RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ZHX3Q9H4I2 956 aa13.59□□□□□ -0.23
HDAC7-230ENST00000552960 ADAMTS1Q9UHI8 967 aa13.59□□□□□ -0.23
HDAC7-230ENST00000552960 LRRC37AA6NMS7 1700 aa13.59□□□□□ -0.23
HDAC7-230ENST00000552960 ECE2O60344 883 aa13.58□□□□□ -0.23
HDAC7-230ENST00000552960 LDHCP07864 332 aa13.58□□□□□ -0.23
HDAC7-230ENST00000552960 MAN2A1Q16706 1144 aa13.58□□□□□ -0.23
HDAC7-230ENST00000552960 KIAA0753Q2KHM9 967 aa13.58□□□□□ -0.23
HDAC7-230ENST00000552960 MICALCLQ6ZW33 695 aa13.58□□□□□ -0.23
HDAC7-230ENST00000552960 C7orf43Q8WVR3 580 aa13.58□□□□□ -0.23
HDAC7-230ENST00000552960 CASKIN2Q8WXE0 1202 aa13.58□□□□□ -0.23
HDAC7-230ENST00000552960 PCNTO95613 3336 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 GAKO14976 1311 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 KCNK3O14649 394 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 MARCH6O60337 910 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 PPP1R37O75864 691 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 KLRC1P26715 233 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 RBM5P52756 815 aaKnown RBP eCLIP13.58□□□□□ -0.24
HDAC7-230ENST00000552960 ACTN3Q08043 901 aaPredicted RBP13.58□□□□□ -0.24
HDAC7-230ENST00000552960 APOBEC3HQ6NTF7 200 aaKnown RBP13.58□□□□□ -0.24
HDAC7-230ENST00000552960 NLRP14Q86W24 1093 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 NELFCDQ8IXH7 590 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 TAF4BQ92750 862 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 CCDC114Q96M63 670 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 EPN3Q9H201 632 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 USP40Q9NVE5 1235 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 SCAF8Q9UPN6 1271 aaKnown RBP13.58□□□□□ -0.24
HDAC7-230ENST00000552960 ATF5Q9Y2D1 282 aaPredicted RBP13.58□□□□□ -0.24
HDAC7-230ENST00000552960 SIK3Q9Y2K2 1263 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 GOLGA6L7A0A1B0GV03 622 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 SMCO2A6NFE2 343 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 CYTH3O43739 400 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 SKOR1P84550 965 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 SLC9C1Q4G0N8 1177 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 AP1M1Q9BXS5 423 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 PACSIN1Q9BY11 444 aa13.58□□□□□ -0.24
HDAC7-230ENST00000552960 A0A1W2PQJ5 194 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 MYMKA6NI61 221 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 YDJCA8MPS7 323 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 TMCO5BA8MYB1 307 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 TMOD1P28289 359 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 EPS15P42566 896 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 CDR1P51861 262 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 SOGA3Q5TF21 947 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 CDC42EP5Q6NZY7 148 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 ZNF444Q8N0Y2 327 aaPredicted RBP13.57□□□□□ -0.24
HDAC7-230ENST00000552960 UBLCP1Q8WVY7 318 aaPredicted RBP13.57□□□□□ -0.24
HDAC7-230ENST00000552960 LSM14BQ9BX40 385 aaKnown RBP13.57□□□□□ -0.24
HDAC7-230ENST00000552960 POTEMA6NI47 508 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 RAD51CO43502 376 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 CEP104O60308 925 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 MYL1P05976 194 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 PRLRP16471 622 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 NONOQ15233 471 aaKnown RBP eCLIP13.57□□□□□ -0.244e-7■■■□□ 17.1
HDAC7-230ENST00000552960 SFMBT2Q5VUG0 894 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 ZSCAN29Q8IWY8 852 aaPredicted RBP13.57□□□□□ -0.24
HDAC7-230ENST00000552960 IQCKQ8N0W5 287 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 TBCKQ8TEA7 893 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 TBC1D22AQ8WUA7 517 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 CAVIN3Q969G5 261 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 GJA10Q969M2 543 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 SCN9AQ15858 1988 aa13.57□□□□□ -0.24
HDAC7-230ENST00000552960 CDK17Q00537 523 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
HDAC7-230ENST00000552960 PTGISQ16647 500 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 FAM133AQ8N9E0 248 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 MYCBPAPQ8TBZ2 947 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 EYA3Q99504 573 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 TMX4Q9H1E5 349 aaPredicted RBP13.56□□□□□ -0.24
HDAC7-230ENST00000552960 TMEM260Q9NX78 707 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 KLRF2D3W0D1 207 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 EPB41P11171 864 aaKnown RBP13.56□□□□□ -0.24
HDAC7-230ENST00000552960 DPEP1P16444 411 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 MDH1P40925 334 aaKnown RBP13.56□□□□□ -0.24
HDAC7-230ENST00000552960 PDXDC1Q6P996 788 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 USP17L2Q6R6M4 530 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 CCDC121Q6ZUS5 278 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 GIMAP7Q8NHV1 300 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 ATP6V1G3Q96LB4 118 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 SCLT1Q96NL6 688 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 TMEM47Q9BQJ4 181 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 TRIM31Q9BZY9 425 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 UBA5Q9GZZ9 404 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 ZNF277Q9NRM2 450 aaPredicted RBP13.56□□□□□ -0.24
HDAC7-230ENST00000552960 MAST2Q6P0Q8 1798 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 CTNNA1P35221 906 aaKnown RBP13.56□□□□□ -0.24
HDAC7-230ENST00000552960 FIGNQ5HY92 759 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 CENPPQ6IPU0 288 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 CNPY4Q8N129 248 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 PRPF38AQ8NAV1 312 aaKnown RBP13.56□□□□□ -0.24
HDAC7-230ENST00000552960 CEP95Q96GE4 821 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 FAM163AQ96GL9 167 aaPredicted RBP13.56□□□□□ -0.24
HDAC7-230ENST00000552960 TSG101Q99816 390 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 C7orf25Q9BPX7 421 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 MAD2L2Q9UI95 211 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 SNED1Q8TER0 1413 aa13.56□□□□□ -0.24
HDAC7-230ENST00000552960 GCOM1H8Y6P7 765 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-230ENST00000552960 STXBP3O00186 592 aa13.55□□□□□ -0.24
HDAC7-230ENST00000552960 TULP1O00294 542 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-230ENST00000552960 MYZAPP0CAP1 466 aa13.55□□□□□ -0.24
HDAC7-230ENST00000552960 KCNA3P22001 575 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms