RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 OSBPL7Q9BZF2 842 aa14.93□□□□□ -0.02
SF3B3-202ENST00000562722 PSTPIP2Q9H939 334 aa14.93□□□□□ -0.02
SF3B3-202ENST00000562722 NRCAMQ92823 1304 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 SIP14410 1827 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.92□□□□□ -0.02
SF3B3-202ENST00000562722 SPDYE3A6NKU9 549 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 MEIS2O14770 477 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 MARK3P27448 753 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 SMARCA1P28370 1054 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 SSTR3P32745 418 aaPredicted RBP14.92□□□□□ -0.02
SF3B3-202ENST00000562722 MCM5P33992 734 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 PPFIA1Q13136 1202 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 TIGD5Q53EQ6 642 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 TMEM31Q5JXX7 168 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 RSPH3Q86UC2 560 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 RAB11FIP4Q86YS3 637 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 TMEM192Q8IY95 271 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 TMTC2Q8N394 836 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 GLG1Q92896 1179 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 GPRASP2Q96D09 838 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 HCN4Q9Y3Q4 1203 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 NCOR1O75376 2440 aa14.92□□□□□ -0.02
SF3B3-202ENST00000562722 BDP1A6H8Y1 2624 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 hCG_1642624A0A1W2PR95 340 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 SH2B2O14492 632 aaPredicted RBP14.91□□□□□ -0.02
SF3B3-202ENST00000562722 CALM1P0DP23 149 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 CALM2P0DP24 149 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 CALM3P0DP25 149 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 GHRP10912 638 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 PLA2G5P39877 138 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 UBE2SQ16763 222 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 LEXMQ3ZCV2 418 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 PTCRAQ6ISU1 281 aaPredicted RBP14.91□□□□□ -0.02
SF3B3-202ENST00000562722 TAF2Q6P1X5 1199 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 RUFY4Q6ZNE9 571 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 CCDC82Q8N4S0 544 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 FIBCD1Q8N539 461 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 SRBD1Q8N5C6 995 aaKnown RBP14.91□□□□□ -0.02
SF3B3-202ENST00000562722 BANK1Q8NDB2 785 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 IL17RAQ96F46 866 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 TMEM87BQ96K49 555 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 LRFN3Q9BTN0 628 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 ERAP1Q9NZ08 941 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 SLC12A7Q9Y666 1083 aa14.91□□□□□ -0.02
SF3B3-202ENST00000562722 MICAL3Q7RTP6 2002 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.9□□□□□ -0.02
SF3B3-202ENST00000562722 FAM86C2PA6NEL3 165 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 H3BNC9 293 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 H3BQ06 376 aaPredicted RBP14.9□□□□□ -0.02
SF3B3-202ENST00000562722 ATP9AO75110 1047 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 CHRNA1P02708 482 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 CTNNB1P35222 781 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 IGBP1P78318 339 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 ADAM17P78536 824 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 MTMR1Q13613 665 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 GRIK4Q16099 956 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 FAM26DQ5JW98 314 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 HEATR3Q7Z4Q2 680 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.9□□□□□ -0.02
SF3B3-202ENST00000562722 SEPT1Q8WYJ6 367 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 MTA3Q9BTC8 594 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 EHMT1Q9H9B1 1298 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 TUBE1Q9UJT0 475 aa14.9□□□□□ -0.02
SF3B3-202ENST00000562722 DOCK5Q9H7D0 1870 aa14.89□□□□□ -0.03
SF3B3-202ENST00000562722 IL9P15248 144 aa14.89□□□□□ -0.03
SF3B3-202ENST00000562722 KCNA2P16389 499 aa14.89□□□□□ -0.03
SF3B3-202ENST00000562722 ITGB5P18084 799 aa14.89□□□□□ -0.03
SF3B3-202ENST00000562722 TCEAL5Q5H9L2 206 aa14.89□□□□□ -0.03
SF3B3-202ENST00000562722 MICU3Q86XE3 530 aa14.89□□□□□ -0.03
SF3B3-202ENST00000562722 GJD3Q8N144 294 aa14.89□□□□□ -0.03
SF3B3-202ENST00000562722 KHSRPQ92945 711 aaKnown RBP eCLIP14.89□□□□□ -0.034e-7■□□□□ 9.1
SF3B3-202ENST00000562722 LRRC2Q9BYS8 371 aa14.89□□□□□ -0.03
SF3B3-202ENST00000562722 SMARCAD1Q9H4L7 1026 aa14.89□□□□□ -0.03
SF3B3-202ENST00000562722 GSTTP1A0A1W2PQM5 241 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 SLC27A2O14975 620 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 CSPG5O95196 566 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 LIFRP42702 1097 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 LPIN1Q14693 890 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 PUS10Q3MIT2 529 aaKnown RBP14.88□□□□□ -0.03
SF3B3-202ENST00000562722 SYNE3Q6ZMZ3 975 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 FAM178BQ8IXR5 827 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 DNAJB3Q8WWF6 145 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 FAM49AQ9H0Q0 323 aaPredicted RBP14.88□□□□□ -0.03
SF3B3-202ENST00000562722 NSUN3Q9H649 340 aaKnown RBP14.88□□□□□ -0.03
SF3B3-202ENST00000562722 AZI2Q9H6S1 392 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 JPH1Q9HDC5 661 aaPredicted RBP14.88□□□□□ -0.03
SF3B3-202ENST00000562722 CD320Q9NPF0 282 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 PCDHA6Q9UN73 950 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 TRPC6Q9Y210 931 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 PCDHA8Q9Y5H6 950 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 CDY2AQ9Y6F7 541 aa14.88□□□□□ -0.03
SF3B3-202ENST00000562722 M0QZ92 97 aa14.87□□□□□ -0.03
SF3B3-202ENST00000562722 BTG3Q14201 252 aaPredicted RBP14.87□□□□□ -0.03
SF3B3-202ENST00000562722 CREB3L3Q68CJ9 461 aa14.87□□□□□ -0.03
SF3B3-202ENST00000562722 TMTC3Q6ZXV5 915 aa14.87□□□□□ -0.03
SF3B3-202ENST00000562722 RPAINQ86UA6 219 aa14.87□□□□□ -0.03
SF3B3-202ENST00000562722 PABPC5Q96DU9 382 aaKnown RBP14.87□□□□□ -0.03
SF3B3-202ENST00000562722 C11orf84Q9BUA3 381 aaPredicted RBP14.87□□□□□ -0.03
SF3B3-202ENST00000562722 LSG1Q9H089 658 aaKnown RBP14.87□□□□□ -0.03
SF3B3-202ENST00000562722 ANO2Q9NQ90 1003 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms