RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 ZNF213O14771 459 aa22.63■■□□□ 1.21
LRP6-202ENST00000535731 KDM4AO75164 1064 aa22.63■■□□□ 1.21
LRP6-202ENST00000535731 CHRNA1P02708 482 aa22.63■■□□□ 1.21
LRP6-202ENST00000535731 HOXA13P31271 388 aaPredicted RBP22.63■■□□□ 1.21
LRP6-202ENST00000535731 RRP1P56182 461 aaKnown RBP22.63■■□□□ 1.21
LRP6-202ENST00000535731 COASYQ13057 564 aa22.63■■□□□ 1.21
LRP6-202ENST00000535731 NEDD9Q14511 834 aa22.63■■□□□ 1.21
LRP6-202ENST00000535731 EFHBQ8N7U6 833 aa22.63■■□□□ 1.21
LRP6-202ENST00000535731 SMRP1Q8NCR6 262 aa22.63■■□□□ 1.21
LRP6-202ENST00000535731 ZFP91Q96JP5 570 aaPredicted RBP22.63■■□□□ 1.21
LRP6-202ENST00000535731 CLEC1BQ9P126 229 aa22.63■■□□□ 1.21
LRP6-202ENST00000535731 ZBTB47Q9UFB7 747 aaPredicted RBP22.63■■□□□ 1.21
LRP6-202ENST00000535731 PCDHA1Q9Y5I3 950 aa22.63■■□□□ 1.21
LRP6-202ENST00000535731 C5orf42Q9H799 3197 aa22.63■■□□□ 1.21
LRP6-202ENST00000535731 TRIM6-TRIM34B2RNG4 842 aa22.62■■□□□ 1.21
LRP6-202ENST00000535731 GFRA3O60609 400 aa22.62■■□□□ 1.21
LRP6-202ENST00000535731 GHRP10912 638 aa22.62■■□□□ 1.21
LRP6-202ENST00000535731 ARHGAP4P98171 946 aa22.62■■□□□ 1.21
LRP6-202ENST00000535731 FOXK2Q01167 660 aa22.62■■□□□ 1.21
LRP6-202ENST00000535731 NMIQ13287 307 aaPredicted RBP22.62■■□□□ 1.21
LRP6-202ENST00000535731 ZNF215Q9UL58 517 aaPredicted RBP22.62■■□□□ 1.21
LRP6-202ENST00000535731 PCDHB15Q9Y5E8 787 aa22.62■■□□□ 1.21
LRP6-202ENST00000535731 GCOM1H8Y6P7 765 aaPredicted RBP22.61■■□□□ 1.21
LRP6-202ENST00000535731 ZBTB5O15062 677 aa22.61■■□□□ 1.21
LRP6-202ENST00000535731 DGKIO75912 1065 aa22.61■■□□□ 1.21
LRP6-202ENST00000535731 CSPG5O95196 566 aa22.61■■□□□ 1.21
LRP6-202ENST00000535731 POLR2MP0CAP2 368 aa22.61■■□□□ 1.21
LRP6-202ENST00000535731 ICAM3P32942 547 aa22.61■■□□□ 1.21
LRP6-202ENST00000535731 SIGLEC14Q08ET2 396 aa22.61■■□□□ 1.21
LRP6-202ENST00000535731 GNPTABQ3T906 1256 aa22.61■■□□□ 1.21
LRP6-202ENST00000535731 METTL7BQ6UX53 244 aa22.61■■□□□ 1.21
LRP6-202ENST00000535731 CYFIP1Q7L576 1253 aa22.61■■□□□ 1.21
LRP6-202ENST00000535731 ENAHQ8N8S7 591 aaPredicted RBP22.61■■□□□ 1.21
LRP6-202ENST00000535731 SPPL3Q8TCT6 385 aa22.61■■□□□ 1.21
LRP6-202ENST00000535731 MTMR8Q96EF0 704 aa22.61■■□□□ 1.21
LRP6-202ENST00000535731 GPR20Q99678 358 aa22.61■■□□□ 1.21
LRP6-202ENST00000535731 NRCAMQ92823 1304 aa22.6■■□□□ 1.21
LRP6-202ENST00000535731 PPP1R11O60927 126 aaPredicted RBP22.6■■□□□ 1.21
LRP6-202ENST00000535731 PDE1AP54750 535 aa22.6■■□□□ 1.21
LRP6-202ENST00000535731 MFAP1P55081 439 aaKnown RBP22.6■■□□□ 1.21
LRP6-202ENST00000535731 TRAF1Q13077 416 aa22.6■■□□□ 1.21
LRP6-202ENST00000535731 STAG2Q8N3U4 1231 aa22.6■■□□□ 1.21
LRP6-202ENST00000535731 LMBR1Q8WVP7 490 aa22.6■■□□□ 1.21
LRP6-202ENST00000535731 PHF7Q9BWX1 381 aaPredicted RBP22.6■■□□□ 1.21
LRP6-202ENST00000535731 ZSWIM5Q9P217 1185 aa22.6■■□□□ 1.21
LRP6-202ENST00000535731 SPATA31C2B4DYI2 1134 aa22.59■■□□□ 1.21
LRP6-202ENST00000535731 STAM2O75886 525 aa22.59■■□□□ 1.21
LRP6-202ENST00000535731 ITGB1P05556 798 aa22.59■■□□□ 1.21
LRP6-202ENST00000535731 CENPBP07199 599 aaPredicted RBP22.59■■□□□ 1.21
LRP6-202ENST00000535731 DNAJB1P25685 340 aa22.59■■□□□ 1.21
LRP6-202ENST00000535731 AVPR2P30518 371 aa22.59■■□□□ 1.21
LRP6-202ENST00000535731 LPIN1Q14693 890 aa22.59■■□□□ 1.21
LRP6-202ENST00000535731 ANKRD45Q5TZF3 282 aa22.59■■□□□ 1.21
LRP6-202ENST00000535731 TAF2Q6P1X5 1199 aa22.59■■□□□ 1.21
LRP6-202ENST00000535731 RSPH3Q86UC2 560 aa22.59■■□□□ 1.21
LRP6-202ENST00000535731 FCHSD1Q86WN1 690 aa22.59■■□□□ 1.21
LRP6-202ENST00000535731 FAM86C1Q9NVL1 165 aa22.59■■□□□ 1.21
LRP6-202ENST00000535731 B4E1Z4 1266 aa22.58■■□□□ 1.21
LRP6-202ENST00000535731 KLRF2D3W0D1 207 aa22.58■■□□□ 1.21
LRP6-202ENST00000535731 MGAT3Q09327 533 aa22.58■■□□□ 1.21
LRP6-202ENST00000535731 UTP14CQ5TAP6 766 aaKnown RBP22.58■■□□□ 1.21
LRP6-202ENST00000535731 ADGRD2Q7Z7M1 963 aa22.58■■□□□ 1.21
LRP6-202ENST00000535731 ATOH1Q92858 354 aaPredicted RBP22.58■■□□□ 1.21
LRP6-202ENST00000535731 INPP4AQ96PE3 977 aaPredicted RBP22.58■■□□□ 1.21
LRP6-202ENST00000535731 USP15Q9Y4E8 981 aaPredicted RBP22.58■■□□□ 1.21
LRP6-202ENST00000535731 SUPT16HQ9Y5B9 1047 aaKnown RBP22.58■■□□□ 1.21
LRP6-202ENST00000535731 USP34Q70CQ2 3546 aa22.57■■□□□ 1.2
LRP6-202ENST00000535731 NRIP1P48552 1158 aa22.57■■□□□ 1.2
LRP6-202ENST00000535731 MRPS9P82933 396 aaKnown RBP22.57■■□□□ 1.2
LRP6-202ENST00000535731 TRIM50Q86XT4 487 aa22.57■■□□□ 1.2
LRP6-202ENST00000535731 CMTR2Q8IYT2 770 aaKnown RBP22.57■■□□□ 1.2
LRP6-202ENST00000535731 KLHL23Q8NBE8 558 aa22.57■■□□□ 1.2
LRP6-202ENST00000535731 MRPL42Q9Y6G3 142 aaKnown RBP22.57■■□□□ 1.2
LRP6-202ENST00000535731 FIBPO43427 364 aa22.56■■□□□ 1.2
LRP6-202ENST00000535731 VCPP55072 806 aaKnown RBP22.56■■□□□ 1.2
LRP6-202ENST00000535731 FBXO47Q5MNV8 452 aa22.56■■□□□ 1.2
LRP6-202ENST00000535731 RUFY4Q6ZNE9 571 aa22.56■■□□□ 1.2
LRP6-202ENST00000535731 RBM23Q86U06 439 aaKnown RBP22.56■■□□□ 1.2
LRP6-202ENST00000535731 POF1BQ8WVV4 589 aa22.56■■□□□ 1.2
LRP6-202ENST00000535731 ASIC4Q96FT7 647 aa22.56■■□□□ 1.2
LRP6-202ENST00000535731 RPGRIP1Q96KN7 1286 aa22.56■■□□□ 1.2
LRP6-202ENST00000535731 ATG2AQ2TAZ0 1938 aa22.56■■□□□ 1.2
LRP6-202ENST00000535731 ATF7P17544 494 aaPredicted RBP22.55■■□□□ 1.2
LRP6-202ENST00000535731 NUBP1P53384 320 aa22.55■■□□□ 1.2
LRP6-202ENST00000535731 SEMA3FQ13275 785 aa22.55■■□□□ 1.2
LRP6-202ENST00000535731 TSHZ1Q6ZSZ6 1077 aa22.55■■□□□ 1.2
LRP6-202ENST00000535731 CRIPAKQ8N1N5 446 aa22.55■■□□□ 1.2
LRP6-202ENST00000535731 SENP7Q9BQF6 1050 aa22.55■■□□□ 1.2
LRP6-202ENST00000535731 RTEL1Q9NZ71 1219 aa22.55■■□□□ 1.2
LRP6-202ENST00000535731 MAD2L2Q9UI95 211 aa22.55■■□□□ 1.2
LRP6-202ENST00000535731 BARX2Q9UMQ3 279 aaPredicted RBP22.55■■□□□ 1.2
LRP6-202ENST00000535731 GLP2RO95838 553 aa22.54■■□□□ 1.2
LRP6-202ENST00000535731 IFIT1BQ5T764 474 aaKnown RBP22.54■■□□□ 1.2
LRP6-202ENST00000535731 RTN4RL1Q86UN2 441 aaPredicted RBP22.54■■□□□ 1.2
LRP6-202ENST00000535731 NPAS4Q8IUM7 802 aa22.54■■□□□ 1.2
LRP6-202ENST00000535731 UBAC1Q9BSL1 405 aa22.54■■□□□ 1.2
LRP6-202ENST00000535731 KRT23Q9C075 422 aa22.54■■□□□ 1.2
LRP6-202ENST00000535731 TLE6Q9H808 572 aa22.54■■□□□ 1.2
LRP6-202ENST00000535731 TTC3P53804 2025 aa22.53■■□□□ 1.2
LRP6-202ENST00000535731 MYH6P13533 1939 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms