RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 KCTD17Q8N5Z5 321 aa10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 SYT2Q8N9I0 419 aaPredicted RBP10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 ERMNQ8TAM6 284 aa10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 DDX12PQ92771 950 aa10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 DHTKD1Q96HY7 919 aaPredicted RBP10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 PURBQ96QR8 312 aaKnown RBP10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 EIF2AK1Q9BQI3 630 aaKnown RBP10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 PDCD2LQ9BRP1 358 aa10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 GTPBP4Q9BZE4 634 aaKnown RBP10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 ELP3Q9H9T3 547 aa10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 PXMP2Q9NR77 195 aa10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 HOMER2Q9NSB8 354 aa10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 IMPACTQ9P2X3 320 aa10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 CTDP1Q9Y5B0 961 aaPredicted RBP10.59□□□□□ -0.71
HNRNPC-223ENST00000556142 POTEFA5A3E0 1075 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 CBFA2T2O43439 604 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 COBLO75128 1261 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 MUTP22033 750 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 CLCN1P35523 988 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 LRCH2Q5VUJ6 765 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 SNRNP48Q6IEG0 339 aaKnown RBP10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 TTI2Q6NXR4 508 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 POTEGQ6S5H5 508 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 DYMQ7RTS9 669 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 IRF2BP1Q8IU81 584 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 DRC7Q8IY82 874 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 PROCA1Q8NCQ7 364 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 CACTINQ8WUQ7 758 aaKnown RBP10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 RIT2Q99578 217 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 DUSP9Q99956 384 aaKnown RBP10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 WDR11Q9BZH6 1224 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 UNC45AQ9H3U1 944 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 AGO4Q9HCK5 861 aaKnown RBP10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 EXOC1Q9NV70 894 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 MAPK8IP1Q9UQF2 711 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 PCDHA2Q9Y5H9 948 aa10.58□□□□□ -0.72
HNRNPC-223ENST00000556142 A0A1B0GTH6 734 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 TRIM49BA6NDI0 452 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 CNMDO75829 334 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 SERPINC1P01008 464 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 CCNE1P24864 410 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 NF2P35240 595 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 GJA5P36382 358 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 PPP1R2P41236 205 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 PSMD2Q13200 908 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 PPIL2Q13356 520 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 ARID5BQ14865 1188 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 EPHA7Q15375 998 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 HABP4Q5JVS0 413 aaKnown RBP10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 VSIG10LQ86VR7 867 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 VSTM4Q8IW00 320 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 HPS3Q969F9 1004 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 CCDC47Q96A33 483 aaKnown RBP10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 DYDC2Q96IM9 177 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 ZNF577Q9BSK1 485 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 TEX13BQ9BXU2 312 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 TUFT1Q9NNX1 390 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 KCNH7Q9NS40 1196 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 RGL1Q9NZL6 768 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 BTBD7Q9P203 1132 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 LIMA1Q9UHB6 759 aaKnown RBP10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 PYCARDQ9ULZ3 195 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 LOC285556D6RIA3 1793 aa10.57□□□□□ -0.72
HNRNPC-223ENST00000556142 IPO5O00410 1097 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 EYA4O95677 639 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 EIF2AK2P19525 551 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 PBX1P40424 430 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 COASYQ13057 564 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 TBX2Q13207 712 aaPredicted RBP10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 ITGB3BPQ13352 177 aaPredicted RBP10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 HSP90AA4PQ58FG1 418 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 CENPPQ6IPU0 288 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 GPAT2Q6NUI2 795 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 XRRA1Q6P2D8 792 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 NSMFQ6X4W1 530 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 LRRC8AQ8IWT6 810 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 OTUD5Q96G74 571 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 RMDN3Q96TC7 470 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 TEKT3Q9BXF9 490 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 SEMA6BQ9H3T3 888 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 ACAD9Q9H845 621 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 A1CFQ9NQ94 594 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 CYP39A1Q9NYL5 469 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 WRAP73Q9P2S5 460 aaPredicted RBP10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 ADD3Q9UEY8 706 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 DNM3Q9UQ16 869 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 A0A0G2JMZ2 1700 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 NPHP3-ACAD11A0A0J9YXS1 232 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 UNCXA6NJT0 531 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 PEX10O60683 326 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 GAS7O60861 476 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 CDK11BP21127 795 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 MSNP26038 577 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 LRMPQ12912 555 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 GIT2Q14161 759 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 CTTNQ14247 550 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 ANKRD40Q6AI12 368 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 ARMCX5Q6P1M9 558 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 FOXR2Q6PJQ5 311 aa10.56□□□□□ -0.72
HNRNPC-223ENST00000556142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms