 PROCP04070 461 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 GSNP06396 782 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 L1CAMP32004 1257 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 GYS2P54840 703 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 DOC2BQ14184 412 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 HABP4Q5JVS0 413 aaKnown RBP7.17□□□□□ -1.26
SF3B3-214ENST00000572365 NSMFQ6X4W1 530 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 SPACA3Q8IXA5 215 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 FAM181AQ8N9Y4 354 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 BTN2A2Q8WVV5 523 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 ZDHHC15Q96MV8 337 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 TAOK3Q9H2K8 898 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 NCOA5Q9HCD5 579 aaKnown RBP7.17□□□□□ -1.26
SF3B3-214ENST00000572365 CYP26B1Q9NR63 512 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 GPATCH2Q9NW75 528 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 TERF2IPQ9NYB0 399 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 MINPP1Q9UNW1 487 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 PRKAB1Q9Y478 270 aa7.17□□□□□ -1.26
SF3B3-214ENST00000572365 EDC4Q6P2E9 1401 aaKnown RBP7.17□□□□□ -1.26
SF3B3-214ENST00000572365 LTBP1Q14766 1721 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 DLEC1Q9Y238 1755 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 DNAJC25-GNG10A0A024R161 153 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 H0Y8X5 98 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 PRODHO43272 600 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 SCG5P05408 212 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 CEACAM5P06731 702 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 HOXC12P31275 282 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 ECE1P42892 770 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 CLCN7P51798 805 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 AMPD2Q01433 879 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 RSPO4Q2I0M5 234 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-214ENST00000572365 CLEC16AQ2KHT3 1053 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 TAF7LQ5H9L4 462 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 DNAJC10Q8IXB1 793 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 IFNL2Q8IZJ0 200 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 SYNE4Q8N205 404 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 IPO9Q96P70 1041 aaKnown RBP7.16□□□□□ -1.26
SF3B3-214ENST00000572365 SIN3AQ96ST3 1273 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 IER2Q9BTL4 223 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 TRIT1Q9H3H1 467 aaKnown RBP7.16□□□□□ -1.26
SF3B3-214ENST00000572365 PLAGL2Q9UPG8 496 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 PLAAQ9Y263 795 aa7.16□□□□□ -1.26
SF3B3-214ENST00000572365 FYB1O15117 783 aa7.15□□□□□ -1.26
SF3B3-214ENST00000572365 DLX3O60479 287 aa7.15□□□□□ -1.26
SF3B3-214ENST00000572365 RFPL3O75679 317 aa7.15□□□□□ -1.26
SF3B3-214ENST00000572365 ITIH2P19823 946 aa7.15□□□□□ -1.26
SF3B3-214ENST00000572365 EPS15P42566 896 aa7.15□□□□□ -1.26
SF3B3-214ENST00000572365 GFRA1P56159 465 aa7.15□□□□□ -1.26
SF3B3-214ENST00000572365 SUMO1P63165 101 aaKnown RBP7.15□□□□□ -1.26
SF3B3-214ENST00000572365 POU4F1Q01851 419 aa7.15□□□□□ -1.26
SF3B3-214ENST00000572365 MAP4K2Q12851 820 aa7.15□□□□□ -1.26
SF3B3-214ENST00000572365 GAB4Q2WGN9 574 aa7.15□□□□□ -1.26
SF3B3-214ENST00000572365 RNF187Q5TA31 235 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-214ENST00000572365 CWF19L1Q69YN2 538 aaKnown RBP7.15□□□□□ -1.26
SF3B3-214ENST00000572365 THAP5Q7Z6K1 395 aa7.15□□□□□ -1.26
SF3B3-214ENST00000572365 TSPYL5Q86VY4 417 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-214ENST00000572365 ZDHHC13Q8IUH4 622 aa7.15□□□□□ -1.26
SF3B3-214ENST00000572365 SPOCK3Q9BQ16 436 aa7.15□□□□□ -1.26
SF3B3-214ENST00000572365 KDRP35968 1356 aa7.15□□□□□ -1.26
SF3B3-214ENST00000572365 MEIS1O00470 390 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 PLD2O14939 933 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 ROCK2O75116 1388 aaKnown RBP7.14□□□□□ -1.27
SF3B3-214ENST00000572365 VAMP4O75379 141 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 CELF2O95319 508 aaKnown RBP7.14□□□□□ -1.27
SF3B3-214ENST00000572365 COL11A2P13942 1736 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-214ENST00000572365 BMP8BP34820 402 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 CYP4F3Q08477 520 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 SLC39A6Q13433 755 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 SF1Q15637 639 aaKnown RBP7.14□□□□□ -1.27
SF3B3-214ENST00000572365 TBC1D9BQ66K14 1250 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 CRTC3Q6UUV7 619 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 SMG6Q86US8 1419 aaKnown RBP7.14□□□□□ -1.27
SF3B3-214ENST00000572365 KCTD13Q8WZ19 329 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 TCTN2Q96GX1 697 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 C1orf159Q96HA4 380 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 MRPL4Q9BYD3 311 aaKnown RBP7.14□□□□□ -1.27
SF3B3-214ENST00000572365 LRRC4CQ9HCJ2 640 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 AKAP11Q9UKA4 1901 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 GPR55Q9Y2T6 319 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-214ENST00000572365 SNX11Q9Y5W9 270 aa7.14□□□□□ -1.27
SF3B3-214ENST00000572365 TRIOBPQ9H2D6 2365 aa7.13□□□□□ -1.27
SF3B3-214ENST00000572365 PRR19A6NJB7 356 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms