RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 MATR3P43243 847 aaKnown RBP eCLIP12.74□□□□□ -0.37
C11orf54-214ENST00000540113 USP14P54578 494 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 CASP8Q14790 479 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 ZCWPW2Q504Y3 356 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 COG1Q8WTW3 980 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 MBOAT7Q96N66 472 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 COL4A3BPQ9Y5P4 624 aa12.74□□□□□ -0.37
C11orf54-214ENST00000540113 COL2A1P02458 1487 aaPredicted RBP12.74□□□□□ -0.37
C11orf54-214ENST00000540113 A0A1W2PRG0 241 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 PPIP5K2O43314 1243 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 DNA2P51530 1060 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 RASSF7Q02833 373 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 CYP4A11Q02928 519 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 PSMD2Q13200 908 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 PABPC4Q13310 644 aaKnown RBP eCLIP12.73□□□□□ -0.37
C11orf54-214ENST00000540113 TDRD12Q587J7 1177 aaKnown RBP12.73□□□□□ -0.37
C11orf54-214ENST00000540113 HYIQ5T013 277 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 NFRKBQ6P4R8 1299 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
C11orf54-214ENST00000540113 SCFD1Q8WVM8 642 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 GMCL1Q96IK5 515 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 PURBQ96QR8 312 aaKnown RBP12.73□□□□□ -0.37
C11orf54-214ENST00000540113 LSM14BQ9BX40 385 aaKnown RBP12.73□□□□□ -0.37
C11orf54-214ENST00000540113 VPS18Q9P253 973 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 PCDHA2Q9Y5H9 948 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 CYP3A7-CYP3A51PA0A087WV96 503 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 FAM86B1E9PN63 330 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 C21orf2O43822 256 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 NOL4O94818 638 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 FAM86B2P0C5J1 330 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 MYBL2P10244 700 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 CYP3A7P24462 503 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 POLR2FP61218 127 aaKnown RBP12.73□□□□□ -0.37
C11orf54-214ENST00000540113 ARHGAP4P98171 946 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 FKBP3Q00688 224 aaKnown RBP12.73□□□□□ -0.37
C11orf54-214ENST00000540113 PDXDC1Q6P996 788 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 CATSPER3Q86XQ3 398 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 DNAAF5Q86Y56 855 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 SLC16A10Q8TF71 515 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 PDGFDQ9GZP0 370 aaPredicted RBP12.73□□□□□ -0.37
C11orf54-214ENST00000540113 SH2D4AQ9H788 454 aa12.73□□□□□ -0.37
C11orf54-214ENST00000540113 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
C11orf54-214ENST00000540113 OPLAHO14841 1288 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 TLR2O60603 784 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 FGFR1OPO95684 399 aaKnown RBP12.72□□□□□ -0.37
C11orf54-214ENST00000540113 MAGEA1P43355 309 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 TNNT3P45378 269 aaPredicted RBP12.72□□□□□ -0.37
C11orf54-214ENST00000540113 SYDE2Q5VT97 1194 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 CCDC102AQ96A19 550 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 CSRNP1Q96S65 589 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 IKZF4Q9H2S9 585 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 EMILIN3Q9NT22 766 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.72□□□□□ -0.37
C11orf54-214ENST00000540113 FAM170AA1A519 330 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 RSPH10B2B2RC85 870 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 RSPH10BP0C881 870 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 HNRNPH3P31942 346 aaKnown RBP12.72□□□□□ -0.37
C11orf54-214ENST00000540113 USP11P51784 963 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 NAP1L1P55209 391 aaKnown RBP12.72□□□□□ -0.37
C11orf54-214ENST00000540113 CDK17Q00537 523 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 KIAA1755Q5JYT7 1200 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 HGSNATQ68CP4 663 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 CC2D2BQ6DHV5 1058 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 CCDC84Q86UT8 332 aaPredicted RBP12.72□□□□□ -0.37
C11orf54-214ENST00000540113 CCDC65Q8IXS2 484 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 HDAC7Q8WUI4 952 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 AMNQ9BXJ7 453 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 LRRC27Q9C0I9 530 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 NT5C3AQ9H0P0 336 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 GLT8D2Q9H1C3 349 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 PLEKHA4Q9H4M7 779 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 ADAM21Q9UKJ8 722 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 FAN1Q9Y2M0 1017 aa12.72□□□□□ -0.37
C11orf54-214ENST00000540113 SFI1A8K8P3 1242 aa12.71□□□□□ -0.37
C11orf54-214ENST00000540113 USO1O60763 962 aaKnown RBP12.71□□□□□ -0.37
C11orf54-214ENST00000540113 ACTN1P12814 892 aa12.71□□□□□ -0.37
C11orf54-214ENST00000540113 SLC12A3P55017 1021 aa12.71□□□□□ -0.37
C11orf54-214ENST00000540113 UBXN2AP68543 259 aa12.71□□□□□ -0.37
C11orf54-214ENST00000540113 SPIRE1Q08AE8 756 aa12.71□□□□□ -0.37
C11orf54-214ENST00000540113 ADAM9Q13443 819 aa12.71□□□□□ -0.37
C11orf54-214ENST00000540113 RBM26Q5T8P6 1007 aaKnown RBP12.71□□□□□ -0.37
C11orf54-214ENST00000540113 ZNF662Q6ZS27 426 aa12.71□□□□□ -0.37
C11orf54-214ENST00000540113 ETNPPLQ8TBG4 499 aa12.71□□□□□ -0.37
C11orf54-214ENST00000540113 TBC1D5Q92609 795 aa12.71□□□□□ -0.37
C11orf54-214ENST00000540113 LENG9Q96B70 501 aa12.71□□□□□ -0.37
C11orf54-214ENST00000540113 NAP1L4Q99733 375 aaKnown RBP12.71□□□□□ -0.37
C11orf54-214ENST00000540113 KCTD10Q9H3F6 313 aa12.71□□□□□ -0.37
C11orf54-214ENST00000540113 KDM3AQ9Y4C1 1321 aa12.71□□□□□ -0.37
C11orf54-214ENST00000540113 CLRN2A0PK11 232 aa12.71□□□□□ -0.38
C11orf54-214ENST00000540113 TCP10L2B9ZVM9 353 aa12.71□□□□□ -0.38
C11orf54-214ENST00000540113 PRPF6O94906 941 aaKnown RBP12.71□□□□□ -0.38
C11orf54-214ENST00000540113 BMP3P12645 472 aa12.71□□□□□ -0.38
C11orf54-214ENST00000540113 ECE1P42892 770 aa12.71□□□□□ -0.38
C11orf54-214ENST00000540113 MMP14P50281 582 aa12.71□□□□□ -0.38
C11orf54-214ENST00000540113 SLC7A5Q01650 507 aa12.71□□□□□ -0.38
C11orf54-214ENST00000540113 AP3B2Q13367 1082 aa12.71□□□□□ -0.38
C11orf54-214ENST00000540113 FAM83BQ5T0W9 1011 aa12.71□□□□□ -0.38
C11orf54-214ENST00000540113 BTNL9Q6UXG8 535 aa12.71□□□□□ -0.38
C11orf54-214ENST00000540113 FBXO11Q86XK2 927 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 403.1 ms