RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 CCT8L1PA6NM43 557 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 ORC4O43929 436 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 GNAT1P11488 350 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 TCP1P17987 556 aaKnown RBP15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 GTF2IP78347 998 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 SF3A3Q12874 501 aaKnown RBP eCLIP15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 SLC27A3Q5K4L6 730 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 RRAGBQ5VZM2 374 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 ARMC9Q7Z3E5 817 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 TRIM74Q86UV6 250 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 TRIM73Q86UV7 250 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 MFN1Q8IWA4 741 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 ZNF579Q8NAF0 562 aaKnown RBP15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 OR2W6PQ8NHA6 318 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 GSDMAQ96QA5 445 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 CPVLQ9H3G5 476 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 NDST4Q9H3R1 872 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 CAPN11Q9UMQ6 739 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 HYOU1Q9Y4L1 999 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 A6NHS1 94 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 TMTC3Q6ZXV5 915 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 MB21D1Q8N884 522 aa15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 ZNF513Q8N8E2 541 aaPredicted RBP15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 FOXP1Q9H334 677 aaPredicted RBP15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 TAF1DQ9H5J8 278 aaPredicted RBP15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 SRPRBQ9Y5M8 271 aaKnown RBP15.38■□□□□ 0.05
GTF3C1-203ENST00000562609 LIN7AO14910 233 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 NCK2O43639 380 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 MOCS3O95396 460 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 BAG3O95817 575 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 PRLRP16471 622 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 ATP4AP20648 1035 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 TRADDQ15628 312 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 EZH1Q92800 747 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 EPSTI1Q96J88 318 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 RTFDC1Q9BY42 306 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 ZNHIT6Q9NWK9 470 aaKnown RBP15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 ZFATQ9P243 1243 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 SMIM24O75264 130 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 GOLGA8HP0CJ92 632 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 FERP16591 822 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 ABL2P42684 1182 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 CTCFP49711 727 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 SBK1Q52WX2 424 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 KRT26Q7Z3Y9 468 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 COL23A1Q86Y22 540 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 GPKOWQ92917 476 aaPredicted RBP eCLIP15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 MS4A14Q96JA4 679 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 AGPAT5Q9NUQ2 364 aa15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 CNOT8Q9UFF9 292 aaKnown RBP15.37■□□□□ 0.05
GTF3C1-203ENST00000562609 PRPF3O43395 683 aaKnown RBP15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 APBA3O96018 575 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 TSPY3P0CV98 308 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 TSPY8P0CW00 308 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 ROR2Q01974 943 aaKnown RBP15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 MEA1Q16626 185 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 DOK7Q18PE1 504 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 RILPL1Q5EBL4 403 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 TMX4Q9H1E5 349 aaPredicted RBP15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 CNTNAP5Q8WYK1 1306 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 SPDYE3A6NKU9 549 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 ATP2B4P23634 1241 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 PAK1Q13153 545 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 ZNF174Q15697 407 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 PNMA1Q8ND90 353 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 CASKIN2Q8WXE0 1202 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 CNKSR1Q969H4 720 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 PHF20Q9BVI0 1012 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 OSBPL1AQ9BXW6 950 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 TSGA10Q9BZW7 698 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 RWDD2AQ9UIY3 292 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 G3BP2Q9UN86 482 aaKnown RBP15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 MAPK8IP1Q9UQF2 711 aa15.36■□□□□ 0.05
GTF3C1-203ENST00000562609 BBOX1O75936 387 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 DRD4P21917 467 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 PPP2R2AP63151 447 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 PICALMQ13492 652 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 SH3RF1Q7Z6J0 888 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 CCDC197Q8NCU1 140 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 B4GALNT2Q8NHY0 566 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 NELFBQ8WX92 580 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 ALS2CR12Q96Q35 445 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 BLZF1Q9H2G9 400 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 SLC12A4Q9UP95 1085 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 B4DLN1 442 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 ZNF263O14978 683 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 XBP1P17861 261 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 KRT2P35908 639 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 RCAN1P53805 252 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 SPA17Q15506 151 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 FAM133BQ5BKY9 247 aaKnown RBP15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 CCDC170Q8IYT3 715 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 ZNF444Q8N0Y2 327 aaPredicted RBP15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 WHAMMQ8TF30 809 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 LMCD1Q9NZU5 365 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 USO1O60763 962 aaKnown RBP15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 DDAH1O94760 285 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 CLSTN1O94985 981 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms