RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ADGRA3Q8IWK6 1321 aa16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 C19orf67A6NJJ6 358 aa16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 SPATA31C2B4DYI2 1134 aa16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 HIP1O00291 1037 aa16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 DLX2Q07687 328 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 HYAL1Q12794 435 aa16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 TRAF1Q13077 416 aa16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 GRM4Q14833 912 aa16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 HFE2Q6ZVN8 426 aa16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 CHD1LQ86WJ1 897 aa16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 IL25Q9H293 177 aa16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 RIOX1Q9H6W3 641 aa16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 KIAA1671Q9BY89 1806 aa16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 FRMPD4Q14CM0 1322 aa16.19■□□□□ 0.18
SMARCA4-206ENST00000538456 PNMA6FA0A0J9YX94 578 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 C5orf67F2Z3F1 127 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 FIBPO43427 364 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 CYTH3O43739 400 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 CHRNA1P02708 482 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 ICAM3P32942 547 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 GTF2F1P35269 517 aaKnown RBP eCLIP16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 BMPR1AP36894 532 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 ADAM17P78536 824 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 FAM26DQ5JW98 314 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 RUFY4Q6ZNE9 571 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 SMC5Q8IY18 1101 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 OSBPL3Q9H4L5 887 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 IGFLR1Q9H665 355 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 SENP2Q9HC62 589 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 MUTYHQ9UIF7 546 aa16.18■□□□□ 0.18
SMARCA4-206ENST00000538456 LINC01565O15544 149 aa16.17■□□□□ 0.18
SMARCA4-206ENST00000538456 NCK2O43639 380 aa16.17■□□□□ 0.18
SMARCA4-206ENST00000538456 TBX10O75333 385 aa16.17■□□□□ 0.18
SMARCA4-206ENST00000538456 STAM2O75886 525 aa16.17■□□□□ 0.18
SMARCA4-206ENST00000538456 LINC00271P0C7V0 271 aa16.17■□□□□ 0.18
SMARCA4-206ENST00000538456 BTG3Q14201 252 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-206ENST00000538456 SMAD2Q15796 467 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-206ENST00000538456 CTC1Q2NKJ3 1217 aa16.17■□□□□ 0.18
SMARCA4-206ENST00000538456 UPF3BQ9BZI7 483 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-206ENST00000538456 RWDD3Q9Y3V2 267 aa16.17■□□□□ 0.18
SMARCA4-206ENST00000538456 TTC3P53804 2025 aa16.17■□□□□ 0.18
SMARCA4-206ENST00000538456 NRCAMQ92823 1304 aa16.17■□□□□ 0.18
SMARCA4-206ENST00000538456 TECTAO75443 2155 aa16.16■□□□□ 0.18
SMARCA4-206ENST00000538456 IFIT3O14879 490 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-206ENST00000538456 MBTPS2O43462 519 aa16.16■□□□□ 0.18
SMARCA4-206ENST00000538456 RB1P06400 928 aa16.16■□□□□ 0.18
SMARCA4-206ENST00000538456 MARK3P27448 753 aa16.16■□□□□ 0.18
SMARCA4-206ENST00000538456 TRDNQ13061 729 aa16.16■□□□□ 0.18
SMARCA4-206ENST00000538456 LPIN1Q14693 890 aa16.16■□□□□ 0.18
SMARCA4-206ENST00000538456 SMARCC2Q8TAQ2 1214 aa16.16■□□□□ 0.18
SMARCA4-206ENST00000538456 POP1Q99575 1024 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-206ENST00000538456 LMAN2LQ9H0V9 348 aa16.16■□□□□ 0.18
SMARCA4-206ENST00000538456 RC3H2Q9HBD1 1191 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-206ENST00000538456 ALG13Q9NP73 1137 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-206ENST00000538456 LOXHD1Q8IVV2 1947 aa16.15■□□□□ 0.18
SMARCA4-206ENST00000538456 ERICH2A1L162 156 aa16.15■□□□□ 0.18
SMARCA4-206ENST00000538456 TCF7P36402 384 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-206ENST00000538456 NUCB1Q02818 461 aa16.15■□□□□ 0.18
SMARCA4-206ENST00000538456 PPFIA1Q13136 1202 aa16.15■□□□□ 0.18
SMARCA4-206ENST00000538456 USP17L6PQ6QN14 398 aa16.15■□□□□ 0.18
SMARCA4-206ENST00000538456 CLP1Q92989 425 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-206ENST00000538456 RWDD1Q9H446 243 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-206ENST00000538456 EHMT1Q9H9B1 1298 aa16.15■□□□□ 0.18
SMARCA4-206ENST00000538456 TUBE1Q9UJT0 475 aa16.15■□□□□ 0.18
SMARCA4-206ENST00000538456 STXBP3O00186 592 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 ENPP3O14638 875 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 MMP1P03956 469 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 NDUFV1P49821 464 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 MGAT3Q09327 533 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 TROAPQ12815 778 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 SMAD4Q13485 552 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 WTAPQ15007 396 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 PCNX4Q63HM2 1172 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 TAF2Q6P1X5 1199 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 RSPH3Q86UC2 560 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 RNF135Q8IUD6 432 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 DNAJB3Q8WWF6 145 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 KCNH6Q9H252 994 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 PKD2L1Q9P0L9 805 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 CD207Q9UJ71 328 aa16.14■□□□□ 0.17
SMARCA4-206ENST00000538456 IGHDP01880 384 aa16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 IGBP1P78318 339 aa16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 GRIK4Q16099 956 aa16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 HERC4Q5GLZ8 1057 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 FBXO47Q5MNV8 452 aa16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 RALYLQ86SE5 291 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 NLRX1Q86UT6 975 aa16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 CUL5Q93034 780 aa16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 ZNF689Q96CS4 500 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 ZBTB10Q96DT7 871 aa16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 MFSD14AQ96MC6 490 aa16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 SENP7Q9BQF6 1050 aa16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 FAM49AQ9H0Q0 323 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 PLAGL2Q9UPG8 496 aa16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 CDY2AQ9Y6F7 541 aa16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 MRPL42Q9Y6G3 142 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-206ENST00000538456 ATP9AO75110 1047 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 DGKIO75912 1065 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 CYP21A2P08686 494 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 DNAJB1P25685 340 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms