RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 KCNA10Q16322 511 aa18.38■□□□□ 0.53
LIMS2-217ENST00000545738 GNASQ5JWF2 1037 aa18.38■□□□□ 0.53
LIMS2-217ENST00000545738 TEKT3Q9BXF9 490 aa18.38■□□□□ 0.53
LIMS2-217ENST00000545738 AP5M1Q9H0R1 490 aa18.38■□□□□ 0.53
LIMS2-217ENST00000545738 CHMP5Q9NZZ3 219 aa18.38■□□□□ 0.53
LIMS2-217ENST00000545738 SCN10AQ9Y5Y9 1956 aa18.38■□□□□ 0.53
LIMS2-217ENST00000545738 ELP1O95163 1332 aa18.38■□□□□ 0.53
LIMS2-217ENST00000545738 PP2D1A8MPX8 630 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 ATG7O95352 703 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 TCF7P36402 384 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-217ENST00000545738 UGCGQ16739 394 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 ABHD15Q6UXT9 468 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 CCDC60Q8IWA6 550 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-217ENST00000545738 SLFN12Q8IYM2 578 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 TNS4Q8IZW8 715 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 GIMAP8Q8ND71 665 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-217ENST00000545738 KAT2BQ92831 832 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 C16orf70Q9BSU1 422 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 PCDHA12Q9UN75 941 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 ASGR1P07306 291 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 CDC25AP30304 524 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 PURAQ00577 322 aaKnown RBP18.37■□□□□ 0.53
LIMS2-217ENST00000545738 SLC39A14Q15043 492 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 ZNF746Q6NUN9 644 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-217ENST00000545738 CXCL17Q6UXB2 119 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 TNPO1Q92973 898 aaKnown RBP18.37■□□□□ 0.53
LIMS2-217ENST00000545738 GDPD2Q9HCC8 539 aa18.37■□□□□ 0.53
LIMS2-217ENST00000545738 WRAP73Q9P2S5 460 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-217ENST00000545738 FBXO2Q9UK22 296 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-217ENST00000545738 IGKV6D-21A0A0A0MT36 114 aa18.36■□□□□ 0.53
LIMS2-217ENST00000545738 LGALS2P05162 132 aa18.36■□□□□ 0.53
LIMS2-217ENST00000545738 PRPHP41219 470 aa18.36■□□□□ 0.53
LIMS2-217ENST00000545738 KRT76Q01546 638 aa18.36■□□□□ 0.53
LIMS2-217ENST00000545738 IGSF22Q8N9C0 903 aa18.36■□□□□ 0.53
LIMS2-217ENST00000545738 CLIC6Q96NY7 704 aa18.36■□□□□ 0.53
LIMS2-217ENST00000545738 DISC1Q9NRI5 854 aa18.36■□□□□ 0.53
LIMS2-217ENST00000545738 VWA3AA6NCI4 1184 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 NOP56O00567 594 aaKnown RBP18.35■□□□□ 0.53
LIMS2-217ENST00000545738 TFRCP02786 760 aaKnown RBP18.35■□□□□ 0.53
LIMS2-217ENST00000545738 ATP4AP20648 1035 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 CPT1AP50416 773 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 FXR2P51116 673 aaKnown RBP eCLIP18.35■□□□□ 0.53
LIMS2-217ENST00000545738 SOX10P56693 466 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 NCAPH2Q6IBW4 605 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 RNF180Q86T96 592 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 SEPT1Q8WYJ6 367 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 ZNF396Q96N95 335 aaPredicted RBP18.35■□□□□ 0.53
LIMS2-217ENST00000545738 TMEM106CQ9BVX2 250 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 GRIN2DO15399 1336 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 MYH9P35579 1960 aaKnown RBP18.35■□□□□ 0.53
LIMS2-217ENST00000545738 LAD1O00515 517 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 MARCH6O60337 910 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 BAG4O95429 457 aaKnown RBP18.35■□□□□ 0.53
LIMS2-217ENST00000545738 SUPT20HL2P0C7V6 817 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 ACLYP53396 1101 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 PSMC6P62333 389 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 UTP14CQ5TAP6 766 aaKnown RBP18.35■□□□□ 0.53
LIMS2-217ENST00000545738 USP49Q70CQ1 688 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 FERMT2Q96AC1 680 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 RGL1Q9NZL6 768 aa18.35■□□□□ 0.53
LIMS2-217ENST00000545738 WDR64B1ANS9 1081 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 DNM1LO00429 736 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 ZNF862O60290 1169 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 PPFIA4O75335 1185 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 LGR5O75473 907 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 YEATS4O95619 227 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 MYL3P08590 195 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 ECM1Q16610 540 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 DGKDQ16760 1214 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 SPECC1Q5M775 1068 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 ARL6IP4Q66PJ3 421 aaKnown RBP18.34■□□□□ 0.53
LIMS2-217ENST00000545738 SWSAP1Q6NVH7 229 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 MIER3Q7Z3K6 550 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 UBE2Q1Q7Z7E8 422 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 SMAP1Q8IYB5 467 aaPredicted RBP18.34■□□□□ 0.53
LIMS2-217ENST00000545738 MMTAG2Q9BU76 263 aaKnown RBP18.34■□□□□ 0.53
LIMS2-217ENST00000545738 SPC25Q9HBM1 224 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 PCDHA10Q9Y5I2 948 aa18.34■□□□□ 0.53
LIMS2-217ENST00000545738 A0A1W2PQ45 241 aaPredicted RBP18.33■□□□□ 0.52
LIMS2-217ENST00000545738 A0A1W2PQY0 241 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 RBAK-RBAKDNI3L0D1 243 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 SPTLC2O15270 562 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 F2P00734 622 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 COL6A1P12109 1028 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 NCLP19338 710 aaKnown RBP18.33■□□□□ 0.52
LIMS2-217ENST00000545738 STK38Q15208 465 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 DTHD1Q6ZMT9 781 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 ARRDC4Q8NCT1 418 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 BANK1Q8NDB2 785 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 LEO1Q8WVC0 666 aaPredicted RBP18.33■□□□□ 0.52
LIMS2-217ENST00000545738 RCOR1Q9UKL0 485 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 PHF24Q9UPV7 400 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 SAMM50Q9Y512 469 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 MORC2Q9Y6X9 1032 aaPredicted RBP18.33■□□□□ 0.52
LIMS2-217ENST00000545738 EMSYQ7Z589 1322 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 IGSF9BQ9UPX0 1349 aa18.33■□□□□ 0.52
LIMS2-217ENST00000545738 TMEM150BA6NC51 233 aa18.32■□□□□ 0.52
LIMS2-217ENST00000545738 SPATA31C1P0DKV0 1188 aa18.32■□□□□ 0.52
LIMS2-217ENST00000545738 MARK3P27448 753 aa18.32■□□□□ 0.52
LIMS2-217ENST00000545738 CYP4A11Q02928 519 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms