RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 EIF3CLB5ME19 914 aaKnown RBP16.32■□□□□ 0.2
DDX55-209ENST00000542286 EML1O00423 815 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 AKR1B10O60218 316 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 PHACTR2O75167 634 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 PRPF6O94906 941 aaKnown RBP16.32■□□□□ 0.2
DDX55-209ENST00000542286 EZH2Q15910 746 aaKnown RBP16.32■□□□□ 0.2
DDX55-209ENST00000542286 TDRD12Q587J7 1177 aaKnown RBP16.32■□□□□ 0.2
DDX55-209ENST00000542286 BEND6Q5SZJ8 279 aaPredicted RBP16.32■□□□□ 0.2
DDX55-209ENST00000542286 PPP1R18Q6NYC8 613 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 TRMT1LQ7Z2T5 733 aaKnown RBP16.32■□□□□ 0.2
DDX55-209ENST00000542286 HDXQ7Z353 690 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 CACNA2D4Q7Z3S7 1137 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 BAP1Q92560 729 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 CCDC17Q96LX7 622 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 EIF3CQ99613 913 aaKnown RBP16.32■□□□□ 0.2
DDX55-209ENST00000542286 IFIH1Q9BYX4 1025 aaKnown RBP16.32■□□□□ 0.2
DDX55-209ENST00000542286 GLIS2Q9BZE0 524 aaPredicted RBP16.32■□□□□ 0.2
DDX55-209ENST00000542286 EHD4Q9H223 541 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 PCDHA2Q9Y5H9 948 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 SAR1BQ9Y6B6 198 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 PSMD14O00487 310 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 PPIP5K2O43314 1243 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 IPO7O95373 1038 aaKnown RBP16.31■□□□□ 0.2
DDX55-209ENST00000542286 CFBP00751 764 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 POLR2FP61218 127 aaKnown RBP16.31■□□□□ 0.2
DDX55-209ENST00000542286 SPIRE1Q08AE8 756 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 ZCWPW2Q504Y3 356 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 FBXO11Q86XK2 927 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 COG1Q8WTW3 980 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 LSM14BQ9BX40 385 aaKnown RBP16.31■□□□□ 0.2
DDX55-209ENST00000542286 FAN1Q9Y2M0 1017 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 KRT86O43790 486 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 SPATA31C1P0DKV0 1188 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 MYBP10242 640 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 KRT83P78385 493 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 RASSF7Q02833 373 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 DGKZQ13574 1117 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 SYDE2Q5VT97 1194 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 TATDN1Q6P1N9 297 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 ETNPPLQ8TBG4 499 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 NUP58Q9BVL2 599 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 AMNQ9BXJ7 453 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 PKD2L1Q9P0L9 805 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 NYAP2Q9P242 653 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 PLAGL2Q9UPG8 496 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 PCDHA13Q9Y5I0 950 aa16.31■□□□□ 0.2
DDX55-209ENST00000542286 MSH4O15457 936 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 TLR2O60603 784 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 NOL4O94818 638 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 GUCY2CP25092 1073 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 CTTNQ14247 550 aaKnown RBP16.3■□□□□ 0.2
DDX55-209ENST00000542286 NFRKBQ6P4R8 1299 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 SFR1Q86XK3 245 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 CAGE1Q8TC20 777 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 HNRNPLLQ8WVV9 542 aaKnown RBP16.3■□□□□ 0.2
DDX55-209ENST00000542286 REEP2Q9BRK0 252 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 IDI2Q9BXS1 227 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 EMILIN3Q9NT22 766 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 FBXO28Q9NVF7 368 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 COL4A3BPQ9Y5P4 624 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 SPDYE3A6NKU9 549 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 ANKRD65E5RJM6 399 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 TULP1O00294 542 aaPredicted RBP16.3■□□□□ 0.2
DDX55-209ENST00000542286 RPS6KA5O75582 802 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 BMP3P12645 472 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 SLC12A3P55017 1021 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 KIF5AQ12840 1032 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 ORC2Q13416 577 aaPredicted RBP16.3■□□□□ 0.2
DDX55-209ENST00000542286 SPA17Q15506 151 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 FAM83BQ5T0W9 1011 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 MKL1Q969V6 931 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 TSG101Q99816 390 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 BHMT2Q9H2M3 363 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 DHX36Q9H2U1 1008 aaKnown RBP16.3■□□□□ 0.2
DDX55-209ENST00000542286 VEZTQ9HBM0 779 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 PRR12Q9ULL5 1215 aa16.3■□□□□ 0.2
DDX55-209ENST00000542286 GREB1LQ9C091 1923 aaPredicted RBP16.3■□□□□ 0.2
DDX55-209ENST00000542286 QSER1Q2KHR3 1735 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 LOC102724159A0A0B4J2E5 919 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 CLIC2O15247 247 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 MYBL2P10244 700 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 VAV2P52735 878 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 LRRC63Q05C16 580 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 PWP2Q15269 919 aaKnown RBP16.29■□□□□ 0.2
DDX55-209ENST00000542286 WHAMMP3Q1A5X7 153 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 TMEM179Q6ZVK1 233 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 DCAF4Q8WV16 495 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 SECISBP2LQ93073 1101 aaKnown RBP16.29■□□□□ 0.2
DDX55-209ENST00000542286 RUSC1Q9BVN2 902 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 BMP2KQ9NSY1 1161 aaPredicted RBP16.29■□□□□ 0.2
DDX55-209ENST00000542286 BCS1LQ9Y276 419 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 EIF3JO75822 258 aaKnown RBP16.29■□□□□ 0.2
DDX55-209ENST00000542286 HOXD13P35453 343 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 ZNF76P36508 570 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 FKBP3Q00688 224 aaKnown RBP16.29■□□□□ 0.2
DDX55-209ENST00000542286 ADAM9Q13443 819 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 RBM26Q5T8P6 1007 aaKnown RBP16.29■□□□□ 0.2
DDX55-209ENST00000542286 HDAC7Q8WUI4 952 aa16.29■□□□□ 0.2
DDX55-209ENST00000542286 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.29■□□□□ 0.2
DDX55-209ENST00000542286 MYO3BQ8WXR4 1341 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms