RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 KCNJ6P48051 423 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 PTH1RQ03431 593 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 HDAC1Q13547 482 aaPredicted RBP7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 EP400NLQ6ZTU2 488 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 NYAP1Q6ZVC0 841 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 CHD1LQ86WJ1 897 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 SPNS2Q8IVW8 549 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 DHX37Q8IY37 1157 aaKnown RBP7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 CMTR1Q8N1G2 835 aaKnown RBP7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 C7orf31Q8N865 590 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 DNERQ8NFT8 737 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 NSUN6Q8TEA1 469 aaKnown RBP7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 ESR2Q92731 530 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 UIMC1Q96RL1 719 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 PIGSQ96S52 555 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 MYL10Q9BUA6 226 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 SUGCTQ9HAC7 445 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 DIAPH3Q9NSV4 1193 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 MRVI1Q9Y6F6 885 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 COL4A4P53420 1690 aaPredicted RBP7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 WDR19Q8NEZ3 1342 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 DOCK5Q9H7D0 1870 aa7.96□□□□□ -1.13
PRPF40B-214ENST00000551320 LINC01553A4QN01 128 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 KLRF2D3W0D1 207 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 H3BQ06 376 aaPredicted RBP7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 TREHO43280 583 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 NR1I2O75469 434 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 LGR5O75473 907 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 GGPS1O95749 300 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 PARP1P09874 1014 aaKnown RBP7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 ACTN1P12814 892 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 RXRAP19793 462 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 KCNA5P22460 613 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 THPOP40225 353 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 COPS2P61201 443 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 BFSP2Q13515 415 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 STXBP2Q15833 593 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 CLUL1Q15846 466 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 BRDTQ58F21 947 aaPredicted RBP7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 UTP14CQ5TAP6 766 aaKnown RBP7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 RNF19BQ6ZMZ0 732 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 SCUBE3Q8IX30 993 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 MYOCDQ8IZQ8 938 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 DBF4BQ8NFT6 615 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 SPATA33Q96N06 139 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 TTC14Q96N46 770 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 C11orf16Q9NQ32 467 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 PKD2L1Q9P0L9 805 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 GTF2IRD1Q9UHL9 959 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 MAD2L2Q9UI95 211 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 ABCB11O95342 1321 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 TANC1Q9C0D5 1861 aa7.96□□□□□ -1.14
PRPF40B-214ENST00000551320 NKRFO15226 690 aaKnown RBP eCLIP7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 CYTH3O43739 400 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 GSPT1P15170 499 aaKnown RBP7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 IL9P15248 144 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 CASTP20810 708 aaKnown RBP7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 UBA1P22314 1058 aaKnown RBP7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 NUCB1Q02818 461 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 SEMA3FQ13275 785 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 PGM5Q15124 567 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 SEC23AQ15436 765 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 DGKDQ16760 1214 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 TMEM259Q4ZIN3 620 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 GPATCH4Q5T3I0 446 aaKnown RBP7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 IFIT1BQ5T764 474 aaKnown RBP7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 STOX1Q6ZVD7 989 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 DGKHQ86XP1 1220 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 RNF166Q96A37 237 aaPredicted RBP7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 SLC9A7Q96T83 725 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 PDCD2LQ9BRP1 358 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 LRFN3Q9BTN0 628 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 SETD4Q9NVD3 440 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 MRPL11Q9Y3B7 192 aaKnown RBP7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 PCDHA1Q9Y5I3 950 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 RAD50Q92878 1312 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 MYH6P13533 1939 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 KIAA1217Q5T5P2 1943 aa7.95□□□□□ -1.14
PRPF40B-214ENST00000551320 MUC6Q6W4X9 2439 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 KIF28PB7ZC32 967 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 CFAP99D6REC4 459 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 HAS3O00219 553 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 EIF3JO75822 258 aaKnown RBP7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 AP1G2O75843 785 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 GJB5O95377 273 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 SMIM10L2AP0DMW4 78 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 SMIM10L2BP0DMW5 78 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 RFC2P35250 354 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 GTF2F1P35269 517 aaKnown RBP eCLIP7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 MRPS9P82933 396 aaKnown RBP7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 MCM6Q14566 821 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 ASPRV1Q53RT3 343 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 CELF3Q5SZQ8 465 aaKnown RBP7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 CNKSR3Q6P9H4 555 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 USP17L6PQ6QN14 398 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 RUFY4Q6ZNE9 571 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 CYFIP1Q7L576 1253 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 IQCA1Q86XH1 822 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 SMC5Q8IY18 1101 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 PHOSPHO2Q8TCD6 241 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms