RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 CDC37Q16543 378 aaPredicted RBP16.59■□□□□ 0.25
CHFR-223ENST00000544268 CEP112Q8N8E3 955 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 RHOXF2Q9BQY4 288 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 PYM1Q9BRP8 204 aaKnown RBP16.59■□□□□ 0.25
CHFR-223ENST00000544268 ACBD3Q9H3P7 528 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 SEMA6BQ9H3T3 888 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 ABCB6Q9NP58 842 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 BLOC1S4Q9NUP1 217 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 FZD1Q9UP38 647 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 MYMKA6NI61 221 aa16.58■□□□□ 0.25
CHFR-223ENST00000544268 EPHB6O15197 1021 aa16.58■□□□□ 0.25
CHFR-223ENST00000544268 SRGAP2O75044 1071 aa16.58■□□□□ 0.25
CHFR-223ENST00000544268 NDUFA10O95299 355 aa16.58■□□□□ 0.25
CHFR-223ENST00000544268 PLEKP08567 350 aaPredicted RBP16.58■□□□□ 0.25
CHFR-223ENST00000544268 TAL1P17542 331 aaPredicted RBP16.58■□□□□ 0.25
CHFR-223ENST00000544268 INPP5BP32019 993 aa16.58■□□□□ 0.25
CHFR-223ENST00000544268 SPAG1Q07617 926 aa16.58■□□□□ 0.25
CHFR-223ENST00000544268 LRRC41Q15345 812 aa16.58■□□□□ 0.25
CHFR-223ENST00000544268 FAM83BQ5T0W9 1011 aa16.58■□□□□ 0.25
CHFR-223ENST00000544268 SYDE2Q5VT97 1194 aa16.58■□□□□ 0.25
CHFR-223ENST00000544268 KRT25Q7Z3Z0 450 aa16.58■□□□□ 0.25
CHFR-223ENST00000544268 CNOT6LQ96LI5 555 aaKnown RBP16.58■□□□□ 0.25
CHFR-223ENST00000544268 PNMA5Q96PV4 448 aa16.58■□□□□ 0.25
CHFR-223ENST00000544268 VCPKMTQ9H867 229 aa16.58■□□□□ 0.25
CHFR-223ENST00000544268 EXOC1Q9NV70 894 aa16.58■□□□□ 0.25
CHFR-223ENST00000544268 EPN1Q9Y6I3 576 aaPredicted RBP16.58■□□□□ 0.25
CHFR-223ENST00000544268 ADCY7P51828 1080 aa16.58■□□□□ 0.24
CHFR-223ENST00000544268 CYP27A1Q02318 531 aa16.58■□□□□ 0.24
CHFR-223ENST00000544268 MIIPQ5JXC2 388 aa16.58■□□□□ 0.24
CHFR-223ENST00000544268 NOA1Q8NC60 698 aaKnown RBP16.58■□□□□ 0.24
CHFR-223ENST00000544268 ZNF341Q9BYN7 854 aa16.58■□□□□ 0.24
CHFR-223ENST00000544268 GBP3Q9H0R5 595 aa16.58■□□□□ 0.24
CHFR-223ENST00000544268 CDC23Q9UJX2 597 aa16.58■□□□□ 0.24
CHFR-223ENST00000544268 SUFUQ9UMX1 484 aa16.58■□□□□ 0.24
CHFR-223ENST00000544268 CTAGE9A4FU28 777 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 CTNND1O60716 968 aaKnown RBP16.57■□□□□ 0.24
CHFR-223ENST00000544268 PRPHP41219 470 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 CASP8Q14790 479 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 BTNL9Q6UXG8 535 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 P2RX5Q93086 422 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 CCDC102AQ96A19 550 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 SGSM3Q96HU1 749 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 LACRTQ9GZZ8 138 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 LUC7L2Q9Y383 392 aaKnown RBP16.57■□□□□ 0.24
CHFR-223ENST00000544268 USP8P40818 1118 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 TUBB2AQ13885 445 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 PPP1R18Q6NYC8 613 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 CCDC155Q8N6L0 562 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 OR8K1Q8NGG5 319 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 CCDC51Q96ER9 411 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 MTMR9Q96QG7 549 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 TUBB2BQ9BVA1 445 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 SH2D4AQ9H788 454 aa16.57■□□□□ 0.24
CHFR-223ENST00000544268 ADARB2Q9NS39 739 aaKnown RBP16.57■□□□□ 0.24
CHFR-223ENST00000544268 ERLIN2O94905 339 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 TUBBP07437 444 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 STAT2P52630 851 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 GPR162Q16538 588 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 CALCRLQ16602 461 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 DCAF15Q66K64 600 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 THAP9Q9H5L6 903 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 FAM204AQ9H8W3 233 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 RIC8AQ9NPQ8 531 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 PRR12Q9ULL5 1215 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 PCDHA1Q9Y5I3 950 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 TRIM21P19474 475 aaKnown RBP16.56■□□□□ 0.24
CHFR-223ENST00000544268 TBC1D8BQ0IIM8 1120 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 DLK2Q6UY11 383 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 KRT26Q7Z3Y9 468 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 PCMTD1Q96MG8 357 aaPredicted RBP16.56■□□□□ 0.24
CHFR-223ENST00000544268 DNAJC7Q99615 494 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 HINFPQ9BQA5 517 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 FGFBP2Q9BYJ0 223 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 TTYH3Q9C0H2 523 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 MAGEC2Q9UBF1 373 aaPredicted RBP16.56■□□□□ 0.24
CHFR-223ENST00000544268 LRWD1Q9UFC0 647 aa16.56■□□□□ 0.24
CHFR-223ENST00000544268 LAD1O00515 517 aa16.55■□□□□ 0.24
CHFR-223ENST00000544268 MTIF2P46199 727 aaKnown RBP16.55■□□□□ 0.24
CHFR-223ENST00000544268 ZKSCAN4Q969J2 545 aaPredicted RBP16.55■□□□□ 0.24
CHFR-223ENST00000544268 WRNIP1Q96S55 665 aa16.55■□□□□ 0.24
CHFR-223ENST00000544268 C7orf25Q9BPX7 421 aa16.55■□□□□ 0.24
CHFR-223ENST00000544268 CAPN11Q9UMQ6 739 aa16.55■□□□□ 0.24
CHFR-223ENST00000544268 ATP1A1P05023 1023 aaKnown RBP16.55■□□□□ 0.24
CHFR-223ENST00000544268 IDEP14735 1019 aa16.55■□□□□ 0.24
CHFR-223ENST00000544268 CCNE1P24864 410 aa16.55■□□□□ 0.24
CHFR-223ENST00000544268 EEF1GP26641 437 aaKnown RBP16.55■□□□□ 0.24
CHFR-223ENST00000544268 MNAT1P51948 309 aa16.55■□□□□ 0.24
CHFR-223ENST00000544268 CACNB1Q02641 598 aaPredicted RBP16.55■□□□□ 0.24
CHFR-223ENST00000544268 DGKZQ13574 1117 aa16.55■□□□□ 0.24
CHFR-223ENST00000544268 STIM1Q13586 685 aa16.55■□□□□ 0.24
CHFR-223ENST00000544268 SMCR8Q8TEV9 937 aaPredicted RBP16.55■□□□□ 0.24
CHFR-223ENST00000544268 NAPGQ99747 312 aaPredicted RBP16.55■□□□□ 0.24
CHFR-223ENST00000544268 NOC4LQ9BVI4 516 aaKnown RBP16.55■□□□□ 0.24
CHFR-223ENST00000544268 PSTPIP2Q9H939 334 aa16.55■□□□□ 0.24
CHFR-223ENST00000544268 ZNF112Q9UJU3 913 aa16.55■□□□□ 0.24
CHFR-223ENST00000544268 SSC5DA1L4H1 1573 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 HNRNPH1P31943 449 aaKnown RBP16.54■□□□□ 0.24
CHFR-223ENST00000544268 USH1GQ495M9 461 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 CUL5Q93034 780 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 TBC1D7Q9P0N9 293 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms