RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 DUSP10Q9Y6W6 482 aa6.31□□□□□ -1.4
RAB3IP-214ENST00000550847 RPL13P26373 211 aaKnown RBP6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 SARSP49591 514 aaKnown RBP6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 SUMO1P63165 101 aaKnown RBP6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 NKX3-2P78367 333 aa6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 AMPD3Q01432 767 aa6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 NFIXQ14938 502 aa6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 TMC5Q6UXY8 1006 aa6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 KIAA0907Q7Z7F0 614 aaPredicted RBP6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 UHMK1Q8TAS1 419 aaKnown RBP6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 PHOSPHO1Q8TCT1 267 aa6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 ADAMTS17Q8TE56 1095 aa6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 SH3RF2Q8TEC5 729 aa6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 STAG1Q8WVM7 1258 aa6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 YIPF4Q9BSR8 244 aa6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 TYW1Q9NV66 732 aaKnown RBP6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 MRPS23Q9Y3D9 190 aaKnown RBP6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 PCDHA8Q9Y5H6 950 aa6.3□□□□□ -1.4
RAB3IP-214ENST00000550847 LOC102724159A0A0B4J2E5 919 aa6.29□□□□□ -1.4
RAB3IP-214ENST00000550847 KRIT1O00522 736 aa6.29□□□□□ -1.4
RAB3IP-214ENST00000550847 TUSC3Q13454 348 aa6.29□□□□□ -1.4
RAB3IP-214ENST00000550847 PWP2Q15269 919 aaKnown RBP6.29□□□□□ -1.4
RAB3IP-214ENST00000550847 PHF19Q5T6S3 580 aa6.29□□□□□ -1.4
RAB3IP-214ENST00000550847 CYP4F22Q6NT55 531 aa6.29□□□□□ -1.4
RAB3IP-214ENST00000550847 FRMD5Q7Z6J6 570 aa6.29□□□□□ -1.4
RAB3IP-214ENST00000550847 PTPRN2Q92932 1015 aa6.29□□□□□ -1.4
RAB3IP-214ENST00000550847 RELTQ969Z4 430 aa6.29□□□□□ -1.4
RAB3IP-214ENST00000550847 DHRS4Q9BTZ2 278 aa6.29□□□□□ -1.4
RAB3IP-214ENST00000550847 FOXD2O60548 495 aaPredicted RBP6.28□□□□□ -1.4
RAB3IP-214ENST00000550847 GNAT1P11488 350 aa6.28□□□□□ -1.4
RAB3IP-214ENST00000550847 MAMDC2Q7Z304 686 aaPredicted RBP6.28□□□□□ -1.4
RAB3IP-214ENST00000550847 HOMER1Q86YM7 354 aa6.28□□□□□ -1.4
RAB3IP-214ENST00000550847 LILRB2Q8N423 598 aa6.28□□□□□ -1.4
RAB3IP-214ENST00000550847 TTLL6Q8N841 843 aa6.28□□□□□ -1.4
RAB3IP-214ENST00000550847 JMYQ8N9B5 988 aa6.28□□□□□ -1.4
RAB3IP-214ENST00000550847 TTLL11Q8NHH1 800 aa6.28□□□□□ -1.4
RAB3IP-214ENST00000550847 PCDH19Q8TAB3 1148 aa6.28□□□□□ -1.4
RAB3IP-214ENST00000550847 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
RAB3IP-214ENST00000550847 CD244Q9BZW8 370 aa6.28□□□□□ -1.4
RAB3IP-214ENST00000550847 KANSL2Q9H9L4 492 aa6.28□□□□□ -1.4
RAB3IP-214ENST00000550847 TMEM260Q9NX78 707 aa6.28□□□□□ -1.4
RAB3IP-214ENST00000550847 NCANO14594 1321 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 ESYT3A0FGR9 886 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 FAM47E-STBD1D6RA91 191 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 ACOT7O00154 380 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 ARVCFO00192 962 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 DDX3XO00571 662 aaKnown RBP eCLIP6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 WNT9AO14904 365 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 TPD52L2O43399 206 aaKnown RBP6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 S100BP04271 92 aaPredicted RBP6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 ZNF28P17035 718 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 MLLT6P55198 1093 aaPredicted RBP6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 SPIRE1Q08AE8 756 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 TTLL7Q6ZT98 887 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 MTDHQ86UE4 582 aaKnown RBP6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 FERMT3Q86UX7 667 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 ZCCHC14Q8WYQ9 949 aaKnown RBP6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 DDX1Q92499 740 aaKnown RBP6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 TEPSINQ96N21 525 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 PDGFDQ9GZP0 370 aaPredicted RBP6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 MYH16Q9H6N6 1097 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 SLC52A2Q9HAB3 445 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 PCDH18Q9HCL0 1135 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 HSPBP1Q9NZL4 362 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 DSEQ9UL01 958 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 CBLCQ9ULV8 474 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 PCDHA9Q9Y5H5 950 aa6.27□□□□□ -1.41
RAB3IP-214ENST00000550847 CCDC194A0A1B0GVG4 234 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 PRRG2O14669 202 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 MAFKO60675 156 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 AMY2AP04746 511 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 PDGFRBP09619 1106 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 COL6A1P12109 1028 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 AMY2BP19961 511 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 BUD31P41223 144 aaPredicted RBP6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 EPHA5P54756 1037 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 GYS2P54840 703 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 PAK1Q13153 545 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 LONRF2Q1L5Z9 754 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 SKOR2Q2VWA4 1001 aaPredicted RBP6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 TAF7LQ5H9L4 462 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 MCTP2Q6DN12 878 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 CXorf38Q8TB03 319 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 SLC7A14Q8TBB6 771 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 PSMD1Q99460 953 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 ALG1Q9BT22 464 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 NGRNQ9NPE2 291 aaKnown RBP6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 USP40Q9NVE5 1235 aa6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 MAGEC2Q9UBF1 373 aaPredicted RBP6.26□□□□□ -1.41
RAB3IP-214ENST00000550847 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.25□□□□□ -1.41
RAB3IP-214ENST00000550847 B8ZZF3 427 aa6.25□□□□□ -1.41
RAB3IP-214ENST00000550847 AQP7O14520 342 aa6.25□□□□□ -1.41
RAB3IP-214ENST00000550847 RASGRP1O95267 797 aa6.25□□□□□ -1.41
RAB3IP-214ENST00000550847 CRTAMO95727 393 aa6.25□□□□□ -1.41
RAB3IP-214ENST00000550847 PYGMP11217 842 aa6.25□□□□□ -1.41
RAB3IP-214ENST00000550847 FAHP16930 419 aa6.25□□□□□ -1.41
RAB3IP-214ENST00000550847 GJA9P57773 515 aa6.25□□□□□ -1.41
RAB3IP-214ENST00000550847 GABREP78334 506 aa6.25□□□□□ -1.41
RAB3IP-214ENST00000550847 GUCY1A3Q02108 690 aa6.25□□□□□ -1.41
RAB3IP-214ENST00000550847 RGL3Q3MIN7 710 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms