RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 PPP1R14CQ8TAE6 165 aa2.4□□□□□ -2.03
HIF1A-212ENST00000557538 E2F7Q96AV8 911 aa2.4□□□□□ -2.03
HIF1A-212ENST00000557538 KIRREL1Q96J84 757 aa2.4□□□□□ -2.03
HIF1A-212ENST00000557538 KRTAP9-2Q9BYQ4 174 aa2.4□□□□□ -2.03
HIF1A-212ENST00000557538 ZDHHC5Q9C0B5 715 aa2.4□□□□□ -2.03
HIF1A-212ENST00000557538 RNF32Q9H0A6 362 aa2.4□□□□□ -2.03
HIF1A-212ENST00000557538 PCMTD2Q9NV79 361 aa2.4□□□□□ -2.03
HIF1A-212ENST00000557538 SLC5A4Q9NY91 659 aa2.4□□□□□ -2.03
HIF1A-212ENST00000557538 PPARGC1AQ9UBK2 798 aaKnown RBP2.4□□□□□ -2.03
HIF1A-212ENST00000557538 TELO2Q9Y4R8 837 aa2.4□□□□□ -2.03
HIF1A-212ENST00000557538 ATP23Q9Y6H3 246 aa2.4□□□□□ -2.03
HIF1A-212ENST00000557538 GOLGA6L22H0YM25 854 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 NEMP1O14524 444 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 NKRFO15226 690 aaKnown RBP eCLIP2.39□□□□□ -2.03
HIF1A-212ENST00000557538 BUB1BO60566 1050 aaPredicted RBP2.39□□□□□ -2.03
HIF1A-212ENST00000557538 LRG1P02750 347 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 FUCA1P04066 466 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 CD96P40200 585 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 CACNB2Q08289 660 aaPredicted RBP2.39□□□□□ -2.03
HIF1A-212ENST00000557538 RPTNQ6XPR3 784 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 ARHGAP36Q6ZRI8 547 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 CABP7Q86V35 215 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 C2orf69Q8N8R5 385 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 NUP43Q8NFH3 380 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 FOXRED1Q96CU9 486 aaPredicted RBP2.39□□□□□ -2.03
HIF1A-212ENST00000557538 FAM126AQ9BYI3 521 aaPredicted RBP2.39□□□□□ -2.03
HIF1A-212ENST00000557538 ASPSCR1Q9BZE9 553 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 PITHD1Q9GZP4 211 aaPredicted RBP2.39□□□□□ -2.03
HIF1A-212ENST00000557538 ZMAT4Q9H898 229 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 MSL2Q9HCI7 577 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 BTBD7Q9P203 1132 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 GULP1Q9UBP9 304 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 ZKSCAN5Q9Y2L8 839 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 PCDHB4Q9Y5E5 795 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 OAS3Q9Y6K5 1087 aaKnown RBP2.39□□□□□ -2.03
HIF1A-212ENST00000557538 PTPDC1A2A3K4 754 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 H7C1D1 291 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 GAS7O60861 476 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 FKBP9O95302 570 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 MED14OSP0DP75 135 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 RBP3P10745 1247 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 PDE6AP16499 860 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 VCAM1P19320 739 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 AOAHP28039 575 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 GPR15P49685 360 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 NEK4P51957 841 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 ERVFC1P60507 584 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 ST5P78524 1137 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 PLCL1Q15111 1095 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 PLEKHN1Q494U1 663 aaPredicted RBP2.39□□□□□ -2.03
HIF1A-212ENST00000557538 SYDE2Q5VT97 1194 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 NXNQ6DKJ4 435 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 CNNM4Q6P4Q7 775 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 FKBP9P1Q75LS8 142 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 PIP4K2CQ8TBX8 421 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 WRNIP1Q96S55 665 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 NUP88Q99567 741 aaPredicted RBP2.39□□□□□ -2.03
HIF1A-212ENST00000557538 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.39□□□□□ -2.03
HIF1A-212ENST00000557538 EMC7Q9NPA0 242 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 DTLQ9NZJ0 730 aa2.39□□□□□ -2.03
HIF1A-212ENST00000557538 ACOT7O00154 380 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 FBXO21O94952 628 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 NTRK1P04629 796 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 GNAT1P11488 350 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 DBPQ10586 325 aaPredicted RBP2.38□□□□□ -2.03
HIF1A-212ENST00000557538 OSTM1Q86WC4 334 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 SLC41A1Q8IVJ1 513 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 WDR66Q8TBY9 1149 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 CHTF18Q8WVB6 975 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 USP7Q93009 1102 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 ACAP3Q96P50 834 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 MPIG6BO95866 241 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 HK2P52789 917 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 MRPS9P82933 396 aaKnown RBP2.38□□□□□ -2.03
HIF1A-212ENST00000557538 HTRA3P83110 453 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 SEC23AQ15436 765 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 TARBP2Q15633 366 aaKnown RBP2.38□□□□□ -2.03
HIF1A-212ENST00000557538 NFE2Q16621 373 aaPredicted RBP2.38□□□□□ -2.03
HIF1A-212ENST00000557538 CATSPEREQ5SY80 951 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 ZSWIM9Q86XI8 627 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 FBXO41Q8TF61 875 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 LMBR1Q8WVP7 490 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 CLEC4DQ8WXI8 215 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 SLC5A5Q92911 643 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 TOE1Q96GM8 510 aaKnown RBP2.38□□□□□ -2.03
HIF1A-212ENST00000557538 ZNF277Q9NRM2 450 aaPredicted RBP2.38□□□□□ -2.03
HIF1A-212ENST00000557538 MARCH2Q9P0N8 246 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 MYOTQ9UBF9 498 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 NUMBLQ9Y6R0 609 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 CARMIL2Q6F5E8 1435 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 OR14I1A6ND48 311 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 FAM90A27PA6NNH2 459 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.38□□□□□ -2.03
HIF1A-212ENST00000557538 GABRDO14764 452 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 NCAM1P13591 858 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 FPR2P25090 351 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 KPNA1P52294 538 aaPredicted RBP2.38□□□□□ -2.03
HIF1A-212ENST00000557538 KLF1Q13351 362 aaPredicted RBP2.38□□□□□ -2.03
HIF1A-212ENST00000557538 TUSC3Q13454 348 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 C21orf62-AS1Q17RA5 79 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms